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The map label for this gene is 54027334

Identifier: 54027334

GI number: 54027334

Start: 5665097

End: 5665513

Strand: Reverse

Name: 54027334

Synonym: nfa53600

Alternate gene names: NA

Gene position: 5665513-5665097 (Counterclockwise)

Preceding gene: 54027335

Following gene: 54027333

Centisome position: 94.09

GC content: 71.7

Gene sequence:

>417_bases
ATGAGTTACGCCGGGGACATCACCCCCCGCCAGGCCTGGGAACTGCTGCGTGAGAACCCCGCGGCCGTCCTCGTCGACGT
GCGTACCGAAGCCGAGTGGCGCTTCGTCGGCGTGCCCGACACCAGCTCCATCGACCGGCCCACCCTGCTGATCGAGTGGG
TGGACGGCACCGGCTCGCCGAACCCGCGCTTCGCCGAGCAGCTCGGCAAGGCACTGGCCGACCGCGCGCCGGAGGCGCCC
GTGGTGTTCCTGTGTCGGTCGGGGCAGCGTTCGGCGCACGCCGCCGACGTCGCGACCGAGCTGGGAATCACCCCGTCCTA
CAACGTGATCGAGGGCTTCGAGGGTTCGCTGGATGCCAACGGGCACCGCGGCGGCACCGGTTGGCGGGCCGAGGGGCTGC
CCTGGAGGCAGTCGTGA

Upstream 100 bases:

>100_bases
GCTCGCTGGTCGGCAACCCTCCTCCGCGGCGGGGTGCTCCGGGTGACGACCTGGCCGTACCGAAGACGGTGCGGCAAGTG
CGGATTCACAGGAGGTTCGA

Downstream 100 bases:

>100_bases
TCACCGGCGGCGCGTTCGACAAGCCGCTGCCCGAGGGCGTCGGTCCCGCGACCCTCGGGGTGCGCGGCGGGCTGCGCCGG
TCCGGCTTCGAGGAGACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSYAGDITPRQAWELLRENPAAVLVDVRTEAEWRFVGVPDTSSIDRPTLLIEWVDGTGSPNPRFAEQLGKALADRAPEAP
VVFLCRSGQRSAHAADVATELGITPSYNVIEGFEGSLDANGHRGGTGWRAEGLPWRQS

Sequences:

>Translated_138_residues
MSYAGDITPRQAWELLRENPAAVLVDVRTEAEWRFVGVPDTSSIDRPTLLIEWVDGTGSPNPRFAEQLGKALADRAPEAP
VVFLCRSGQRSAHAADVATELGITPSYNVIEGFEGSLDANGHRGGTGWRAEGLPWRQS
>Mature_137_residues
SYAGDITPRQAWELLRENPAAVLVDVRTEAEWRFVGVPDTSSIDRPTLLIEWVDGTGSPNPRFAEQLGKALADRAPEAPV
VFLCRSGQRSAHAADVATELGITPSYNVIEGFEGSLDANGHRGGTGWRAEGLPWRQS

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 14987; Mature: 14856

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYAGDITPRQAWELLRENPAAVLVDVRTEAEWRFVGVPDTSSIDRPTLLIEWVDGTGSP
CCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCC
NPRFAEQLGKALADRAPEAPVVFLCRSGQRSAHAADVATELGITPSYNVIEGFEGSLDAN
CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GHRGGTGWRAEGLPWRQS
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SYAGDITPRQAWELLRENPAAVLVDVRTEAEWRFVGVPDTSSIDRPTLLIEWVDGTGSP
CCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCC
NPRFAEQLGKALADRAPEAPVVFLCRSGQRSAHAADVATELGITPSYNVIEGFEGSLDAN
CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GHRGGTGWRAEGLPWRQS
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11319266 [H]