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The map label for this gene is 54026924

Identifier: 54026924

GI number: 54026924

Start: 5167960

End: 5169270

Strand: Reverse

Name: 54026924

Synonym: nfa49500

Alternate gene names: NA

Gene position: 5169270-5167960 (Counterclockwise)

Preceding gene: 54026925

Following gene: 54026920

Centisome position: 85.85

GC content: 72.16

Gene sequence:

>1311_bases
ATGCCGAATTCGATCTTGTGGATCGGCCTGGTCGTGCTCTGGGTCTTCGTCCTGTTCCCGATTCTCGCCGACCGGCATCC
GAGGATCCGGCAGACGACCGACGCCGCGCTCGCGACCCGGGTATTGCACCGCGGCGGTTCCAAACGGCGCCTGCGCTATC
GACCGAACCGAGCGCGGAGAAAGCGTTTCCACAGCGATGATGCGGAGGACCGGATGAGCACACCGGCCGACGAGAAAATC
ACCGATACCGACGACGACGCCGTGACCGGCACGTCCGACGAAGCCGGACACGGCGGTACGCCGTCCGACTCCGACATCGC
CGATTCCGCACCGCGCGAACCGGATTCGCCGGACGACGATGCGCTGCGCCGCGCCCGCGGCGAGCGGGACGGCGAAATCG
ACGCGGACGCCGATGATTCCGCCGACGCGGAGATCGCGGAAAAGACGCAGGACGGCGAGAAAGCACGCGTCCCGGCCGAT
TCCGACGATGAACCGACCGCCGATGAGCCCGGGCACGGCCGGACCCGCGCCGAGTCGTCCGGTGAGGACGGTCGGGCGGC
CACCGACGAGGACGACACCGCCGAGGACGCCACCGCCGACGACCACGCAGCCCCCGGACACGAGGACGAGCCGCGCCCGC
GCCGCGAACGCGTCACCGCCCGGATTCCACCCGCCAGGTCGGCCGTGCCGGTCCGCGCGCCCGAACCGGCGGCCGAGTAC
GACGCCCAGTTCGATCAGGCAGGCGAAGATCGAGCCGGGTTCGACCACGCCGAGGATTCCGCCGACGAGGACGAGCCGGA
CTTCGTGCCGACCCGGCGGGGACGCGGCGGCTACGACCCCGAAGCCGACGCGATCGCCCGCGCCGCCCGCTACACCTTCC
GGCAGCGCGCGGTGCTGGCCCTGTTGCTCACCGCGATCATGTCCGGCGCGCTCGCCTTGATCCTCACGCCGCTGTTCTGG
TGGGCGTGTGGCCTCTCGGTCGTCGTGCTGGCCACCTACCTGGCCTACCTGCGCAAGCAGGTGCGCATGGAAGAGGAGAT
CCGCAGGCGCCGCGCCGCCCGGCTGGCCCGCCGCCGCGGCGAGCCGGTGCCCGAGCAGGCCGACGACCACGAGGACGACG
AGGACGAGCACGCCACCGCCCGCGGCGGCATGGACCGCGCCACCGCCCGCGCCCTCCGCCGCCGCTCCAGCCTGCTCGAC
GTCGACGACGAAGACCCCCTCTTCGAACACCTGGAGGCCTTCGAACCCGCCGCCGCGCGCGCCCTGCGCCACCGCACCGG
CACCGACATGCGCCGGGCAGTCGGCGAATAA

Upstream 100 bases:

>100_bases
GACGTCGGAGGTGTGCCGTCCGCCCGCGACGGCATCGTGAACAGATCAGCCCGCACACGGGCCGAAAGGACGGACAGGTG
GGGACGGAGGTGATGACCTG

Downstream 100 bases:

>100_bases
CCCCAGCTCAGGCGGGCGATTCGGTATCCGGGCCGCCCGCCTGATACAGTGTCACAGCGCGGTTCCCCGGAACCGCACGG
GGCTATAGCGCAGTTGGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MPNSILWIGLVVLWVFVLFPILADRHPRIRQTTDAALATRVLHRGGSKRRLRYRPNRARRKRFHSDDAEDRMSTPADEKI
TDTDDDAVTGTSDEAGHGGTPSDSDIADSAPREPDSPDDDALRRARGERDGEIDADADDSADAEIAEKTQDGEKARVPAD
SDDEPTADEPGHGRTRAESSGEDGRAATDEDDTAEDATADDHAAPGHEDEPRPRRERVTARIPPARSAVPVRAPEPAAEY
DAQFDQAGEDRAGFDHAEDSADEDEPDFVPTRRGRGGYDPEADAIARAARYTFRQRAVLALLLTAIMSGALALILTPLFW
WACGLSVVVLATYLAYLRKQVRMEEEIRRRRAARLARRRGEPVPEQADDHEDDEDEHATARGGMDRATARALRRRSSLLD
VDDEDPLFEHLEAFEPAAARALRHRTGTDMRRAVGE

Sequences:

>Translated_436_residues
MPNSILWIGLVVLWVFVLFPILADRHPRIRQTTDAALATRVLHRGGSKRRLRYRPNRARRKRFHSDDAEDRMSTPADEKI
TDTDDDAVTGTSDEAGHGGTPSDSDIADSAPREPDSPDDDALRRARGERDGEIDADADDSADAEIAEKTQDGEKARVPAD
SDDEPTADEPGHGRTRAESSGEDGRAATDEDDTAEDATADDHAAPGHEDEPRPRRERVTARIPPARSAVPVRAPEPAAEY
DAQFDQAGEDRAGFDHAEDSADEDEPDFVPTRRGRGGYDPEADAIARAARYTFRQRAVLALLLTAIMSGALALILTPLFW
WACGLSVVVLATYLAYLRKQVRMEEEIRRRRAARLARRRGEPVPEQADDHEDDEDEHATARGGMDRATARALRRRSSLLD
VDDEDPLFEHLEAFEPAAARALRHRTGTDMRRAVGE
>Mature_435_residues
PNSILWIGLVVLWVFVLFPILADRHPRIRQTTDAALATRVLHRGGSKRRLRYRPNRARRKRFHSDDAEDRMSTPADEKIT
DTDDDAVTGTSDEAGHGGTPSDSDIADSAPREPDSPDDDALRRARGERDGEIDADADDSADAEIAEKTQDGEKARVPADS
DDEPTADEPGHGRTRAESSGEDGRAATDEDDTAEDATADDHAAPGHEDEPRPRRERVTARIPPARSAVPVRAPEPAAEYD
AQFDQAGEDRAGFDHAEDSADEDEPDFVPTRRGRGGYDPEADAIARAARYTFRQRAVLALLLTAIMSGALALILTPLFWW
ACGLSVVVLATYLAYLRKQVRMEEEIRRRRAARLARRRGEPVPEQADDHEDDEDEHATARGGMDRATARALRRRSSLLDV
DDEDPLFEHLEAFEPAAARALRHRTGTDMRRAVGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48239; Mature: 48108

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNSILWIGLVVLWVFVLFPILADRHPRIRQTTDAALATRVLHRGGSKRRLRYRPNRARR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
KRFHSDDAEDRMSTPADEKITDTDDDAVTGTSDEAGHGGTPSDSDIADSAPREPDSPDDD
HHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
ALRRARGERDGEIDADADDSADAEIAEKTQDGEKARVPADSDDEPTADEPGHGRTRAESS
HHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GEDGRAATDEDDTAEDATADDHAAPGHEDEPRPRRERVTARIPPARSAVPVRAPEPAAEY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHH
DAQFDQAGEDRAGFDHAEDSADEDEPDFVPTRRGRGGYDPEADAIARAARYTFRQRAVLA
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LLLTAIMSGALALILTPLFWWACGLSVVVLATYLAYLRKQVRMEEEIRRRRAARLARRRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EPVPEQADDHEDDEDEHATARGGMDRATARALRRRSSLLDVDDEDPLFEHLEAFEPAAAR
CCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHH
ALRHRTGTDMRRAVGE
HHHHHCCHHHHHHHCC
>Mature Secondary Structure 
PNSILWIGLVVLWVFVLFPILADRHPRIRQTTDAALATRVLHRGGSKRRLRYRPNRARR
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
KRFHSDDAEDRMSTPADEKITDTDDDAVTGTSDEAGHGGTPSDSDIADSAPREPDSPDDD
HHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
ALRRARGERDGEIDADADDSADAEIAEKTQDGEKARVPADSDDEPTADEPGHGRTRAESS
HHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GEDGRAATDEDDTAEDATADDHAAPGHEDEPRPRRERVTARIPPARSAVPVRAPEPAAEY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHH
DAQFDQAGEDRAGFDHAEDSADEDEPDFVPTRRGRGGYDPEADAIARAARYTFRQRAVLA
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LLLTAIMSGALALILTPLFWWACGLSVVVLATYLAYLRKQVRMEEEIRRRRAARLARRRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EPVPEQADDHEDDEDEHATARGGMDRATARALRRRSSLLDVDDEDPLFEHLEAFEPAAAR
CCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHH
ALRHRTGTDMRRAVGE
HHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA