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The map label for this gene is 54026978

Identifier: 54026978

GI number: 54026978

Start: 5221232

End: 5221609

Strand: Reverse

Name: 54026978

Synonym: nfa50040

Alternate gene names: NA

Gene position: 5221609-5221232 (Counterclockwise)

Preceding gene: 54026982

Following gene: 54026977

Centisome position: 86.72

GC content: 72.22

Gene sequence:

>378_bases
GTGGACGGCGCTCGAGCAACACCTCGATGCCCACCGGCCGACCGCCGCCGCATGTGTTCGGCGTGCAGATCGTCGAGCTT
CGCGTCTGCGGCGGCCATCTCCTCCGCGGTCAGCGGCCCGGGTCTCGGCGACGCCGGACGTCACGGTGATGTGCAGCCCG
CGCCGTCGAGCGCGGCATCGAGGGTCGCCGGTTCCGTGTGCGTGCCCGCCACCACCCCGGCGCCCGCTGCGAGCAGATCA
ACCGCCCGCTACGGATCACGGCTGAGCGCCGAGACCCTCCGGCCCTGCCGCAGCAGCTCCGCCACCACGTGCCGTCCCGT
GTTTCCCGTTGCGCCCGTGACCAGTATCGATGACGAATTCCTCCGGGCGCGACGCTAG

Upstream 100 bases:

>100_bases
GGGCGTTCGCGAGCCGTGCGAGCATCTCGCGATTTCCCCGCACAGCCTGCGACAACGCCTCGCAGTCGAGGACGAAGGTC
TGCGGTACCCCGGAGACTCG

Downstream 100 bases:

>100_bases
GATCTCAACCAACTCGAGGTCAGCCGCCGGGGGCCTCGAGTGATAGTTCTGTCACCTCCAGGCGGTCAGAGGAGCCGACA
AATCCACCGCTGATAGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MDGARATPRCPPADRRRMCSACRSSSFASAAAISSAVSGPGLGDAGRHGDVQPAPSSAASRVAGSVCVPATTPAPAASRS
TARYGSRLSAETLRPCRSSSATTCRPVFPVAPVTSIDDEFLRARR

Sequences:

>Translated_125_residues
MDGARATPRCPPADRRRMCSACRSSSFASAAAISSAVSGPGLGDAGRHGDVQPAPSSAASRVAGSVCVPATTPAPAASRS
TARYGSRLSAETLRPCRSSSATTCRPVFPVAPVTSIDDEFLRARR
>Mature_125_residues
MDGARATPRCPPADRRRMCSACRSSSFASAAAISSAVSGPGLGDAGRHGDVQPAPSSAASRVAGSVCVPATTPAPAASRS
TARYGSRLSAETLRPCRSSSATTCRPVFPVAPVTSIDDEFLRARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12749; Mature: 12749

Theoretical pI: Translated: 11.33; Mature: 11.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGARATPRCPPADRRRMCSACRSSSFASAAAISSAVSGPGLGDAGRHGDVQPAPSSAAS
CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
RVAGSVCVPATTPAPAASRSTARYGSRLSAETLRPCRSSSATTCRPVFPVAPVTSIDDEF
HHCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
LRARR
HHHCC
>Mature Secondary Structure
MDGARATPRCPPADRRRMCSACRSSSFASAAAISSAVSGPGLGDAGRHGDVQPAPSSAAS
CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
RVAGSVCVPATTPAPAASRSTARYGSRLSAETLRPCRSSSATTCRPVFPVAPVTSIDDEF
HHCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
LRARR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA