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The map label for this gene is 54026948

Identifier: 54026948

GI number: 54026948

Start: 5187985

End: 5189310

Strand: Reverse

Name: 54026948

Synonym: nfa49740

Alternate gene names: NA

Gene position: 5189310-5187985 (Counterclockwise)

Preceding gene: 54026958

Following gene: 54026947

Centisome position: 86.18

GC content: 74.96

Gene sequence:

>1326_bases
GTGCTGCCTGATCCCGCTCCACTCCCGCCCCGGCCCGACCGGCGGACGCCGGTCCTGCTCGTGGCCGGCCTGTCCGGCCG
CGCGAGCGCCGCGGTCGACCGGGCGGCCGCGGCGCTGGCACATGCCGAGGGCACCGTCGTCGTCCGGCATCACCTCGAAG
ACCTGCGCGAGGGCGTCGTGCGCCGCACCCTGCGCACCGTCCTCGCCACCACCGAGACGGTGCTCGAGTTGGCGCACGGC
TGTGTGTCCTGCACCCTGCGCGCCGACCTGCTCCCGCTGCTGTGCACGCTGGCCGCCCGCGAGTCGGTGCACCGGATCGT
GCTCGAACTGGATCCGGCCTTCGAGGCCGAGGCGGTCTGCCAGGCCATCGAGGATGTCGTCGTCACCGGGGTGGTCGGCC
GGGTGGACGGGCCTGCGGCCCGCGACGTCCGCATCGAGGCGGTGCTCACCTGCGTCGACGCCGCGTCCTGGCTCGCCGAC
GCGACCGGTGAGGACACCCTCGCCGAGCGCGGCCTGGCCACCGCCGACGACGACCGGACCGTCGCCCAGGTCGCGGTCGG
ACAGGTCGACTTCGCCGACGCCCTCGTCGCGCTCGGCCCGGCATCCGATCCGATCGAGCACGACCGGCTCACCGCCGTGC
TCGCCCGGCTGGTTCCCGAGGCGCCGGTGACGTGGGTCGACTCGCCCGACGCGATCACCGCCGCCGAGATCGAGGCGCTG
CTCACACGGATCCCCGCGCACTCGCGGCGCGGCCGGGTCTTCGACGCGCACGCACCGCTGCTGCGCGGGCAGCCCTCGCT
GCTCACCGAGCACGGCGTGACGCTGGTGGAGTTCGCCGCGAGCAGGCCGTTCCACCCCGCCCGGCTGCACGACGCCCTCG
ACGTGCTGCTCGAGGGCGTGGTGACCGCCCGCGGCAGGTTGTGGCTGGCCACCCAACCCGACGAGGTGGTGTGGCTGGAG
TCGGCCGGTGGCGGCCTGCGGGTCGGCGGTGCGGGTCCGTGGCTGGCCGCGATGAGCGCCGAGGACTACGAGCGGGCCGA
CCCGACCCGCCGCGCGCTGGCCGCGCTCGGCTGGGACGAGCGGTTCGGCGACCGGCACATCTCGCTGGTGATCCTGGCCC
ACGAGGCCGACCCCGCCGAGATCCGCCGCGCACTGCACTGGGCCCTGGTCGAGGACGACGAACTGCGCCTGGTGGACCGG
GCACCCGAGCGGGTCGCCCGCTGGGAGGACCCGTTCGGCGAGTGGCACGAGGAACCGTGCGCCGACCCGGGCGAACCGAT
CGAGGACATCGCGTGGCCGAAAGGCCGGACAGGAGAAGGACAATGA

Upstream 100 bases:

>100_bases
GCCTCCTCCTGTTGATGACAATCGTTTTCGACAATGAACGCCGGAGACTGTACCGTTATGCCCGAGCAAATGACAATCGT
TATCGAAAGGGGTTCCGGTG

Downstream 100 bases:

>100_bases
AGGCGGGCATCCACCCCGACTACCACCCCGTGGTGTTCGAGGACTCGAGCACCGGCAAGCGCTTCCTCACCAGATCGACC
GCGACGAGCGAGCGCACCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MLPDPAPLPPRPDRRTPVLLVAGLSGRASAAVDRAAAALAHAEGTVVVRHHLEDLREGVVRRTLRTVLATTETVLELAHG
CVSCTLRADLLPLLCTLAARESVHRIVLELDPAFEAEAVCQAIEDVVVTGVVGRVDGPAARDVRIEAVLTCVDAASWLAD
ATGEDTLAERGLATADDDRTVAQVAVGQVDFADALVALGPASDPIEHDRLTAVLARLVPEAPVTWVDSPDAITAAEIEAL
LTRIPAHSRRGRVFDAHAPLLRGQPSLLTEHGVTLVEFAASRPFHPARLHDALDVLLEGVVTARGRLWLATQPDEVVWLE
SAGGGLRVGGAGPWLAAMSAEDYERADPTRRALAALGWDERFGDRHISLVILAHEADPAEIRRALHWALVEDDELRLVDR
APERVARWEDPFGEWHEEPCADPGEPIEDIAWPKGRTGEGQ

Sequences:

>Translated_441_residues
MLPDPAPLPPRPDRRTPVLLVAGLSGRASAAVDRAAAALAHAEGTVVVRHHLEDLREGVVRRTLRTVLATTETVLELAHG
CVSCTLRADLLPLLCTLAARESVHRIVLELDPAFEAEAVCQAIEDVVVTGVVGRVDGPAARDVRIEAVLTCVDAASWLAD
ATGEDTLAERGLATADDDRTVAQVAVGQVDFADALVALGPASDPIEHDRLTAVLARLVPEAPVTWVDSPDAITAAEIEAL
LTRIPAHSRRGRVFDAHAPLLRGQPSLLTEHGVTLVEFAASRPFHPARLHDALDVLLEGVVTARGRLWLATQPDEVVWLE
SAGGGLRVGGAGPWLAAMSAEDYERADPTRRALAALGWDERFGDRHISLVILAHEADPAEIRRALHWALVEDDELRLVDR
APERVARWEDPFGEWHEEPCADPGEPIEDIAWPKGRTGEGQ
>Mature_441_residues
MLPDPAPLPPRPDRRTPVLLVAGLSGRASAAVDRAAAALAHAEGTVVVRHHLEDLREGVVRRTLRTVLATTETVLELAHG
CVSCTLRADLLPLLCTLAARESVHRIVLELDPAFEAEAVCQAIEDVVVTGVVGRVDGPAARDVRIEAVLTCVDAASWLAD
ATGEDTLAERGLATADDDRTVAQVAVGQVDFADALVALGPASDPIEHDRLTAVLARLVPEAPVTWVDSPDAITAAEIEAL
LTRIPAHSRRGRVFDAHAPLLRGQPSLLTEHGVTLVEFAASRPFHPARLHDALDVLLEGVVTARGRLWLATQPDEVVWLE
SAGGGLRVGGAGPWLAAMSAEDYERADPTRRALAALGWDERFGDRHISLVILAHEADPAEIRRALHWALVEDDELRLVDR
APERVARWEDPFGEWHEEPCADPGEPIEDIAWPKGRTGEGQ

Specific function: Unknown

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 47466; Mature: 47466

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPDPAPLPPRPDRRTPVLLVAGLSGRASAAVDRAAAALAHAEGTVVVRHHLEDLREGVV
CCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH
RRTLRTVLATTETVLELAHGCVSCTLRADLLPLLCTLAARESVHRIVLELDPAFEAEAVC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHH
QAIEDVVVTGVVGRVDGPAARDVRIEAVLTCVDAASWLADATGEDTLAERGLATADDDRT
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHH
VAQVAVGQVDFADALVALGPASDPIEHDRLTAVLARLVPEAPVTWVDSPDAITAAEIEAL
HHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHH
LTRIPAHSRRGRVFDAHAPLLRGQPSLLTEHGVTLVEFAASRPFHPARLHDALDVLLEGV
HHHCCCCCCCCCEEECCCCCCCCCCCHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
VTARGRLWLATQPDEVVWLESAGGGLRVGGAGPWLAAMSAEDYERADPTRRALAALGWDE
HHHCCEEEEEECCCCEEEEECCCCCEEECCCCCHHHHCCCHHHHHCCHHHHHHHHCCCHH
RFGDRHISLVILAHEADPAEIRRALHWALVEDDELRLVDRAPERVARWEDPFGEWHEEPC
HCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHCCCCHHHHCCCCC
ADPGEPIEDIAWPKGRTGEGQ
CCCCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLPDPAPLPPRPDRRTPVLLVAGLSGRASAAVDRAAAALAHAEGTVVVRHHLEDLREGVV
CCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH
RRTLRTVLATTETVLELAHGCVSCTLRADLLPLLCTLAARESVHRIVLELDPAFEAEAVC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHH
QAIEDVVVTGVVGRVDGPAARDVRIEAVLTCVDAASWLADATGEDTLAERGLATADDDRT
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHH
VAQVAVGQVDFADALVALGPASDPIEHDRLTAVLARLVPEAPVTWVDSPDAITAAEIEAL
HHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHH
LTRIPAHSRRGRVFDAHAPLLRGQPSLLTEHGVTLVEFAASRPFHPARLHDALDVLLEGV
HHHCCCCCCCCCEEECCCCCCCCCCCHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
VTARGRLWLATQPDEVVWLESAGGGLRVGGAGPWLAAMSAEDYERADPTRRALAALGWDE
HHHCCEEEEEECCCCEEEEECCCCCEEECCCCCHHHHCCCHHHHHCCHHHHHHHHCCCHH
RFGDRHISLVILAHEADPAEIRRALHWALVEDDELRLVDRAPERVARWEDPFGEWHEEPC
HCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHCCCCHHHHCCCCC
ADPGEPIEDIAWPKGRTGEGQ
CCCCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]