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The map label for this gene is 54027519

Identifier: 54027519

GI number: 54027519

Start: 5874346

End: 5875191

Strand: Reverse

Name: 54027519

Synonym: nfa55450

Alternate gene names: NA

Gene position: 5875191-5874346 (Counterclockwise)

Preceding gene: 54027526

Following gene: 54027518

Centisome position: 97.57

GC content: 74.11

Gene sequence:

>846_bases
ATGTCTTCGCCGAACCCGGTTCCCGATCGGATGCTCACCCGCATCGGCGGGCTGCTGCGCAAGGCCGAGGCCACCGACAA
CGAGCACGAGGCCGAGGCGTTCCTGGCCGCCGCCCAGCGCCTGGCCACCCGCTCCTCCATCGACCTGGCGGTGGCTCGCG
CGCACGTCGCCGGGCGCGAGCGGCGACCGACGCCGGTCCAGCGGGTGATCCCGATCGGCGAGCCGGGCCGCAAGGGGCTG
CGCACCTACGTGCAGCTGTTCGTCGCGATCGCGCACGCCAACGACGTGCGCTGCGATGTCGCCCGCACCTCCACCCAGGT
CTATGCCTACGGCTTCGACACCGACATCGACACCTGTGAGGCGCTCTACACCAGCCTGCTGGTGCAGATGGTGCGGGCCA
GCGACCACTACATCAAATCCGGTGCCTACCGCGAGGCGACGGTGGAGAAGGTGGTCACCGAGCAGCGCTGGGGCCGTACC
GTGCGCCGTCGGGTGCAGGCGCCCGCCGCGCCGGTGACGGCGCGGCTGAACTTCCAGATGGCCTTCGCCGAGCGGATCGG
GCGGCGGCTGGCCGAGGTGAAGTCGGAGGTGGAGGCCGAGGCGGTGGCCGAGCCGGCGGCGGCCACCGGGACCGCGCTGG
CGTTGCGGAACAAGGAGGTGGAGCTGGTCGACTTCTACACCCGCACCTCCGAGGCCCGCGGCACGTGGCGGGGGCCGCAG
GCCTCGGCGGGTCGTTCGGCGGCCGCGCGGCGCGCCGGGGACCGGGCGGGCCGGGCGGCGCGGCTGGGTCCGGCGCCGGA
ACTGGGCGGTGTCCGCGGACAGTTGGGCCCCGGCGAGGGGGCATGA

Upstream 100 bases:

>100_bases
GTGCATCACGCAAGATACATGGTGTCCACGGTCGGCGTCCGATCATGTCGCCTTATTCCCGGGCCGGGCACCGCGGCCGG
CCCGGTTAGGCTGGCGGGTG

Downstream 100 bases:

>100_bases
CCGCCAGGGACACCCAACGCGCCCGGGTCTACGACGCCGAGCAGCTGGTGCGCGGAATGTTCGACCGGGCCGACGAATTC
GGCCATCGCACCGTCGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSSPNPVPDRMLTRIGGLLRKAEATDNEHEAEAFLAAAQRLATRSSIDLAVARAHVAGRERRPTPVQRVIPIGEPGRKGL
RTYVQLFVAIAHANDVRCDVARTSTQVYAYGFDTDIDTCEALYTSLLVQMVRASDHYIKSGAYREATVEKVVTEQRWGRT
VRRRVQAPAAPVTARLNFQMAFAERIGRRLAEVKSEVEAEAVAEPAAATGTALALRNKEVELVDFYTRTSEARGTWRGPQ
ASAGRSAAARRAGDRAGRAARLGPAPELGGVRGQLGPGEGA

Sequences:

>Translated_281_residues
MSSPNPVPDRMLTRIGGLLRKAEATDNEHEAEAFLAAAQRLATRSSIDLAVARAHVAGRERRPTPVQRVIPIGEPGRKGL
RTYVQLFVAIAHANDVRCDVARTSTQVYAYGFDTDIDTCEALYTSLLVQMVRASDHYIKSGAYREATVEKVVTEQRWGRT
VRRRVQAPAAPVTARLNFQMAFAERIGRRLAEVKSEVEAEAVAEPAAATGTALALRNKEVELVDFYTRTSEARGTWRGPQ
ASAGRSAAARRAGDRAGRAARLGPAPELGGVRGQLGPGEGA
>Mature_280_residues
SSPNPVPDRMLTRIGGLLRKAEATDNEHEAEAFLAAAQRLATRSSIDLAVARAHVAGRERRPTPVQRVIPIGEPGRKGLR
TYVQLFVAIAHANDVRCDVARTSTQVYAYGFDTDIDTCEALYTSLLVQMVRASDHYIKSGAYREATVEKVVTEQRWGRTV
RRRVQAPAAPVTARLNFQMAFAERIGRRLAEVKSEVEAEAVAEPAAATGTALALRNKEVELVDFYTRTSEARGTWRGPQA
SAGRSAAARRAGDRAGRAARLGPAPELGGVRGQLGPGEGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30401; Mature: 30270

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPNPVPDRMLTRIGGLLRKAEATDNEHEAEAFLAAAQRLATRSSIDLAVARAHVAGRE
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RRPTPVQRVIPIGEPGRKGLRTYVQLFVAIAHANDVRCDVARTSTQVYAYGFDTDIDTCE
CCCCCHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHCCCEEEEEECCCCHHHHH
ALYTSLLVQMVRASDHYIKSGAYREATVEKVVTEQRWGRTVRRRVQAPAAPVTARLNFQM
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHH
AFAERIGRRLAEVKSEVEAEAVAEPAAATGTALALRNKEVELVDFYTRTSEARGTWRGPQ
HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEEECCCCEEEEEHHHHCCCCCCCCCCCC
ASAGRSAAARRAGDRAGRAARLGPAPELGGVRGQLGPGEGA
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSPNPVPDRMLTRIGGLLRKAEATDNEHEAEAFLAAAQRLATRSSIDLAVARAHVAGRE
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RRPTPVQRVIPIGEPGRKGLRTYVQLFVAIAHANDVRCDVARTSTQVYAYGFDTDIDTCE
CCCCCHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHCCCEEEEEECCCCHHHHH
ALYTSLLVQMVRASDHYIKSGAYREATVEKVVTEQRWGRTVRRRVQAPAAPVTARLNFQM
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHH
AFAERIGRRLAEVKSEVEAEAVAEPAAATGTALALRNKEVELVDFYTRTSEARGTWRGPQ
HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEEECCCCEEEEEHHHHCCCCCCCCCCCC
ASAGRSAAARRAGDRAGRAARLGPAPELGGVRGQLGPGEGA
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA