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The map label for this gene is ybgK [H]

Identifier: 54027626

GI number: 54027626

Start: 5992190

End: 5993053

Strand: Reverse

Name: ybgK [H]

Synonym: nfa56520

Alternate gene names: 54027626

Gene position: 5993053-5992190 (Counterclockwise)

Preceding gene: 54027627

Following gene: 54027624

Centisome position: 99.53

GC content: 75.69

Gene sequence:

>864_bases
ATGATGCGGGTGCTGGCGGTCGGTCCGGCGGCCACGGTGCAGGACCTCGGCAGACCCGGGTGGTTCCATTCCGGGGTCGG
CGTGGCGGGCGCCGCCGATCGCGGGGCGCTGCGGTTGGCGAATCGGCTGGTCGGAAATCCGGAGGACGCGGCGGGCATCG
AAGTACTGCTCGGCGGTCTGGTCGTACGCGCCGAGCAGCACCACACCGTCGCCGTCACCGGCGCGTCGGCGCCGGCGACC
GTGGACGGCGTCCCGGTCGGGCACGCGAGCGTGCTCGAACTCGCGCCGGGAGCGACCCTGCGCCTCGGTCTCGCCTCCCA
CGGACTGCGCAGCTACGTCGCGGTGCGCGGCGGCGTCGACGTCGCGCCGGTGCTCGGCTCGCGCAGCCGCGACACGCTCG
CGGGCATCGGGCCCGAACCACTGCGCGCCGGTGACCGCCTGCCGATCGGGACGCCGCCGCGCACGCTGCCGGTGGTCGAT
CTCGCACCGGTCGCGCCGCAGCCCGACCCCGTGACGGTGCGCGCCCTGCCGGGGCCGCGCGCCGACTGGTTCACCGACCC
CGACGCGCTGTTCAGCGGCCTGTGGTCGGTCACCACCGACACCGATCGGGTCGGCGCCCGGCTCGCGCGGGTGGCGGGTC
CGCCGCTGCGCCGCGCGGTCGCGGGCGAATTGCGCACGGAGGGCATGGCATCGGGCTCGGTGCAGGTGCCGCCGAGCGGC
GAGCCGGTGGTCTTCCTCGCCGACCATCCGATCACCGGCGGCTATCCGGTCGTCGCGGTGGTGCTCGACGCCGACATCGA
TCTGGTCGCCCAGATCAGGCCCGGCGGACGGTTGCGGTTCCGCCGGGCGGACCGATCAGCGTGA

Upstream 100 bases:

>100_bases
AGCTGATCGGGCACACCGACGCCGTGCTGTGGGACGTCGATCGCGATCCGCCCGCGCTGATCCGCGCGGGCTCGGCGGTC
CGGTTCGTGGCGGTCGACCG

Downstream 100 bases:

>100_bases
GCGCACCGGCGAACGCATGAGATAGACGTTGTAGCTGTCCCAGGCCGACATGGTGAAGTACAGCTCGTCGCCGGTGGACC
AGGGATGGATGAAGCCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MMRVLAVGPAATVQDLGRPGWFHSGVGVAGAADRGALRLANRLVGNPEDAAGIEVLLGGLVVRAEQHHTVAVTGASAPAT
VDGVPVGHASVLELAPGATLRLGLASHGLRSYVAVRGGVDVAPVLGSRSRDTLAGIGPEPLRAGDRLPIGTPPRTLPVVD
LAPVAPQPDPVTVRALPGPRADWFTDPDALFSGLWSVTTDTDRVGARLARVAGPPLRRAVAGELRTEGMASGSVQVPPSG
EPVVFLADHPITGGYPVVAVVLDADIDLVAQIRPGGRLRFRRADRSA

Sequences:

>Translated_287_residues
MMRVLAVGPAATVQDLGRPGWFHSGVGVAGAADRGALRLANRLVGNPEDAAGIEVLLGGLVVRAEQHHTVAVTGASAPAT
VDGVPVGHASVLELAPGATLRLGLASHGLRSYVAVRGGVDVAPVLGSRSRDTLAGIGPEPLRAGDRLPIGTPPRTLPVVD
LAPVAPQPDPVTVRALPGPRADWFTDPDALFSGLWSVTTDTDRVGARLARVAGPPLRRAVAGELRTEGMASGSVQVPPSG
EPVVFLADHPITGGYPVVAVVLDADIDLVAQIRPGGRLRFRRADRSA
>Mature_287_residues
MMRVLAVGPAATVQDLGRPGWFHSGVGVAGAADRGALRLANRLVGNPEDAAGIEVLLGGLVVRAEQHHTVAVTGASAPAT
VDGVPVGHASVLELAPGATLRLGLASHGLRSYVAVRGGVDVAPVLGSRSRDTLAGIGPEPLRAGDRLPIGTPPRTLPVVD
LAPVAPQPDPVTVRALPGPRADWFTDPDALFSGLWSVTTDTDRVGARLARVAGPPLRRAVAGELRTEGMASGSVQVPPSG
EPVVFLADHPITGGYPVVAVVLDADIDLVAQIRPGGRLRFRRADRSA

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=285, Percent_Identity=39.6491228070175, Blast_Score=175, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6319685, Length=301, Percent_Identity=31.2292358803987, Blast_Score=111, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 29423; Mature: 29423

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRVLAVGPAATVQDLGRPGWFHSGVGVAGAADRGALRLANRLVGNPEDAAGIEVLLGGL
CEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCE
VVRAEQHHTVAVTGASAPATVDGVPVGHASVLELAPGATLRLGLASHGLRSYVAVRGGVD
EEEECCCCEEEEECCCCCCEECCCCCCCHHHEEECCCCEEEEEHHHCCHHHEEEECCCCE
VAPVLGSRSRDTLAGIGPEPLRAGDRLPIGTPPRTLPVVDLAPVAPQPDPVTVRALPGPR
EEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCC
ADWFTDPDALFSGLWSVTTDTDRVGARLARVAGPPLRRAVAGELRTEGMASGSVQVPPSG
CCCCCCHHHHHHHHHEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCC
EPVVFLADHPITGGYPVVAVVLDADIDLVAQIRPGGRLRFRRADRSA
CCEEEEECCCCCCCCEEEEEEEECCCEEEEEECCCCCEEEECCCCCC
>Mature Secondary Structure
MMRVLAVGPAATVQDLGRPGWFHSGVGVAGAADRGALRLANRLVGNPEDAAGIEVLLGGL
CEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCE
VVRAEQHHTVAVTGASAPATVDGVPVGHASVLELAPGATLRLGLASHGLRSYVAVRGGVD
EEEECCCCEEEEECCCCCCEECCCCCCCHHHEEECCCCEEEEEHHHCCHHHEEEECCCCE
VAPVLGSRSRDTLAGIGPEPLRAGDRLPIGTPPRTLPVVDLAPVAPQPDPVTVRALPGPR
EEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCC
ADWFTDPDALFSGLWSVTTDTDRVGARLARVAGPPLRRAVAGELRTEGMASGSVQVPPSG
CCCCCCHHHHHHHHHEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCC
EPVVFLADHPITGGYPVVAVVLDADIDLVAQIRPGGRLRFRRADRSA
CCEEEEECCCCCCCCEEEEEEEECCCEEEEEECCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]