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The map label for this gene is rpmF

Identifier: 54026946

GI number: 54026946

Start: 5187547

End: 5187720

Strand: Reverse

Name: rpmF

Synonym: nfa49720

Alternate gene names: 54026946

Gene position: 5187720-5187547 (Counterclockwise)

Preceding gene: 54026947

Following gene: 54026945

Centisome position: 86.16

GC content: 72.41

Gene sequence:

>174_bases
ATGGCGGTTCCGAAGCGGCGGATGTCGAGGTCGAACACGCGCAGCAGGCGCAGCCAGTGGAAGGCGAAGGCGCCGGACCT
GGTCGAGGTGACCGTCGCGGGCGTGCCGCGCAAGGTGCCGCGGCGGCTGGTCGCGGCGATCCGGCGGGGTCTGATCGATC
CCGAGCGGCTCTGA

Upstream 100 bases:

>100_bases
TTCTGGACCGGCGCCCAGCGCCTGCTGGACACCCAGGGGCGGGTGGAGAAGTTCAACCGCAAGTACGGGCGCCGGGTGCG
CGGCGGACAGGAGGGCTGAG

Downstream 100 bases:

>100_bases
GCAGCCGACGGCGAATGGCAGCCGACGGCGAATGGCAGCCGGCGACGAATGGCAGCCGACGACGAATGGCAGCCGGCGAC
GAATGAGGGGGAGTGGGGTG

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MAVPKRRMSRSNTRSRRSQWKAKAPDLVEVTVAGVPRKVPRRLVAAIRRGLIDPERL

Sequences:

>Translated_57_residues
MAVPKRRMSRSNTRSRRSQWKAKAPDLVEVTVAGVPRKVPRRLVAAIRRGLIDPERL
>Mature_56_residues
AVPKRRMSRSNTRSRRSQWKAKAPDLVEVTVAGVPRKVPRRLVAAIRRGLIDPERL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL322_NOCFA (Q5YPR7)

Other databases:

- EMBL:   AP006618
- RefSeq:   YP_121188.1
- ProteinModelPortal:   Q5YPR7
- SMR:   Q5YPR7
- GeneID:   3111498
- GenomeReviews:   AP006618_GR
- KEGG:   nfa:nfa49720
- NMPDR:   fig|247156.1.peg.4779
- HOGENOM:   HBG728381
- OMA:   THSRRSQ
- ProtClustDB:   PRK01110
- BioCyc:   NFAR247156:NFA49720-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p

EC number: NA

Molecular weight: Translated: 6534; Mature: 6403

Theoretical pI: Translated: 12.65; Mature: 12.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKRRMSRSNTRSRRSQWKAKAPDLVEVTVAGVPRKVPRRLVAAIRRGLIDPERL
CCCCHHHHHHHHHHHHHHHHCCCCCCEEEHHCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AVPKRRMSRSNTRSRRSQWKAKAPDLVEVTVAGVPRKVPRRLVAAIRRGLIDPERL
CCCHHHHHHHHHHHHHHHHCCCCCCEEEHHCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA