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The map label for this gene is iniC [H]

Identifier: 54027384

GI number: 54027384

Start: 5715611

End: 5717149

Strand: Reverse

Name: iniC [H]

Synonym: nfa54100

Alternate gene names: 54027384

Gene position: 5717149-5715611 (Counterclockwise)

Preceding gene: 54027385

Following gene: 54027383

Centisome position: 94.95

GC content: 75.05

Gene sequence:

>1539_bases
GTGAGAACCGACACACCGATGGCGCCGGGAATCGTCGGCGAGGCACATCGCCTGATCGGCGCCGCCCGGCAGTCCTTCGC
CGATCAGCCGCGCCCGCGCGCCCTGCTGGCCGACTGCGCCCGCCGGCTGGATCAGCCGTTGCGGGTGGCGCTGGCGGGTT
CGCTGAAGGCGGGCAAGTCGACACTGTTGAACTCACTGGTCGGCCAGGACATCGCCCCGACCGACGCGACCGAGTGCACC
CGCGTGGTCACCTGGTACCGCAACGGCACCACCCCCAGTGTCACCGCCTACGCCGCCGACGGCGCCACCGCGAACGTGGT
GGTCCGCCGCGGCGGTGGCGCGCACGGCCTCACCTTCGACCTGTCGGGGCTGGCCTGGAACGCGCCCGGCCCCCGCGAGG
TCGATCATCTCGAGGTGGAGTGGCCGGCCGCCGCGCTGGCGAGCACCACCATCATCGACACCCCCGGCACCTCCTCGCTC
TCCCGTGAGGTGTCCCGCCGCACCGCCCGGCTGCTGACGCCGGGCGCCGACGAGGGGCGCGCCGACGATCTGTCCGTCCC
CGGCGCCGACGCCGTCGTCTACCTGTTGCGCCGCCTCGACGCCACCGACATCGATTTCCTGGAACGGGTGGGCGCGGGCG
ACCGCGGCGCGGCCGGGCCGCTGGGCGTGGTGGGCGTGGTCTCGCGCGCGGACGAGATCGGCGCGGGCCGCATCGACGCA
CTGCACTCGGCCCGCGACGTGGCCGCCCGCTTCGCCACCGAACTGGAGCGCACCGGACTGTGCCAGGCGGTGATCCCGGT
CGCGGGGTTGCTGGCCTTCGCGGCGGCCACGCTGCGGCAGCAGGAGTTCGCCGCCTTCCAGGCGCTGGCCGGAATCCCGG
TGGAGGAATTGAGCGCGGCGATGTTGTCGGCCGACCGGTTCGCCCGCCCCGACATCGCGTTGCCGGTGCCGCCGGAACTG
CGTGCCCAGCTGGCCGAGCGGTTCGGCATGTTCGGCATCAGGATGGCGGTCACGCTGATCCGCCTCGGCGTGCGCGATTC
GGCGTCGCTGGCGGCCGAGCTGGCCGCGCGCAGCGGTGTCGACGAACTGCGCGCGGTGCTGGACGTGCAGTTCGCCCAGC
GCGCCGACCAGCTGAAGGCGCATTCCGCGCTGACCGCGCTCGCGCGGGTGCTCGCCACCTACCCCGGCACCCGCGCCGAC
GCGCTGCTGCCACGGGTGCGCACCCTGCTCGCCGACGTGCACGGTTTCGCCGAACTGCGCCTGCTCGGCCGCCTGCGCAC
CGACGAGCTGCCGCTACCGCCCGACGACCTCGCCGAACTGCACCGCCTCATCGGCGGCGCCGGGGTCGCTCCGCACCTGC
GCCTCGGCCTGCCTGCGGACGCGCCTGCCCCGGTGGCGCGCGCTCGCGCCGCGGAACTCGTGCGCAAGTGGCGCGAGCGG
GCCAGGCATCCGCTGGCGGACCAGCTCACCCGGTCGGCCTGCCAGATCGCCGCCCGCAGCGCCGAGGGCGTCCTGCCGCT
GCTCCCGCCGGGCCGCTGA

Upstream 100 bases:

>100_bases
CCGAGCAGAAGACCACCGAGCAGAAGACCACCGAGCAGAAGAACACGAGCACCGCCGGGACAGCGCCCGCCGCCGTGGAG
GGCGCCGGTACGGTTGCCGG

Downstream 100 bases:

>100_bases
GCCGGGGTCGGCGAACCCCGGAGAGAATTTTCCGCATCCCGGAATAGAACCCCCAGGCCAGTGGTTGAGACGATCGACAA
CATTGAGTGTGTCGGGCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MRTDTPMAPGIVGEAHRLIGAARQSFADQPRPRALLADCARRLDQPLRVALAGSLKAGKSTLLNSLVGQDIAPTDATECT
RVVTWYRNGTTPSVTAYAADGATANVVVRRGGGAHGLTFDLSGLAWNAPGPREVDHLEVEWPAAALASTTIIDTPGTSSL
SREVSRRTARLLTPGADEGRADDLSVPGADAVVYLLRRLDATDIDFLERVGAGDRGAAGPLGVVGVVSRADEIGAGRIDA
LHSARDVAARFATELERTGLCQAVIPVAGLLAFAAATLRQQEFAAFQALAGIPVEELSAAMLSADRFARPDIALPVPPEL
RAQLAERFGMFGIRMAVTLIRLGVRDSASLAAELAARSGVDELRAVLDVQFAQRADQLKAHSALTALARVLATYPGTRAD
ALLPRVRTLLADVHGFAELRLLGRLRTDELPLPPDDLAELHRLIGGAGVAPHLRLGLPADAPAPVARARAAELVRKWRER
ARHPLADQLTRSACQIAARSAEGVLPLLPPGR

Sequences:

>Translated_512_residues
MRTDTPMAPGIVGEAHRLIGAARQSFADQPRPRALLADCARRLDQPLRVALAGSLKAGKSTLLNSLVGQDIAPTDATECT
RVVTWYRNGTTPSVTAYAADGATANVVVRRGGGAHGLTFDLSGLAWNAPGPREVDHLEVEWPAAALASTTIIDTPGTSSL
SREVSRRTARLLTPGADEGRADDLSVPGADAVVYLLRRLDATDIDFLERVGAGDRGAAGPLGVVGVVSRADEIGAGRIDA
LHSARDVAARFATELERTGLCQAVIPVAGLLAFAAATLRQQEFAAFQALAGIPVEELSAAMLSADRFARPDIALPVPPEL
RAQLAERFGMFGIRMAVTLIRLGVRDSASLAAELAARSGVDELRAVLDVQFAQRADQLKAHSALTALARVLATYPGTRAD
ALLPRVRTLLADVHGFAELRLLGRLRTDELPLPPDDLAELHRLIGGAGVAPHLRLGLPADAPAPVARARAAELVRKWRER
ARHPLADQLTRSACQIAARSAEGVLPLLPPGR
>Mature_512_residues
MRTDTPMAPGIVGEAHRLIGAARQSFADQPRPRALLADCARRLDQPLRVALAGSLKAGKSTLLNSLVGQDIAPTDATECT
RVVTWYRNGTTPSVTAYAADGATANVVVRRGGGAHGLTFDLSGLAWNAPGPREVDHLEVEWPAAALASTTIIDTPGTSSL
SREVSRRTARLLTPGADEGRADDLSVPGADAVVYLLRRLDATDIDFLERVGAGDRGAAGPLGVVGVVSRADEIGAGRIDA
LHSARDVAARFATELERTGLCQAVIPVAGLLAFAAATLRQQEFAAFQALAGIPVEELSAAMLSADRFARPDIALPVPPEL
RAQLAERFGMFGIRMAVTLIRLGVRDSASLAAELAARSGVDELRAVLDVQFAQRADQLKAHSALTALARVLATYPGTRAD
ALLPRVRTLLADVHGFAELRLLGRLRTDELPLPPDDLAELHRLIGGAGVAPHLRLGLPADAPAPVARARAAELVRKWRER
ARHPLADQLTRSACQIAARSAEGVLPLLPPGR

Specific function: Unknown

COG id: COG0699

COG function: function code R; Predicted GTPases (dynamin-related)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001401 [H]

Pfam domain/function: PF00350 Dynamin_N [H]

EC number: NA

Molecular weight: Translated: 54054; Mature: 54054

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTDTPMAPGIVGEAHRLIGAARQSFADQPRPRALLADCARRLDQPLRVALAGSLKAGKS
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHCCCHHHHH
TLLNSLVGQDIAPTDATECTRVVTWYRNGTTPSVTAYAADGATANVVVRRGGGAHGLTFD
HHHHHHHCCCCCCCCHHHHHHHHHHEECCCCCCEEEEECCCCCEEEEEECCCCCCCCEEE
LSGLAWNAPGPREVDHLEVEWPAAALASTTIIDTPGTSSLSREVSRRTARLLTPGADEGR
ECCEEECCCCCCCCCCEEEECCHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCC
ADDLSVPGADAVVYLLRRLDATDIDFLERVGAGDRGAAGPLGVVGVVSRADEIGAGRIDA
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHH
LHSARDVAARFATELERTGLCQAVIPVAGLLAFAAATLRQQEFAAFQALAGIPVEELSAA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
MLSADRFARPDIALPVPPELRAQLAERFGMFGIRMAVTLIRLGVRDSASLAAELAARSGV
HHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCH
DELRAVLDVQFAQRADQLKAHSALTALARVLATYPGTRADALLPRVRTLLADVHGFAELR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLGRLRTDELPLPPDDLAELHRLIGGAGVAPHLRLGLPADAPAPVARARAAELVRKWRER
HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH
ARHPLADQLTRSACQIAARSAEGVLPLLPPGR
HCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRTDTPMAPGIVGEAHRLIGAARQSFADQPRPRALLADCARRLDQPLRVALAGSLKAGKS
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHCCCHHHHH
TLLNSLVGQDIAPTDATECTRVVTWYRNGTTPSVTAYAADGATANVVVRRGGGAHGLTFD
HHHHHHHCCCCCCCCHHHHHHHHHHEECCCCCCEEEEECCCCCEEEEEECCCCCCCCEEE
LSGLAWNAPGPREVDHLEVEWPAAALASTTIIDTPGTSSLSREVSRRTARLLTPGADEGR
ECCEEECCCCCCCCCCEEEECCHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCC
ADDLSVPGADAVVYLLRRLDATDIDFLERVGAGDRGAAGPLGVVGVVSRADEIGAGRIDA
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHH
LHSARDVAARFATELERTGLCQAVIPVAGLLAFAAATLRQQEFAAFQALAGIPVEELSAA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
MLSADRFARPDIALPVPPELRAQLAERFGMFGIRMAVTLIRLGVRDSASLAAELAARSGV
HHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCH
DELRAVLDVQFAQRADQLKAHSALTALARVLATYPGTRADALLPRVRTLLADVHGFAELR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLGRLRTDELPLPPDDLAELHRLIGGAGVAPHLRLGLPADAPAPVARARAAELVRKWRER
HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHH
ARHPLADQLTRSACQIAARSAEGVLPLLPPGR
HCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]