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The map label for this gene is mce4B [C]

Identifier: 54027025

GI number: 54027025

Start: 5308174

End: 5309202

Strand: Reverse

Name: mce4B [C]

Synonym: nfa50510

Alternate gene names: 54027025

Gene position: 5309202-5308174 (Counterclockwise)

Preceding gene: 54027026

Following gene: 54027024

Centisome position: 88.17

GC content: 67.06

Gene sequence:

>1029_bases
GTGAGCGTGAAATCCGGAAAGGCGCTGGCCGGGTTCAGCCTCTTCGCCGTCCTGGCGATCGTGCTGACCTACACGATCTG
GTCCACCTTGCAACGCTCGGTGCCCGGGGACACCCATTCCTACTCGGCGACATTCACCGACGTGATGGGAGTTCGTGTCG
GTGACGACGTCCGCATGGCGGGCGTCCGGGTGGGCCGGGTCGACAAGATCGACTTCGACGAGGGGTACCTGGCCCGCATC
GACTTCCGCATCGAGCACAAGCAACGGCTGACCACCACCACGAAAGCCCTGGTGCGGTACCAGAACCTGATCGGCCAGCG
CTACATCGCGCTGGTGCCCGGCGAGGGGGAGGGCGAGCCGCTCGCACCCGGCGGGCACATCCCGGTCGAGCGCACCGAGC
CGTCCTTCGACGTGTCGGCGTTGCTGTCGGGGTTCGAGCCGCTGTTCTCGGTGCTGCAACCCGACCAGGTGAACTCGCTG
TCGGAGACGCTGGTCCAGGCGTTGCAGGGCGACAACGTATCGCTGTCGACGCTGATCATGCAGGCTGCCGACCTGGCGGC
CACCTTCGGCCAGCGCGACGAGATCCTCGGGCAGGTGATCGCCAACCTGAGTTCGGTGATCTCCGGCCTAGCCAACCGCA
GCACCGAACTGGAAACCCTCATCACCCAGTCCAAAGCGCTGGTCGAGGCCCTCTACGCCGAGGGTGAGCTGCTCAAGTCC
TCGGTCGATCAGGTCGCGACCTCCACCGATTCGCTGGTCGGCCTGCTCCAGCAGGTCAAGCCGGACATGGCGCGGGCGCA
GAACGAGGCGACCACCGGTGTGGCGCTGCTGCTGCTCAACGGCGCCGCGCTGGACCGCGCCGCGGTCGAGGTGCCCGGGC
TGCTGACCTCACTGGCCCGCTTCACCAGCTACGGCGCCTACGGCAACGCCTACTTCTGCAGCCTGGACGTCTCGTTGTGG
GGTGTCGTCCTGCCCCCGGGCCTGTTCTCCCAGGTCGGCGGTAACTCGCATTCGGAGGTGTGCCGCTGA

Upstream 100 bases:

>100_bases
TCGGCGGCCGTCCGACGGCCGCGCAGCTGCTGCTGCTGACACCCGTGCTGGCCGGTGGCGAAGTGACCGTGTACGAAGAG
GTCCCCGCGGAAGGGGGTGC

Downstream 100 bases:

>100_bases
TGGCGCGACTGCCCCTGCCCCGGTTCGGGGCCAACCGCTTCCTCTGGCTCGGCCTGGCCGCGGCCGCGACGGTGGTGCTG
CTGCTCGTCGGCTCCAGCAT

Product: putative Mce family protein

Products: NA

Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family B; MCE Family Protein; Mammalian Cell Entry Related Domain Protein; MCE-Family Protein; Mce Family B; Mce Family Protein Mce5B; Mammalian Cell Entry-Like Domain-Containing Protein; Mce Family Lipob; Virulence Factor MCE-Like Protein; Mce-Related Protein; MCE-Family

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSVKSGKALAGFSLFAVLAIVLTYTIWSTLQRSVPGDTHSYSATFTDVMGVRVGDDVRMAGVRVGRVDKIDFDEGYLARI
DFRIEHKQRLTTTTKALVRYQNLIGQRYIALVPGEGEGEPLAPGGHIPVERTEPSFDVSALLSGFEPLFSVLQPDQVNSL
SETLVQALQGDNVSLSTLIMQAADLAATFGQRDEILGQVIANLSSVISGLANRSTELETLITQSKALVEALYAEGELLKS
SVDQVATSTDSLVGLLQQVKPDMARAQNEATTGVALLLLNGAALDRAAVEVPGLLTSLARFTSYGAYGNAYFCSLDVSLW
GVVLPPGLFSQVGGNSHSEVCR

Sequences:

>Translated_342_residues
MSVKSGKALAGFSLFAVLAIVLTYTIWSTLQRSVPGDTHSYSATFTDVMGVRVGDDVRMAGVRVGRVDKIDFDEGYLARI
DFRIEHKQRLTTTTKALVRYQNLIGQRYIALVPGEGEGEPLAPGGHIPVERTEPSFDVSALLSGFEPLFSVLQPDQVNSL
SETLVQALQGDNVSLSTLIMQAADLAATFGQRDEILGQVIANLSSVISGLANRSTELETLITQSKALVEALYAEGELLKS
SVDQVATSTDSLVGLLQQVKPDMARAQNEATTGVALLLLNGAALDRAAVEVPGLLTSLARFTSYGAYGNAYFCSLDVSLW
GVVLPPGLFSQVGGNSHSEVCR
>Mature_341_residues
SVKSGKALAGFSLFAVLAIVLTYTIWSTLQRSVPGDTHSYSATFTDVMGVRVGDDVRMAGVRVGRVDKIDFDEGYLARID
FRIEHKQRLTTTTKALVRYQNLIGQRYIALVPGEGEGEPLAPGGHIPVERTEPSFDVSALLSGFEPLFSVLQPDQVNSLS
ETLVQALQGDNVSLSTLIMQAADLAATFGQRDEILGQVIANLSSVISGLANRSTELETLITQSKALVEALYAEGELLKSS
VDQVATSTDSLVGLLQQVKPDMARAQNEATTGVALLLLNGAALDRAAVEVPGLLTSLARFTSYGAYGNAYFCSLDVSLWG
VVLPPGLFSQVGGNSHSEVCR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36499; Mature: 36368

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKSGKALAGFSLFAVLAIVLTYTIWSTLQRSVPGDTHSYSATFTDVMGVRVGDDVRMA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCEECCCCHHHH
GVRVGRVDKIDFDEGYLARIDFRIEHKQRLTTTTKALVRYQNLIGQRYIALVPGEGEGEP
CEEECCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
LAPGGHIPVERTEPSFDVSALLSGFEPLFSVLQPDQVNSLSETLVQALQGDNVSLSTLIM
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHH
QAADLAATFGQRDEILGQVIANLSSVISGLANRSTELETLITQSKALVEALYAEGELLKS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVDQVATSTDSLVGLLQQVKPDMARAQNEATTGVALLLLNGAALDRAAVEVPGLLTSLAR
HHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHEEECCCHHHHHHHHHHHHHHHHHH
FTSYGAYGNAYFCSLDVSLWGVVLPPGLFSQVGGNSHSEVCR
HHHCCCCCCEEEEEECHHHHHHHCCCHHHHHHCCCCHHHHCC
>Mature Secondary Structure 
SVKSGKALAGFSLFAVLAIVLTYTIWSTLQRSVPGDTHSYSATFTDVMGVRVGDDVRMA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCEECCCCHHHH
GVRVGRVDKIDFDEGYLARIDFRIEHKQRLTTTTKALVRYQNLIGQRYIALVPGEGEGEP
CEEECCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
LAPGGHIPVERTEPSFDVSALLSGFEPLFSVLQPDQVNSLSETLVQALQGDNVSLSTLIM
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHH
QAADLAATFGQRDEILGQVIANLSSVISGLANRSTELETLITQSKALVEALYAEGELLKS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVDQVATSTDSLVGLLQQVKPDMARAQNEATTGVALLLLNGAALDRAAVEVPGLLTSLAR
HHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHEEECCCHHHHHHHHHHHHHHHHHH
FTSYGAYGNAYFCSLDVSLWGVVLPPGLFSQVGGNSHSEVCR
HHHCCCCCCEEEEEECHHHHHHHCCCHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA