Click here to switch to the map view.

The map label for this gene is 54027512

Identifier: 54027512

GI number: 54027512

Start: 5867215

End: 5868009

Strand: Reverse

Name: 54027512

Synonym: nfa55380

Alternate gene names: NA

Gene position: 5868009-5867215 (Counterclockwise)

Preceding gene: 54027513

Following gene: 54027506

Centisome position: 97.46

GC content: 69.81

Gene sequence:

>795_bases
ATGAGCCGACCGGTTCGGATCGGAGTTCAGCTCCAGCCCCAGCACGCCCCCGACTACGGCCGCATCCGCGACGCGGTGCT
GCGCGCCGAGGACGCCGGCGTGGACATCGTCTTCAACTGGGACCACTTCTACCCGCTCACCGGCGACCCCGACGGCGCGC
ACTTCGAATGCTGGACCATGCTCGGTGCGTTCGCCGAGCAGACCGAACGGGTCGAGATCGGCGCGCTCGTCACCGGCGGC
GGCTACCGCAACCCCGACCTGCTGGCCGACATGGCCCGCACCGTCGACCACATCAGCGGCGGCAGGCTGATCCTCGGCAT
CGGCGGCGGCTGGTTCCAGAAGGACTACACCGAGTACGGCTACGAATTCGGCACCCCGGGGACCCGGCTGAACCTGCTGA
AACAGAACATGGAGCGGATCACCGCCCGCCTGCGGGCACTGAACCCCGCTCCCCTGCGCGACATCCCGATCCTCATCGGC
GGCGGCGGCGAACGCAAAACCCTGCGCCTGGTCGCCGAATACGCCGACATCTGGCACAGCTTCTCCGATCTGGACACCCT
CGCCCGCAAGAACAAGATCCTCGCCGACCACGCCGCGGCAGCAGGCACCGACGCCGCCCGCATCGAACGCTCGGTCCAGT
GGCCCGGCCTCGACCAGGCCCCCGCCTACCTCGCCGCGGGCGTCAGCCTGTTCACCATCGGCACCAGCGGACCGGACTAC
GACCTGTCCGAGGTCGACACCGCCCTGCGCTGGCGCGACGAGGTGAATCCCCCGGACGTCAGCGGCGCGGCCTGA

Upstream 100 bases:

>100_bases
CGCGAAGTGCACGCCGCCGCGTGATGGTGTGATCTCCGGTGGGGCGGGCGCGGGCCCGCCCCACCGTCGTCTGCCGGTAC
CCCGCCACGAGAGGACAGCC

Downstream 100 bases:

>100_bases
ATCGCAATCGAGGCGGAGGCTCCGCCGAGCCGGCTGACCGTGGACCGACCCCGCCCGCGGGCTCGACCGCCGACTCAGGT
GAGGAAGGTGGCGAAGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSRPVRIGVQLQPQHAPDYGRIRDAVLRAEDAGVDIVFNWDHFYPLTGDPDGAHFECWTMLGAFAEQTERVEIGALVTGG
GYRNPDLLADMARTVDHISGGRLILGIGGGWFQKDYTEYGYEFGTPGTRLNLLKQNMERITARLRALNPAPLRDIPILIG
GGGERKTLRLVAEYADIWHSFSDLDTLARKNKILADHAAAAGTDAARIERSVQWPGLDQAPAYLAAGVSLFTIGTSGPDY
DLSEVDTALRWRDEVNPPDVSGAA

Sequences:

>Translated_264_residues
MSRPVRIGVQLQPQHAPDYGRIRDAVLRAEDAGVDIVFNWDHFYPLTGDPDGAHFECWTMLGAFAEQTERVEIGALVTGG
GYRNPDLLADMARTVDHISGGRLILGIGGGWFQKDYTEYGYEFGTPGTRLNLLKQNMERITARLRALNPAPLRDIPILIG
GGGERKTLRLVAEYADIWHSFSDLDTLARKNKILADHAAAAGTDAARIERSVQWPGLDQAPAYLAAGVSLFTIGTSGPDY
DLSEVDTALRWRDEVNPPDVSGAA
>Mature_263_residues
SRPVRIGVQLQPQHAPDYGRIRDAVLRAEDAGVDIVFNWDHFYPLTGDPDGAHFECWTMLGAFAEQTERVEIGALVTGGG
YRNPDLLADMARTVDHISGGRLILGIGGGWFQKDYTEYGYEFGTPGTRLNLLKQNMERITARLRALNPAPLRDIPILIGG
GGERKTLRLVAEYADIWHSFSDLDTLARKNKILADHAAAAGTDAARIERSVQWPGLDQAPAYLAAGVSLFTIGTSGPDYD
LSEVDTALRWRDEVNPPDVSGAA

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2161c and Rv3079c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019921
- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 28874; Mature: 28743

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPVRIGVQLQPQHAPDYGRIRDAVLRAEDAGVDIVFNWDHFYPLTGDPDGAHFECWTM
CCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCCCCCCHHHHH
LGAFAEQTERVEIGALVTGGGYRNPDLLADMARTVDHISGGRLILGIGGGWFQKDYTEYG
HHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCC
YEFGTPGTRLNLLKQNMERITARLRALNPAPLRDIPILIGGGGERKTLRLVAEYADIWHS
EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
FSDLDTLARKNKILADHAAAAGTDAARIERSVQWPGLDQAPAYLAAGVSLFTIGTSGPDY
HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHCCEEEEEEECCCCCC
DLSEVDTALRWRDEVNPPDVSGAA
CHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SRPVRIGVQLQPQHAPDYGRIRDAVLRAEDAGVDIVFNWDHFYPLTGDPDGAHFECWTM
CCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCCCCCCHHHHH
LGAFAEQTERVEIGALVTGGGYRNPDLLADMARTVDHISGGRLILGIGGGWFQKDYTEYG
HHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCC
YEFGTPGTRLNLLKQNMERITARLRALNPAPLRDIPILIGGGGERKTLRLVAEYADIWHS
EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
FSDLDTLARKNKILADHAAAAGTDAARIERSVQWPGLDQAPAYLAAGVSLFTIGTSGPDY
HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHCCEEEEEEECCCCCC
DLSEVDTALRWRDEVNPPDVSGAA
CHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]