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The map label for this gene is 54027208

Identifier: 54027208

GI number: 54027208

Start: 5530778

End: 5531563

Strand: Reverse

Name: 54027208

Synonym: nfa52340

Alternate gene names: NA

Gene position: 5531563-5530778 (Counterclockwise)

Preceding gene: 54027209

Following gene: 54027207

Centisome position: 91.87

GC content: 67.3

Gene sequence:

>786_bases
ATGGAATTGAACGGGTCGCCGGTCACCCAGACCGATCTCGCCGCACTGGCGTTGATCGGGTACGGGCACTTCACCTCCAT
GCGCGTCGAGCGCGGTGGCGCGGTGCGCGGGCTCAGCCAGCACCTGGAGCGGCTGGTCCGCGACTGCCGGACGGTCTTCG
ACAGTGACCTGGATCCCGACCGGGTCCGCGCGCTCGTCCGACAGGCCCTGCCCGCCGAGACCGACGGCGCGTTCGTGGTA
CGGGTGACGGTGTTCGACCCGCACCTGCCGTTGGGCAACCCCGGTGCCGACGCCGCTCCGCAGATCCTGGTGACCTGGCG
CCACGTGCCGGTCGGGCCACTGGCACCGCTGAGGCTGCGGTCGGCGGTCTACACCCGTGACCTGCCGCGGACCAAGCACG
TCGGATTGTTCGGCGCGCTCCATCAACGTCGCCTCGCTCAACGCGACGGATTCGACGACGTGCTGTTCACCGCGCCCGAC
GGCACGATCAGCGAGATCGCAACATCCAACATCGGCGTACTCGTCGATGGCCAGCTGATCTGGCCGCAGGCTGATGTCCT
GCCCGGAGTCACGATGCGACTGCTCGGCCAAACCCTCGACGCAGAAGTCATCTCCAAACCGATCACCCTGGCAGACCTTG
CACACGTCGACGGAGCGGTCGCGACCAACGCCGCAGTGGGAGTCCGTGCGATCAGCCGCATCGACGACGCCGACATTCCC
GTCGACCACGCCGCTATCGACCGGCTGCGCACAGAATACGAATCCATTCCGGCCCAGCAGATTTGA

Upstream 100 bases:

>100_bases
AGGCACTGGAACTGTCTCCTCGGCGCATTGCGCTGACGTTTCACTGACGTTCGGTGCCGGGCCGACGGTCGGGTTCGGTC
TGCGGTGCGACACTGACGGC

Downstream 100 bases:

>100_bases
GCCACACCAACGCCTACCGCTGACTAGGGTTGACGCCGACCGCTCGGAGAGAGGAGCACTGCGGCGATGGCGATTGTGGT
CCGCACGTGGACCGGAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Class IV Aminotransferase

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MELNGSPVTQTDLAALALIGYGHFTSMRVERGGAVRGLSQHLERLVRDCRTVFDSDLDPDRVRALVRQALPAETDGAFVV
RVTVFDPHLPLGNPGADAAPQILVTWRHVPVGPLAPLRLRSAVYTRDLPRTKHVGLFGALHQRRLAQRDGFDDVLFTAPD
GTISEIATSNIGVLVDGQLIWPQADVLPGVTMRLLGQTLDAEVISKPITLADLAHVDGAVATNAAVGVRAISRIDDADIP
VDHAAIDRLRTEYESIPAQQI

Sequences:

>Translated_261_residues
MELNGSPVTQTDLAALALIGYGHFTSMRVERGGAVRGLSQHLERLVRDCRTVFDSDLDPDRVRALVRQALPAETDGAFVV
RVTVFDPHLPLGNPGADAAPQILVTWRHVPVGPLAPLRLRSAVYTRDLPRTKHVGLFGALHQRRLAQRDGFDDVLFTAPD
GTISEIATSNIGVLVDGQLIWPQADVLPGVTMRLLGQTLDAEVISKPITLADLAHVDGAVATNAAVGVRAISRIDDADIP
VDHAAIDRLRTEYESIPAQQI
>Mature_261_residues
MELNGSPVTQTDLAALALIGYGHFTSMRVERGGAVRGLSQHLERLVRDCRTVFDSDLDPDRVRALVRQALPAETDGAFVV
RVTVFDPHLPLGNPGADAAPQILVTWRHVPVGPLAPLRLRSAVYTRDLPRTKHVGLFGALHQRRLAQRDGFDDVLFTAPD
GTISEIATSNIGVLVDGQLIWPQADVLPGVTMRLLGQTLDAEVISKPITLADLAHVDGAVATNAAVGVRAISRIDDADIP
VDHAAIDRLRTEYESIPAQQI

Specific function: Unknown

COG id: COG0115

COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28184; Mature: 28184

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELNGSPVTQTDLAALALIGYGHFTSMRVERGGAVRGLSQHLERLVRDCRTVFDSDLDPD
CCCCCCCCCHHHHHHHHHHHCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
RVRALVRQALPAETDGAFVVRVTVFDPHLPLGNPGADAAPQILVTWRHVPVGPLAPLRLR
HHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHH
SAVYTRDLPRTKHVGLFGALHQRRLAQRDGFDDVLFTAPDGTISEIATSNIGVLVDGQLI
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCEEECCEEE
WPQADVLPGVTMRLLGQTLDAEVISKPITLADLAHVDGAVATNAAVGVRAISRIDDADIP
CCCHHCCCCHHHHHHHHHHCHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
VDHAAIDRLRTEYESIPAQQI
CHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MELNGSPVTQTDLAALALIGYGHFTSMRVERGGAVRGLSQHLERLVRDCRTVFDSDLDPD
CCCCCCCCCHHHHHHHHHHHCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
RVRALVRQALPAETDGAFVVRVTVFDPHLPLGNPGADAAPQILVTWRHVPVGPLAPLRLR
HHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHH
SAVYTRDLPRTKHVGLFGALHQRRLAQRDGFDDVLFTAPDGTISEIATSNIGVLVDGQLI
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCEEECCEEE
WPQADVLPGVTMRLLGQTLDAEVISKPITLADLAHVDGAVATNAAVGVRAISRIDDADIP
CCCHHCCCCHHHHHHHHHHCHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
VDHAAIDRLRTEYESIPAQQI
CHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA