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The map label for this gene is pimB [H]

Identifier: 54027449

GI number: 54027449

Start: 5798640

End: 5799815

Strand: Reverse

Name: pimB [H]

Synonym: nfa54750

Alternate gene names: 54027449

Gene position: 5799815-5798640 (Counterclockwise)

Preceding gene: 54027452

Following gene: 54027447

Centisome position: 96.32

GC content: 74.23

Gene sequence:

>1176_bases
GTGCGCGAAGTCCTCCTGCTCTGCTGGCGCGACTCCGGGCATCCGCAGGGCGGCGGCAGCGAGCGCTACCTCGAGCAGGT
CGGCGCGCAACTGGCCGCGCGCGGGGTCAAGGTCACGCTGCGCACCGCCCGCTATCGCGGCGCGGCCCGGCGCGAGCGGA
TCGACGGCATCGACATCAGCCGCGGCGGCGGCCGCTACACCGTCTATCCGCGCGCGCTGGCCGCCATCGCGCTCGGCAGG
CTCGGTCTCGGCCCACTGCGCGGGGTACGCCCCGACGCGGTGATCGACACCCAGAACGGCATCCCGTTCTTCGCCACCGC
CGCCACCGCGGCGCCCTCGGTGGTGCTGGTGCACCACGGGCACCGCGAGCAGTGGCCGGTCGCGGGCAGGCTGGTGGGGC
GGATCGGCTGGTGGATCGAATCCCGGCTCTCGCCGCGCGTGCACCGCGGCAACCAGTACCTGACCGTCTCGCTGCCCTCG
GCCGAGGAGCTGGCCGCGCTCGGCGTCGAGCGCGAGCGCATCGCGGTGGTGCGCAACGGCGCCGAACCGGTGCCCGCCGA
CGTGCCCACCGGTGCGGCGGTCACCCGCGCGCCCGAGCCGCGCGTCCTGGTGCTCTCACGGCTGGTTCCGCACAAGCAGA
TCGAGGACGCCCTGGCCGTCGCCGCCCGCCTGCGAAGCCGCTTCCCCGGTCTGCGGCTGGACGTGGTCGGCGGCGGCTGG
TGGGCCGACAACCTGCGCGCGACCGCCCGTGAGCTGGACATCGACGACATCGTCACCTTCCACGGCCACGTCGACGAGCG
CCGCAAACACGAGCTGCTGGCCCAGGCCTGGGTGCACGTGCTGCCCTCCCGCAAAGAGGGGTGGGGTCTGGCGGTCATCG
AGGCCGCCCAGCACGGGGTGCCGACCGTCGGCTACCGCAGCTCGCGCGGACTCACCGACTCCATCGTCGACGGGGTCACC
GGCACCCTGGTCGACGATGTCGCCCAGCTGACCGACGCGGTGGGTGAACTGCTCGCCGATGCGTCGACCCGGACGGTGAT
GGGGGAGAAGGCGCGGGCGCGAGCGCGCGAGTTCTCCTGGGAGCAGACCGGCAACGGCGTGTACGAGGTGCTGTCGGCCG
TCGCGCGCGGCGAGCGCGTGTCCGGCCTCGTCGGCGGACCTGCTCAGGGGGAGTGA

Upstream 100 bases:

>100_bases
GAACCGAACTCGCGCGGGTGCGCCCCGGGCGTGCCGGTGATCGGGTTAGGGTGTAGCCCGATATCCGTTCCGGCACCCGA
CCGACGAGAGAAGCTCCACC

Downstream 100 bases:

>100_bases
CGGAGCGTCACCGGACGGCGACACCGGGCGGCGACGAGTAGCCCGCCGAGCAAGGCGCCCGCCCACGCCAGGTGCGCGAG
ACCGGCCCAGCGGCGTCGTC

Product: putative glycosyltransferase

Products: NA

Alternate protein names: Alpha-D-mannose-alpha-(1-6)-phosphatidylmyo-inositol-mannosyltransferase; Alpha-mannosyltransferase; Alpha-manT; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MREVLLLCWRDSGHPQGGGSERYLEQVGAQLAARGVKVTLRTARYRGAARRERIDGIDISRGGGRYTVYPRALAAIALGR
LGLGPLRGVRPDAVIDTQNGIPFFATAATAAPSVVLVHHGHREQWPVAGRLVGRIGWWIESRLSPRVHRGNQYLTVSLPS
AEELAALGVERERIAVVRNGAEPVPADVPTGAAVTRAPEPRVLVLSRLVPHKQIEDALAVAARLRSRFPGLRLDVVGGGW
WADNLRATARELDIDDIVTFHGHVDERRKHELLAQAWVHVLPSRKEGWGLAVIEAAQHGVPTVGYRSSRGLTDSIVDGVT
GTLVDDVAQLTDAVGELLADASTRTVMGEKARARAREFSWEQTGNGVYEVLSAVARGERVSGLVGGPAQGE

Sequences:

>Translated_391_residues
MREVLLLCWRDSGHPQGGGSERYLEQVGAQLAARGVKVTLRTARYRGAARRERIDGIDISRGGGRYTVYPRALAAIALGR
LGLGPLRGVRPDAVIDTQNGIPFFATAATAAPSVVLVHHGHREQWPVAGRLVGRIGWWIESRLSPRVHRGNQYLTVSLPS
AEELAALGVERERIAVVRNGAEPVPADVPTGAAVTRAPEPRVLVLSRLVPHKQIEDALAVAARLRSRFPGLRLDVVGGGW
WADNLRATARELDIDDIVTFHGHVDERRKHELLAQAWVHVLPSRKEGWGLAVIEAAQHGVPTVGYRSSRGLTDSIVDGVT
GTLVDDVAQLTDAVGELLADASTRTVMGEKARARAREFSWEQTGNGVYEVLSAVARGERVSGLVGGPAQGE
>Mature_391_residues
MREVLLLCWRDSGHPQGGGSERYLEQVGAQLAARGVKVTLRTARYRGAARRERIDGIDISRGGGRYTVYPRALAAIALGR
LGLGPLRGVRPDAVIDTQNGIPFFATAATAAPSVVLVHHGHREQWPVAGRLVGRIGWWIESRLSPRVHRGNQYLTVSLPS
AEELAALGVERERIAVVRNGAEPVPADVPTGAAVTRAPEPRVLVLSRLVPHKQIEDALAVAARLRSRFPGLRLDVVGGGW
WADNLRATARELDIDDIVTFHGHVDERRKHELLAQAWVHVLPSRKEGWGLAVIEAAQHGVPTVGYRSSRGLTDSIVDGVT
GTLVDDVAQLTDAVGELLADASTRTVMGEKARARAREFSWEQTGNGVYEVLSAVARGERVSGLVGGPAQGE

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose resid

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.57 [H]

Molecular weight: Translated: 42198; Mature: 42198

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREVLLLCWRDSGHPQGGGSERYLEQVGAQLAARGVKVTLRTARYRGAARRERIDGIDIS
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEHHHHCCHHHHHHCCCCEEE
RGGGRYTVYPRALAAIALGRLGLGPLRGVRPDAVIDTQNGIPFFATAATAAPSVVLVHHG
CCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEHHCCCCCEEEEECC
HREQWPVAGRLVGRIGWWIESRLSPRVHRGNQYLTVSLPSAEELAALGVERERIAVVRNG
CCCCCCHHHHHHHHHHHHHHHHCCCCEECCCEEEEEECCCHHHHHHHCCCHHHEEEEECC
AEPVPADVPTGAAVTRAPEPRVLVLSRLVPHKQIEDALAVAARLRSRFPGLRLDVVGGGW
CCCCCCCCCCCCEEECCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCE
WADNLRATARELDIDDIVTFHGHVDERRKHELLAQAWVHVLPSRKEGWGLAVIEAAQHGV
ECCCHHHHHHHCCHHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHCCC
PTVGYRSSRGLTDSIVDGVTGTLVDDVAQLTDAVGELLADASTRTVMGEKARARAREFSW
CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCH
EQTGNGVYEVLSAVARGERVSGLVGGPAQGE
HHCCCHHHHHHHHHHCCCHHCCEECCCCCCC
>Mature Secondary Structure
MREVLLLCWRDSGHPQGGGSERYLEQVGAQLAARGVKVTLRTARYRGAARRERIDGIDIS
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEHHHHCCHHHHHHCCCCEEE
RGGGRYTVYPRALAAIALGRLGLGPLRGVRPDAVIDTQNGIPFFATAATAAPSVVLVHHG
CCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEHHCCCCCEEEEECC
HREQWPVAGRLVGRIGWWIESRLSPRVHRGNQYLTVSLPSAEELAALGVERERIAVVRNG
CCCCCCHHHHHHHHHHHHHHHHCCCCEECCCEEEEEECCCHHHHHHHCCCHHHEEEEECC
AEPVPADVPTGAAVTRAPEPRVLVLSRLVPHKQIEDALAVAARLRSRFPGLRLDVVGGGW
CCCCCCCCCCCCEEECCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCE
WADNLRATARELDIDDIVTFHGHVDERRKHELLAQAWVHVLPSRKEGWGLAVIEAAQHGV
ECCCHHHHHHHCCHHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHCCC
PTVGYRSSRGLTDSIVDGVTGTLVDDVAQLTDAVGELLADASTRTVMGEKARARAREFSW
CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCH
EQTGNGVYEVLSAVARGERVSGLVGGPAQGE
HHCCCHHHHHHHHHHCCCHHCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA