| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is baiE [H]
Identifier: 54026870
GI number: 54026870
Start: 5110019
End: 5110549
Strand: Reverse
Name: baiE [H]
Synonym: nfa48960
Alternate gene names: 54026870
Gene position: 5110549-5110019 (Counterclockwise)
Preceding gene: 54026871
Following gene: 54026868
Centisome position: 84.88
GC content: 67.04
Gene sequence:
>531_bases ATGGACGATGTCACGGCCATCAACCGGCTCAAATTCCGTTACCTGCGCACCCTCGACACCAAATCCTGGGACGAGTTCGC CGACACGATGGTTCCCGAGGCCACCGCGACCTACAGCGAATACCTGCAATTCGAATCCCGGGAGGCATTTCTGGCCTTCC TGCGCAACACGCTCGGGCCGCACGTCATCACCGAGCACCGCTGCGATCACCCCGAGATCGATGTCGACGGCGACACCGCC ACCGGCACCTGGTACCTGGCCGACACCGTCCTCATCCCGGAGCACAACATGTTGCTGCGCGGCGCGGCCTACTACTCCGA CCGCTACGTGCGCTGCGACGACGGCCGGTGGCGGATCGCCCACACCGGCTACGAACGCACCTACGAGGTGGTGCTCTCGC TCAGCGACCTGCCCAGCCTGCGTCTGACCTCGAGCCGCTGGGGCCTCATCGCCCGCGAGGACGGCATCGCCTCCGTCGAA CGCGAACCCGGCGCCGCGGCCCAGGCCTACCGCGAACCCGACAGCGCCTGA
Upstream 100 bases:
>100_bases CGGCCGGGCCGATCCACTCGATCCTCGCGTGGTTTCCGACCTGTTCGCCCGTGGTAATCAAGGGGAGGCGAAGGGGTCGC GCGCGCGAGGGGGACCGGCC
Downstream 100 bases:
>100_bases CGGGCGACCAGGCGCGGTTCAGTCCGCGGCGGCGACCAGCGGGTCCAGGGTCAGGTTCGGGTGTTCCTTCTCGATGTACT GCAACCGCCACTTGTCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: BA7 alpha dehydratase; Bile acid-inducible operon protein E [H]
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MDDVTAINRLKFRYLRTLDTKSWDEFADTMVPEATATYSEYLQFESREAFLAFLRNTLGPHVITEHRCDHPEIDVDGDTA TGTWYLADTVLIPEHNMLLRGAAYYSDRYVRCDDGRWRIAHTGYERTYEVVLSLSDLPSLRLTSSRWGLIAREDGIASVE REPGAAAQAYREPDSA
Sequences:
>Translated_176_residues MDDVTAINRLKFRYLRTLDTKSWDEFADTMVPEATATYSEYLQFESREAFLAFLRNTLGPHVITEHRCDHPEIDVDGDTA TGTWYLADTVLIPEHNMLLRGAAYYSDRYVRCDDGRWRIAHTGYERTYEVVLSLSDLPSLRLTSSRWGLIAREDGIASVE REPGAAAQAYREPDSA >Mature_176_residues MDDVTAINRLKFRYLRTLDTKSWDEFADTMVPEATATYSEYLQFESREAFLAFLRNTLGPHVITEHRCDHPEIDVDGDTA TGTWYLADTVLIPEHNMLLRGAAYYSDRYVRCDDGRWRIAHTGYERTYEVVLSLSDLPSLRLTSSRWGLIAREDGIASVE REPGAAAQAYREPDSA
Specific function: Catalyzes the dehydratation of 7-alpha,12-alpha- dihydroxy-3-oxochol-4-enoate. The enzyme can also use 7-alpha- hydroxy-3-oxochol-4-enoate as a substrate but not 7-alpha,12- alpha-dihydroxy-3-oxochol-5-beta-anoate, 3-alpha,7-alpha,12-alpha- trihydroxychol
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =4.2.1.106 [H]
Molecular weight: Translated: 20131; Mature: 20131
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDVTAINRLKFRYLRTLDTKSWDEFADTMVPEATATYSEYLQFESREAFLAFLRNTLGP CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCC HVITEHRCDHPEIDVDGDTATGTWYLADTVLIPEHNMLLRGAAYYSDRYVRCDDGRWRIA CEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCEEEECCCCEEEE HTGYERTYEVVLSLSDLPSLRLTSSRWGLIAREDGIASVEREPGAAAQAYREPDSA ECCHHHEEHHEEECCCCCCEEECCCCCCEEECCCCCCCCCCCCCCHHHHHCCCCCC >Mature Secondary Structure MDDVTAINRLKFRYLRTLDTKSWDEFADTMVPEATATYSEYLQFESREAFLAFLRNTLGP CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCC HVITEHRCDHPEIDVDGDTATGTWYLADTVLIPEHNMLLRGAAYYSDRYVRCDDGRWRIA CEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCEEEECCCCEEEE HTGYERTYEVVLSLSDLPSLRLTSSRWGLIAREDGIASVEREPGAAAQAYREPDSA ECCHHHEEHHEEECCCCCCEEECCCCCCEEECCCCCCCCCCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254270 [H]