Click here to switch to the map view.

The map label for this gene is 54027364

Identifier: 54027364

GI number: 54027364

Start: 5695772

End: 5697118

Strand: Reverse

Name: 54027364

Synonym: nfa53900

Alternate gene names: NA

Gene position: 5697118-5695772 (Counterclockwise)

Preceding gene: 54027365

Following gene: 54027363

Centisome position: 94.62

GC content: 70.68

Gene sequence:

>1347_bases
ATGAGCTTGCCCGGTATGAGTTTCTTCGAGAACTACACTTTCGGTGCGGCCACGCTCCGCAATCTCACGAATTGGATTGC
CGGTGAGGAACTCGAGCCGGGTACCCGGCCGGGTGATGTGCAGGGCCGCTACAACAATCAGCGGGAGGCGGTGCGGAACG
AGGCCGGGCAGATCGGTTTCGTCGGGGATTTCCGGTCCGGTATCCGCAGCCAGGAGTTCTTCGAGGAGTCGCTCGAGGTG
TTGCGCGCCAAGGTCGACAAGATCGATCTCACCGCGGTGGACGACCTGCGCGCGGCGTGGGACGAGATCGGCAAGCGGGC
CGAAACCGCGCAGGCGCAGTTCAGTACACGGATGCAGCGCGCGACCGACGAGAGTGTGTGGCGCGGCGAGTCCGCGCGTG
CCGTGGCCCAGGGGGTGGCCCAGTTCCTGGAGTCGGCGACCAAGGCGTCCCAGGCCGCCCGGTTGATGGCGAAGAAGACC
GAGGAATTGGCCACCGGGCTCGCTCCGACCAAGGAGCTGGTTCCGCAGGTGCCCGAACACAATACGAATTGGGAGAACAC
GCGTCGCTGGATCGCGGGGCGTGGCTGGCGGGACAACGAGGAGGCCTACGAGACGGCGCTGGCCGAGGCGCGCCGGGTGC
TGCGGACCGTCTACGCCCCGGTGTTGCGCGAGACCGACAACGTGCCGGTGATCCCCAAGCCCTACAACCCGACCTCCGAG
CCGGGCGGTTCCGATCCCGGCTCGGGTTCGACGGATCAGGGCACGCCGGGGTGGAACGGCACGTCGACACCGTCGGGCAG
CACCGGGCCCGCGTCGCAGCAGCCGGGTGATCCCGGGCCGGGCGAGGACCAAGCTGCCCCGGATCAGCAGGACACTGGCC
GGCCGTCGAGCCAGACGCCCGGCGACCGGACGCAGCAGTCGACCGATCCGGCGGGTGCGGGCGACTCGACGAACCCCGCG
GGCACGACACCGGCTTCGGCCACCCCGACCCTGCCGGGCAGCCCCGGCTCCCCGACGACACCCGGTTCTCCCGGCCTTGG
TTCGCCGGGTTCCGGCTCGCCCGGTTCGGGCTACCCGGGTTCGCCGGGCGCGGTGCCGGGTGCGGGTTCGAGTGTGCCGG
GCGCGCCCGCGGCCGCCCAGGCCGCGATGAGTTCGGCGGCCGGTCGTGCCGCCGCCAACGGGCGGGCGGGGATGATGGGC
ATGCCCGGTATGGCCGGTCGCGGTGCGCAGAGCGACGAGGAGCACACCAAGGGCGTCCCCGACTACCTGATCAACCAGGA
GAACGGGGAGGAACTGATCGGCACCGCGACGCGGCCGAAGGCGGTCCCGCCGGTGATCGGGGAATGA

Upstream 100 bases:

>100_bases
TGCGCGAGATCATGCAGCTCTCCATCGACCGCCTGACCGAGCAGGACACGGTGAATTCGAACCAGATCACCTCCACGGCG
GCGGATCTGGGGGCGCCGCG

Downstream 100 bases:

>100_bases
GCGCGATCGCCCGCTGGCAGTTCACCGCGCTCGAGTTCCGGGTGCTGTGGGAGTCGACCGGCCGCGACGTGCTGCCCTAT
CCGTTGCGGCACCGCTGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MSLPGMSFFENYTFGAATLRNLTNWIAGEELEPGTRPGDVQGRYNNQREAVRNEAGQIGFVGDFRSGIRSQEFFEESLEV
LRAKVDKIDLTAVDDLRAAWDEIGKRAETAQAQFSTRMQRATDESVWRGESARAVAQGVAQFLESATKASQAARLMAKKT
EELATGLAPTKELVPQVPEHNTNWENTRRWIAGRGWRDNEEAYETALAEARRVLRTVYAPVLRETDNVPVIPKPYNPTSE
PGGSDPGSGSTDQGTPGWNGTSTPSGSTGPASQQPGDPGPGEDQAAPDQQDTGRPSSQTPGDRTQQSTDPAGAGDSTNPA
GTTPASATPTLPGSPGSPTTPGSPGLGSPGSGSPGSGYPGSPGAVPGAGSSVPGAPAAAQAAMSSAAGRAAANGRAGMMG
MPGMAGRGAQSDEEHTKGVPDYLINQENGEELIGTATRPKAVPPVIGE

Sequences:

>Translated_448_residues
MSLPGMSFFENYTFGAATLRNLTNWIAGEELEPGTRPGDVQGRYNNQREAVRNEAGQIGFVGDFRSGIRSQEFFEESLEV
LRAKVDKIDLTAVDDLRAAWDEIGKRAETAQAQFSTRMQRATDESVWRGESARAVAQGVAQFLESATKASQAARLMAKKT
EELATGLAPTKELVPQVPEHNTNWENTRRWIAGRGWRDNEEAYETALAEARRVLRTVYAPVLRETDNVPVIPKPYNPTSE
PGGSDPGSGSTDQGTPGWNGTSTPSGSTGPASQQPGDPGPGEDQAAPDQQDTGRPSSQTPGDRTQQSTDPAGAGDSTNPA
GTTPASATPTLPGSPGSPTTPGSPGLGSPGSGSPGSGYPGSPGAVPGAGSSVPGAPAAAQAAMSSAAGRAAANGRAGMMG
MPGMAGRGAQSDEEHTKGVPDYLINQENGEELIGTATRPKAVPPVIGE
>Mature_447_residues
SLPGMSFFENYTFGAATLRNLTNWIAGEELEPGTRPGDVQGRYNNQREAVRNEAGQIGFVGDFRSGIRSQEFFEESLEVL
RAKVDKIDLTAVDDLRAAWDEIGKRAETAQAQFSTRMQRATDESVWRGESARAVAQGVAQFLESATKASQAARLMAKKTE
ELATGLAPTKELVPQVPEHNTNWENTRRWIAGRGWRDNEEAYETALAEARRVLRTVYAPVLRETDNVPVIPKPYNPTSEP
GGSDPGSGSTDQGTPGWNGTSTPSGSTGPASQQPGDPGPGEDQAAPDQQDTGRPSSQTPGDRTQQSTDPAGAGDSTNPAG
TTPASATPTLPGSPGSPTTPGSPGLGSPGSGSPGSGYPGSPGAVPGAGSSVPGAPAAAQAAMSSAAGRAAANGRAGMMGM
PGMAGRGAQSDEEHTKGVPDYLINQENGEELIGTATRPKAVPPVIGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46437; Mature: 46306

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPGMSFFENYTFGAATLRNLTNWIAGEELEPGTRPGDVQGRYNNQREAVRNEAGQIGF
CCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
VGDFRSGIRSQEFFEESLEVLRAKVDKIDLTAVDDLRAAWDEIGKRAETAQAQFSTRMQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATDESVWRGESARAVAQGVAQFLESATKASQAARLMAKKTEELATGLAPTKELVPQVPEH
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC
NTNWENTRRWIAGRGWRDNEEAYETALAEARRVLRTVYAPVLRETDNVPVIPKPYNPTSE
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PGGSDPGSGSTDQGTPGWNGTSTPSGSTGPASQQPGDPGPGEDQAAPDQQDTGRPSSQTP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
GDRTQQSTDPAGAGDSTNPAGTTPASATPTLPGSPGSPTTPGSPGLGSPGSGSPGSGYPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPGAVPGAGSSVPGAPAAAQAAMSSAAGRAAANGRAGMMGMPGMAGRGAQSDEEHTKGVP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
DYLINQENGEELIGTATRPKAVPPVIGE
HHHHCCCCCHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLPGMSFFENYTFGAATLRNLTNWIAGEELEPGTRPGDVQGRYNNQREAVRNEAGQIGF
CCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
VGDFRSGIRSQEFFEESLEVLRAKVDKIDLTAVDDLRAAWDEIGKRAETAQAQFSTRMQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATDESVWRGESARAVAQGVAQFLESATKASQAARLMAKKTEELATGLAPTKELVPQVPEH
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC
NTNWENTRRWIAGRGWRDNEEAYETALAEARRVLRTVYAPVLRETDNVPVIPKPYNPTSE
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PGGSDPGSGSTDQGTPGWNGTSTPSGSTGPASQQPGDPGPGEDQAAPDQQDTGRPSSQTP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
GDRTQQSTDPAGAGDSTNPAGTTPASATPTLPGSPGSPTTPGSPGLGSPGSGSPGSGYPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPGAVPGAGSSVPGAPAAAQAAMSSAAGRAAANGRAGMMGMPGMAGRGAQSDEEHTKGVP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
DYLINQENGEELIGTATRPKAVPPVIGE
HHHHCCCCCHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA