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The map label for this gene is 54027366

Identifier: 54027366

GI number: 54027366

Start: 5697528

End: 5698052

Strand: Reverse

Name: 54027366

Synonym: nfa53920

Alternate gene names: NA

Gene position: 5698052-5697528 (Counterclockwise)

Preceding gene: 54027367

Following gene: 54027365

Centisome position: 94.63

GC content: 62.48

Gene sequence:

>525_bases
ATGCGGCGTGTACTGGTGATCGTTGCCGCGGCAGCGGTGGTGCCCGTTCTGGGGGCGTGTGGGGGGACGACCAGCGGGAC
GGCGACCACGTCGACCAGCAGCCCGCAAGCTGCCATCTGGAATCCCTGCACGCAGATCCCTGATGATCTGTTGCGGCAAC
TGGATGTCGATCCGGCAACCGAGGAGATCGGGGTAGCGGGCCAGCATCAGTCCGGGTGGGAAATCTGCGGATGGAAGGGT
GCAACGCACTACTTGACCGTCTTCTCCACTGGCAGAACGGTTCAGGAAATTCGCGAGAAGCCGGGCAACGTCGACTTCAC
CGAGGTATCGGTCGGTGGGCGAGCGGGAGTCCGGTATCGAGTCGAGGGGGCATCGAAGAAGCTCACCTGCGATATCGCTT
TCGCTGCCGCCCAGGGGTCCATCTCGGTGATGATCAGCAACAACCCTGTTGCCGATAGTCCTGAGGATCCCTGTCAGATC
GCGCAGCGTTCGGCAGCCCAACTGGTGCCGCTTTTTCCGCAGTAG

Upstream 100 bases:

>100_bases
GCGGGCCTGCGCACGGAGGGTGCGCCACTGTTGTGGGCTGTCGAGCGGGTTGGTTAGGCTCGAAGAGACCTGATCGGTCC
GGATCACGGAGGGGGAGCGG

Downstream 100 bases:

>100_bases
ATCATCCGAGGGGGTAGCCGATGAGTGAGCACACGATATCGCAATGGCAGCAGTTCAGAGCCCAGGCGAGGGCCGGTGAA
CTGTTTCTCGATGATGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MRRVLVIVAAAAVVPVLGACGGTTSGTATTSTSSPQAAIWNPCTQIPDDLLRQLDVDPATEEIGVAGQHQSGWEICGWKG
ATHYLTVFSTGRTVQEIREKPGNVDFTEVSVGGRAGVRYRVEGASKKLTCDIAFAAAQGSISVMISNNPVADSPEDPCQI
AQRSAAQLVPLFPQ

Sequences:

>Translated_174_residues
MRRVLVIVAAAAVVPVLGACGGTTSGTATTSTSSPQAAIWNPCTQIPDDLLRQLDVDPATEEIGVAGQHQSGWEICGWKG
ATHYLTVFSTGRTVQEIREKPGNVDFTEVSVGGRAGVRYRVEGASKKLTCDIAFAAAQGSISVMISNNPVADSPEDPCQI
AQRSAAQLVPLFPQ
>Mature_174_residues
MRRVLVIVAAAAVVPVLGACGGTTSGTATTSTSSPQAAIWNPCTQIPDDLLRQLDVDPATEEIGVAGQHQSGWEICGWKG
ATHYLTVFSTGRTVQEIREKPGNVDFTEVSVGGRAGVRYRVEGASKKLTCDIAFAAAQGSISVMISNNPVADSPEDPCQI
AQRSAAQLVPLFPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18238; Mature: 18238

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVLVIVAAAAVVPVLGACGGTTSGTATTSTSSPQAAIWNPCTQIPDDLLRQLDVDPAT
CCEEEEEHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHCCHHHHHHHCCCCCCC
EEIGVAGQHQSGWEICGWKGATHYLTVFSTGRTVQEIREKPGNVDFTEVSVGGRAGVRYR
HHHCCCCCCCCCCEEECCCCCCEEEEEEECCCHHHHHHCCCCCCCEEEEECCCCCCEEEE
VEGASKKLTCDIAFAAAQGSISVMISNNPVADSPEDPCQIAQRSAAQLVPLFPQ
ECCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHEECCCCC
>Mature Secondary Structure
MRRVLVIVAAAAVVPVLGACGGTTSGTATTSTSSPQAAIWNPCTQIPDDLLRQLDVDPAT
CCEEEEEHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHCCHHHHHHHCCCCCCC
EEIGVAGQHQSGWEICGWKGATHYLTVFSTGRTVQEIREKPGNVDFTEVSVGGRAGVRYR
HHHCCCCCCCCCCEEECCCCCCEEEEEEECCCHHHHHHCCCCCCCEEEEECCCCCCEEEE
VEGASKKLTCDIAFAAAQGSISVMISNNPVADSPEDPCQIAQRSAAQLVPLFPQ
ECCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA