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The map label for this gene is 54292988

Identifier: 54292988

GI number: 54292988

Start: 30316

End: 30858

Strand: Reverse

Name: 54292988

Synonym: lpl0024

Alternate gene names: NA

Gene position: 30858-30316 (Counterclockwise)

Preceding gene: 54292989

Following gene: 54292983

Centisome position: 0.92

GC content: 38.49

Gene sequence:

>543_bases
ATGAAACCGTTTATTGAGCAAGCTCAATTCTATGCAACCTACCACCAAAACCAGGCAACACGTTATACACATATGGCAGG
AGTCCCGTTAATCATGCTTTCTATCATGATTTTTCTGGGATTTGTTAAAATAGTTATTCCAGGTGTTTATGCAACCGATC
TTGCTTGTTTGGCTACGCTTGCCGCCCTTATTTATTACTTCCTGTTAAACTGGCAACTTGCCTTGGCATTAACTCCCATT
TTGATCTTTTTGTTATGGCTGGCCAGTTGGTTTAACTATGATGGCCCAACGAAATTCGGACTTTGGGTATTTATTATTAC
TTTTGTTGTAGGCTGGGGATTGCAATTTTACGGTCATTTTATTGAAGGAAAAAAACCTGCCTTTATGGTTAATTTTACCC
AAGCCCTTATTGCGCCTTTGTATTTAACAGCGGAATTGTTCTTTATGGCAGGACTCATGAGTTCCCTGAGAGAACAAATT
TACGGGAACGAAGAAGTAAATACTGAAGAAACAAGCAAAACCAAAACAAAATCCAAATCTTAG

Upstream 100 bases:

>100_bases
TGATTTAACGAATAGTTAAGAGCTCTTCCTCTCTTTTTGGTACTTCTTTATTTTATGTGCTATGTTTTCTTCATGACCCT
AACTTCAGGACGAAAAGAAA

Downstream 100 bases:

>100_bases
AGAGAGTCGAGCTTCACGCTTATGAAAGGGAAGCTCGGCAAGAGATCTAATAATAAATAACTGAATTATTCAGTTATCCG
CAAAATGCGGCATTACAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKPFIEQAQFYATYHQNQATRYTHMAGVPLIMLSIMIFLGFVKIVIPGVYATDLACLATLAALIYYFLLNWQLALALTPI
LIFLLWLASWFNYDGPTKFGLWVFIITFVVGWGLQFYGHFIEGKKPAFMVNFTQALIAPLYLTAELFFMAGLMSSLREQI
YGNEEVNTEETSKTKTKSKS

Sequences:

>Translated_180_residues
MKPFIEQAQFYATYHQNQATRYTHMAGVPLIMLSIMIFLGFVKIVIPGVYATDLACLATLAALIYYFLLNWQLALALTPI
LIFLLWLASWFNYDGPTKFGLWVFIITFVVGWGLQFYGHFIEGKKPAFMVNFTQALIAPLYLTAELFFMAGLMSSLREQI
YGNEEVNTEETSKTKTKSKS
>Mature_180_residues
MKPFIEQAQFYATYHQNQATRYTHMAGVPLIMLSIMIFLGFVKIVIPGVYATDLACLATLAALIYYFLLNWQLALALTPI
LIFLLWLASWFNYDGPTKFGLWVFIITFVVGWGLQFYGHFIEGKKPAFMVNFTQALIAPLYLTAELFFMAGLMSSLREQI
YGNEEVNTEETSKTKTKSKS

Specific function: Unknown

COG id: COG4539

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20541; Mature: 20541

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPFIEQAQFYATYHQNQATRYTHMAGVPLIMLSIMIFLGFVKIVIPGVYATDLACLATL
CCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AALIYYFLLNWQLALALTPILIFLLWLASWFNYDGPTKFGLWVFIITFVVGWGLQFYGHF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IEGKKPAFMVNFTQALIAPLYLTAELFFMAGLMSSLREQIYGNEEVNTEETSKTKTKSKS
HCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MKPFIEQAQFYATYHQNQATRYTHMAGVPLIMLSIMIFLGFVKIVIPGVYATDLACLATL
CCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AALIYYFLLNWQLALALTPILIFLLWLASWFNYDGPTKFGLWVFIITFVVGWGLQFYGHF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IEGKKPAFMVNFTQALIAPLYLTAELFFMAGLMSSLREQIYGNEEVNTEETSKTKTKSKS
HCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA