Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026963

Identifier: 54026963

GI number: 54026963

Start: 5203916

End: 5204992

Strand: Reverse

Name: 54026963

Synonym: nfa49890

Alternate gene names: NA

Gene position: 5204992-5203916 (Counterclockwise)

Preceding gene: 54026964

Following gene: 54026962

Centisome position: 86.44

GC content: 73.26

Gene sequence:

>1077_bases
ATGTCATACCCGACCGGGGGCTCCGGGTACAACACACCCGCGACGCCCTCCGCACCATCCGGTTCCGGCCAGTCGACCGG
TGGCGGCACCGGCGCGAGCGCGACCGGTTCCGCGGCGGCTCCCGCGGCGAAGGGGTTGCCGTTCTTCCTGGTGGTCGGCG
TCGCCGCGCTCGGCGTGATCAACTTCCTGCTCGGCTTCCTGCCGTTCGTGGAGCCGGAAGCCACCAACCCGATGACCGGT
GCGCGGGTGACCGGCGATTCGATCAACGCGTTCGCCACGCTCGGCCTGGCCGGCCTGCTGGCGATGCTGCTGCTCGGCGG
TCTGCTGGCGGCGCTGTCGATCCTGCCCGGCCAGGACTGGAAGGGCGCGGCCGCCGCGGCGTCGGCGGCGGGCTTCCTGG
CGCTGCTGTTCCAGTCCTTCTCACTGCCCGAGGGCGCGGGCGCCGCGTTCGGCTTCTGGGTGGTGCTGTTCCTGGCGCTG
GTGCAGACCGCGCTCGCGGTCGCCGCGGTGCTGTTCGCCGCGGGCATCCTCAAGCCGCCTGCGCCGAAACCGGCGGCACC
GCAGGCTCCGCAGCAGGGTGGCTACGGCCAGCAGGGCGGCTACGGTGCCCCCTCGTACGGCCAGCAGCCCGGTTACGGCC
AGCAGTCGCCGTACGGCCAGAGCCAGCAGCCGTCCTACGGCCAGCAGCCGGGCTACGGCACCGGCCCCCAGTACCAGCAG
CCCCAGCAGCCCTACGGCCAGAGCCAGCCGGGCCAGTCGCCCTACGGCCAGCAGCCCGGGTACGGTCAGCAGCCCGGCCA
ATCCTACGGTCAGCAGCCGGGTTATGGTGCGCCGCAACAGTCTTCGCCCTACGCGAGCGGCGCGCAGCCCCGTCCGGACG
AGAGTGCCACCCAGCACTTCGGTGGCCAGGCCGGTCAGCAGTACGGCCAGCAGGGGTACGGCCAGGCCCAGCAGCAGCCG
GCGCAGCCCGGCCAGCAGGCGGGGCAGCAGCAGGGGCAGCCGTTCGGCGGTGAGAAGAGCGCCGACCCGGCCGCCGACGC
CACCCAGGCGTTCCGGCCCAACGACGACAACAAGTAG

Upstream 100 bases:

>100_bases
CGAACGGTGCTGTTCGGTCGAGGATGACCGGGGCGGGCGCGTGCAGTAGCGTCAGAAGCAATCCAGCCGAAGTTAACGAC
TCGACCTAGGAGACGACGAC

Downstream 100 bases:

>100_bases
TTCGTTCTTCCTCCGCGAGCACCCGGCCCGAACCAGGGCGGGTGCTCGCGGCGCGCCTGCCCCGATCCCGTCGCGAAGGC
TGTCACGCTGAATCTCCATG

Product: antigen 34 kDa family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MSYPTGGSGYNTPATPSAPSGSGQSTGGGTGASATGSAAAPAAKGLPFFLVVGVAALGVINFLLGFLPFVEPEATNPMTG
ARVTGDSINAFATLGLAGLLAMLLLGGLLAALSILPGQDWKGAAAAASAAGFLALLFQSFSLPEGAGAAFGFWVVLFLAL
VQTALAVAAVLFAAGILKPPAPKPAAPQAPQQGGYGQQGGYGAPSYGQQPGYGQQSPYGQSQQPSYGQQPGYGTGPQYQQ
PQQPYGQSQPGQSPYGQQPGYGQQPGQSYGQQPGYGAPQQSSPYASGAQPRPDESATQHFGGQAGQQYGQQGYGQAQQQP
AQPGQQAGQQQGQPFGGEKSADPAADATQAFRPNDDNK

Sequences:

>Translated_358_residues
MSYPTGGSGYNTPATPSAPSGSGQSTGGGTGASATGSAAAPAAKGLPFFLVVGVAALGVINFLLGFLPFVEPEATNPMTG
ARVTGDSINAFATLGLAGLLAMLLLGGLLAALSILPGQDWKGAAAAASAAGFLALLFQSFSLPEGAGAAFGFWVVLFLAL
VQTALAVAAVLFAAGILKPPAPKPAAPQAPQQGGYGQQGGYGAPSYGQQPGYGQQSPYGQSQQPSYGQQPGYGTGPQYQQ
PQQPYGQSQPGQSPYGQQPGYGQQPGQSYGQQPGYGAPQQSSPYASGAQPRPDESATQHFGGQAGQQYGQQGYGQAQQQP
AQPGQQAGQQQGQPFGGEKSADPAADATQAFRPNDDNK
>Mature_357_residues
SYPTGGSGYNTPATPSAPSGSGQSTGGGTGASATGSAAAPAAKGLPFFLVVGVAALGVINFLLGFLPFVEPEATNPMTGA
RVTGDSINAFATLGLAGLLAMLLLGGLLAALSILPGQDWKGAAAAASAAGFLALLFQSFSLPEGAGAAFGFWVVLFLALV
QTALAVAAVLFAAGILKPPAPKPAAPQAPQQGGYGQQGGYGAPSYGQQPGYGQQSPYGQSQQPSYGQQPGYGTGPQYQQP
QQPYGQSQPGQSPYGQQPGYGQQPGQSYGQQPGYGAPQQSSPYASGAQPRPDESATQHFGGQAGQQYGQQGYGQAQQQPA
QPGQQAGQQQGQPFGGEKSADPAADATQAFRPNDDNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35931; Mature: 35800

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYPTGGSGYNTPATPSAPSGSGQSTGGGTGASATGSAAAPAAKGLPFFLVVGVAALGVI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHH
NFLLGFLPFVEPEATNPMTGARVTGDSINAFATLGLAGLLAMLLLGGLLAALSILPGQDW
HHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KGAAAAASAAGFLALLFQSFSLPEGAGAAFGFWVVLFLALVQTALAVAAVLFAAGILKPP
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
APKPAAPQAPQQGGYGQQGGYGAPSYGQQPGYGQQSPYGQSQQPSYGQQPGYGTGPQYQQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PQQPYGQSQPGQSPYGQQPGYGQQPGQSYGQQPGYGAPQQSSPYASGAQPRPDESATQHF
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
GGQAGQQYGQQGYGQAQQQPAQPGQQAGQQQGQPFGGEKSADPAADATQAFRPNDDNK
CCHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SYPTGGSGYNTPATPSAPSGSGQSTGGGTGASATGSAAAPAAKGLPFFLVVGVAALGVI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHH
NFLLGFLPFVEPEATNPMTGARVTGDSINAFATLGLAGLLAMLLLGGLLAALSILPGQDW
HHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KGAAAAASAAGFLALLFQSFSLPEGAGAAFGFWVVLFLALVQTALAVAAVLFAAGILKPP
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
APKPAAPQAPQQGGYGQQGGYGAPSYGQQPGYGQQSPYGQSQQPSYGQQPGYGTGPQYQQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PQQPYGQSQPGQSPYGQQPGYGQQPGQSYGQQPGYGAPQQSSPYASGAQPRPDESATQHF
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
GGQAGQQYGQQGYGQAQQQPAQPGQQAGQQQGQPFGGEKSADPAADATQAFRPNDDNK
CCHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA