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The map label for this gene is dhaR [C]

Identifier: 54027038

GI number: 54027038

Start: 5362197

End: 5363546

Strand: Reverse

Name: dhaR [C]

Synonym: nfa50640

Alternate gene names: 54027038

Gene position: 5363546-5362197 (Counterclockwise)

Preceding gene: 54027039

Following gene: 54027037

Centisome position: 89.08

GC content: 71.63

Gene sequence:

>1350_bases
ATGGTCAGCAATCTTGCAGGTGGGCGGCCCCCACGGCACGGCGTCGAGCCCGGCACGCAACTCGGCGCACTGGAAGCCTA
TGCCGCACAAGCCCATGGATACCTCAGCGCGGGCGGTGAACAGCTCTCGCAGCTGGCCGGACTGCTGCGCCCGCTGGTGC
TGGAATCCTGGCTGCGCAGCCTGCGCAGCGGCGTCGACCCGATGGATGTGCTCAGTGATCGCGGGCTGCGCGGTGCCGAT
CTGCACCGCTACCGCGACGCGCACCCGTTGGCCGCGCTGATGCCGCTGATCGACAAACTCCTCGTCCAGGACGCCGCGCG
CAGCGGCCTGATCGTCGCCGTCGCCGACCAGTTCGGCCGGGTGCTGTCGGTGCACGGCAATCCCGACCGGGTCGCCGCCG
CGGCCGAGGTCGGCCTGCGCGCGGGCGACGATCTGAGCGAACGCCGCATCGGCACCAATGCCGTCGGCCTGGTGGTGCGC
ACCGGCCGGGCGACCTGGATCCACGGCCCCGAGCACTTCCTGCATCGCATGCACCAGATCACCGGCGCCGCCGCGCCCGT
GCACGATCCCGACGGAAGGCTCGTCGGCGTGCTGATGATCGCCGGTGGCGTGCGGGTGGCCAAACCGGAGATTCTCGCGC
TGGTCAAGGCGACCGCGACGGCGGCGGAGATGGACCTGCTGCTCACCGCCATGCGATCCGGTGGCGGCAAACGCGAGCCT
GCGCCGCCGGAGTCGCGAGCGCTGTCGCTCGAGGTGCTCGGTCTCGGTCAGCCGCAACTGACGGTCGACGGCGACCGGGT
GCCGCTGTCGCAGCGGCACGCCGAGATCCTGCTGCTGCTCGCCGAACATCCCGAGGGACTCGGCGCCGACCATCTCGCCC
TGCTGCTCGACGACACCGACCTGGACAACGGCACCATCCGCGCGGCCATGTCGCGCCTGCGGACGGTGGTCGGCCCCAGT
GTGGTCGGCTCGCGGCCCTACCGTCTACGGGTGCCGGTCGCAACCGATGTCGACGCCCTGCGCGCGGCGCTGGACACCGG
TGATGTCGAATCCGCATTACGCCTCTACGCCGGTCCGGTGCTGCCCCGGTCGAGTGCGCCGGGGATCGCCGACATTCGTG
ACGAACTGCGGGTGCGACTGCGCGCCGCGGTCCTCGGCTCCGGCGACAGCGCGGTGTTGCGCCGGTGGACGGCCGGGCCG
GAAGGGCGGGACGACGCCGCCGCCTGGGCCGCCTATCGCGCCTCGGTCGATCGCGATTCGCCGCTGTATGCGCAGATCGA
GGCCAAGATCCGGGTGCTCGACCGCCGACTGGGCGCCGATGCAACGCGGATGCAACGTTCCGGCTCATAG

Upstream 100 bases:

>100_bases
CGCGAAGGTATGGAGCCGATGTGACCTGTCGGACAAACCGAACATCCACCCCTCGCCGGGGAAAACGCGCCGGTACAGTT
TGGGGCGGAAAGAAAGGCAA

Downstream 100 bases:

>100_bases
TCTGCACACCCGACAGTGTGGTAGCTCACACACGCGGCCGCTCGGCGTCGCGTGCCTCGCGCTGTGCCCGGGTTTTCTAC
CCCGTAAGACCATCTGGTCA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MVSNLAGGRPPRHGVEPGTQLGALEAYAAQAHGYLSAGGEQLSQLAGLLRPLVLESWLRSLRSGVDPMDVLSDRGLRGAD
LHRYRDAHPLAALMPLIDKLLVQDAARSGLIVAVADQFGRVLSVHGNPDRVAAAAEVGLRAGDDLSERRIGTNAVGLVVR
TGRATWIHGPEHFLHRMHQITGAAAPVHDPDGRLVGVLMIAGGVRVAKPEILALVKATATAAEMDLLLTAMRSGGGKREP
APPESRALSLEVLGLGQPQLTVDGDRVPLSQRHAEILLLLAEHPEGLGADHLALLLDDTDLDNGTIRAAMSRLRTVVGPS
VVGSRPYRLRVPVATDVDALRAALDTGDVESALRLYAGPVLPRSSAPGIADIRDELRVRLRAAVLGSGDSAVLRRWTAGP
EGRDDAAAWAAYRASVDRDSPLYAQIEAKIRVLDRRLGADATRMQRSGS

Sequences:

>Translated_449_residues
MVSNLAGGRPPRHGVEPGTQLGALEAYAAQAHGYLSAGGEQLSQLAGLLRPLVLESWLRSLRSGVDPMDVLSDRGLRGAD
LHRYRDAHPLAALMPLIDKLLVQDAARSGLIVAVADQFGRVLSVHGNPDRVAAAAEVGLRAGDDLSERRIGTNAVGLVVR
TGRATWIHGPEHFLHRMHQITGAAAPVHDPDGRLVGVLMIAGGVRVAKPEILALVKATATAAEMDLLLTAMRSGGGKREP
APPESRALSLEVLGLGQPQLTVDGDRVPLSQRHAEILLLLAEHPEGLGADHLALLLDDTDLDNGTIRAAMSRLRTVVGPS
VVGSRPYRLRVPVATDVDALRAALDTGDVESALRLYAGPVLPRSSAPGIADIRDELRVRLRAAVLGSGDSAVLRRWTAGP
EGRDDAAAWAAYRASVDRDSPLYAQIEAKIRVLDRRLGADATRMQRSGS
>Mature_449_residues
MVSNLAGGRPPRHGVEPGTQLGALEAYAAQAHGYLSAGGEQLSQLAGLLRPLVLESWLRSLRSGVDPMDVLSDRGLRGAD
LHRYRDAHPLAALMPLIDKLLVQDAARSGLIVAVADQFGRVLSVHGNPDRVAAAAEVGLRAGDDLSERRIGTNAVGLVVR
TGRATWIHGPEHFLHRMHQITGAAAPVHDPDGRLVGVLMIAGGVRVAKPEILALVKATATAAEMDLLLTAMRSGGGKREP
APPESRALSLEVLGLGQPQLTVDGDRVPLSQRHAEILLLLAEHPEGLGADHLALLLDDTDLDNGTIRAAMSRLRTVVGPS
VVGSRPYRLRVPVATDVDALRAALDTGDVESALRLYAGPVLPRSSAPGIADIRDELRVRLRAAVLGSGDSAVLRRWTAGP
EGRDDAAAWAAYRASVDRDSPLYAQIEAKIRVLDRRLGADATRMQRSGS

Specific function: Required For Sigma-54-Dependent Transcription Of The Glycerol Utilization Dha Operon (Probable). [C]

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47609; Mature: 47609

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSNLAGGRPPRHGVEPGTQLGALEAYAAQAHGYLSAGGEQLSQLAGLLRPLVLESWLRS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
LRSGVDPMDVLSDRGLRGADLHRYRDAHPLAALMPLIDKLLVQDAARSGLIVAVADQFGR
HHCCCCHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
VLSVHGNPDRVAAAAEVGLRAGDDLSERRIGTNAVGLVVRTGRATWIHGPEHFLHRMHQI
EEEECCCCHHHHHHHHHCCCCCCCHHHHCCCCCEEEEEEECCCEEEECCHHHHHHHHHHH
TGAAAPVHDPDGRLVGVLMIAGGVRVAKPEILALVKATATAAEMDLLLTAMRSGGGKREP
HCCCCCCCCCCCCEEEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
APPESRALSLEVLGLGQPQLTVDGDRVPLSQRHAEILLLLAEHPEGLGADHLALLLDDTD
CCCCHHEEEEEEEECCCCCEEECCCCCCHHHCCCEEEEEEECCCCCCCCCCEEEEEECCC
LDNGTIRAAMSRLRTVVGPSVVGSRPYRLRVPVATDVDALRAALDTGDVESALRLYAGPV
CCCHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHCCC
LPRSSAPGIADIRDELRVRLRAAVLGSGDSAVLRRWTAGPEGRDDAAAWAAYRASVDRDS
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
PLYAQIEAKIRVLDRRLGADATRMQRSGS
CCHHHHHHHHHHHHHHHCCCHHHHHCCCC
>Mature Secondary Structure
MVSNLAGGRPPRHGVEPGTQLGALEAYAAQAHGYLSAGGEQLSQLAGLLRPLVLESWLRS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
LRSGVDPMDVLSDRGLRGADLHRYRDAHPLAALMPLIDKLLVQDAARSGLIVAVADQFGR
HHCCCCHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
VLSVHGNPDRVAAAAEVGLRAGDDLSERRIGTNAVGLVVRTGRATWIHGPEHFLHRMHQI
EEEECCCCHHHHHHHHHCCCCCCCHHHHCCCCCEEEEEEECCCEEEECCHHHHHHHHHHH
TGAAAPVHDPDGRLVGVLMIAGGVRVAKPEILALVKATATAAEMDLLLTAMRSGGGKREP
HCCCCCCCCCCCCEEEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
APPESRALSLEVLGLGQPQLTVDGDRVPLSQRHAEILLLLAEHPEGLGADHLALLLDDTD
CCCCHHEEEEEEEECCCCCEEECCCCCCHHHCCCEEEEEEECCCCCCCCCCEEEEEECCC
LDNGTIRAAMSRLRTVVGPSVVGSRPYRLRVPVATDVDALRAALDTGDVESALRLYAGPV
CCCHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHCCC
LPRSSAPGIADIRDELRVRLRAAVLGSGDSAVLRRWTAGPEGRDDAAAWAAYRASVDRDS
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
PLYAQIEAKIRVLDRRLGADATRMQRSGS
CCHHHHHHHHHHHHHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7836301 [H]