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The map label for this gene is rex [H]

Identifier: 54027145

GI number: 54027145

Start: 5470028

End: 5470873

Strand: Reverse

Name: rex [H]

Synonym: nfa51710

Alternate gene names: 54027145

Gene position: 5470873-5470028 (Counterclockwise)

Preceding gene: 54027146

Following gene: 54027144

Centisome position: 90.86

GC content: 71.28

Gene sequence:

>846_bases
GTGACAGAGCAGCATGAGACGCCAGGTGGCGTCTCCGGCGGGGCTCTGCGCGCTGTGCAGAAGGACATTCCGCAGGCCAC
GGTGGCGCGGCTGGCCGCCTATCTGCGGGTCCTCGCCATGCTCGCCGACGACGGTGTGCTCATCGTATCGAGTGAGGAAC
TCGCTGTCGCGGCGGGTGTCAATTCGGCCAAGCTGCGCAAGGATCTGTCGTTCCTCGGGCCCAACGGCGTCCGGGGTGTC
GGCTATGACGTGGCCAAGTTGCGGGCCAGGATCGAGGACGTGCTCGGACTGTCCGACGGACACCGCGTGATCCTCATCGG
CGCGGGAAATCTGGGCCGCGCCCTGGTCGGTTACGGCGGTTTCCGGCGGCGCGGCTTCACCGTCGTCGGCATCTACGACA
ACGATCCCGCGGTCATCGGCCGGGCGGTGGCCGGACTGGTGGTGCGCGACATCGCGCGGCTGGCCGCCGACGTCGCCGAA
CTGCACCCCACCATCGCGGTGCTCGCGGTGCCCGACGAGGCCGCCCAGGGCGTGTGCGACCAGCTGGTCGCCGCCGGGCT
GCAGTCCATCCTGAGCTTCGCCGCCCTCGGCCTGAGCGCCCCGCCCACCGTCGAGGTGCGCCGGGTGGACCTGGCCGTGG
AGATGCAGTTGCTGTCCTTCGAGCGGGCGCGCAATGCCGAGCCCGAGCCGCTGCCCGAAGCGGCCTCCTCGGGGCGCATC
GCCCGCCGGGTACCCGGCGGGCACACCCCGGCCGCGCCCGCGGCCATCCAGCGTTCCGCCGCACACGCGGCTACCTCGCA
CACGGCAATGGAGCCAACCAGCAAGGGATCGGTGGTCACACCATGA

Upstream 100 bases:

>100_bases
CAAAATCGACCAGGGTACCGGGGCGCGTGCGCCCGGGCCGGAGGTCGAGCGACGTACCGGGCCTGCCTGTGCGCAGGTTC
GGCAGCGAGGAGCCGACGAC

Downstream 100 bases:

>100_bases
GCGTTCTTCTCGTCGGGGTCTCGCATCGCAGCGCCCCCGTCTCGGTGCTCGAGAAAGTAGCGATCACCGACGCCGACCGA
CCCAAGCTGATCGACAAGAT

Product: redox-sensing transcriptional repressor Rex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTEQHETPGGVSGGALRAVQKDIPQATVARLAAYLRVLAMLADDGVLIVSSEELAVAAGVNSAKLRKDLSFLGPNGVRGV
GYDVAKLRARIEDVLGLSDGHRVILIGAGNLGRALVGYGGFRRRGFTVVGIYDNDPAVIGRAVAGLVVRDIARLAADVAE
LHPTIAVLAVPDEAAQGVCDQLVAAGLQSILSFAALGLSAPPTVEVRRVDLAVEMQLLSFERARNAEPEPLPEAASSGRI
ARRVPGGHTPAAPAAIQRSAAHAATSHTAMEPTSKGSVVTP

Sequences:

>Translated_281_residues
MTEQHETPGGVSGGALRAVQKDIPQATVARLAAYLRVLAMLADDGVLIVSSEELAVAAGVNSAKLRKDLSFLGPNGVRGV
GYDVAKLRARIEDVLGLSDGHRVILIGAGNLGRALVGYGGFRRRGFTVVGIYDNDPAVIGRAVAGLVVRDIARLAADVAE
LHPTIAVLAVPDEAAQGVCDQLVAAGLQSILSFAALGLSAPPTVEVRRVDLAVEMQLLSFERARNAEPEPLPEAASSGRI
ARRVPGGHTPAAPAAIQRSAAHAATSHTAMEPTSKGSVVTP
>Mature_280_residues
TEQHETPGGVSGGALRAVQKDIPQATVARLAAYLRVLAMLADDGVLIVSSEELAVAAGVNSAKLRKDLSFLGPNGVRGVG
YDVAKLRARIEDVLGLSDGHRVILIGAGNLGRALVGYGGFRRRGFTVVGIYDNDPAVIGRAVAGLVVRDIARLAADVAEL
HPTIAVLAVPDEAAQGVCDQLVAAGLQSILSFAALGLSAPPTVEVRRVDLAVEMQLLSFERARNAEPEPLPEAASSGRIA
RRVPGGHTPAAPAAIQRSAAHAATSHTAMEPTSKGSVVTP

Specific function: Modulates transcription in response to changes in cellular NADH/NAD(+) redox state [H]

COG id: COG2344

COG function: function code R; AT-rich DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory rex family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR009718
- InterPro:   IPR022876
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02629 CoA_binding; PF06971 Put_DNA-bind_N [H]

EC number: NA

Molecular weight: Translated: 28972; Mature: 28840

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQHETPGGVSGGALRAVQKDIPQATVARLAAYLRVLAMLADDGVLIVSSEELAVAAGV
CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECC
NSAKLRKDLSFLGPNGVRGVGYDVAKLRARIEDVLGLSDGHRVILIGAGNLGRALVGYGG
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCCCC
FRRRGFTVVGIYDNDPAVIGRAVAGLVVRDIARLAADVAELHPTIAVLAVPDEAAQGVCD
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH
QLVAAGLQSILSFAALGLSAPPTVEVRRVDLAVEMQLLSFERARNAEPEPLPEAASSGRI
HHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCE
ARRVPGGHTPAAPAAIQRSAAHAATSHTAMEPTSKGSVVTP
EECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEQHETPGGVSGGALRAVQKDIPQATVARLAAYLRVLAMLADDGVLIVSSEELAVAAGV
CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECC
NSAKLRKDLSFLGPNGVRGVGYDVAKLRARIEDVLGLSDGHRVILIGAGNLGRALVGYGG
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCCCC
FRRRGFTVVGIYDNDPAVIGRAVAGLVVRDIARLAADVAELHPTIAVLAVPDEAAQGVCD
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH
QLVAAGLQSILSFAALGLSAPPTVEVRRVDLAVEMQLLSFERARNAEPEPLPEAASSGRI
HHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCE
ARRVPGGHTPAAPAAIQRSAAHAATSHTAMEPTSKGSVVTP
EECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA