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The map label for this gene is 54026834

Identifier: 54026834

GI number: 54026834

Start: 5072216

End: 5072938

Strand: Reverse

Name: 54026834

Synonym: nfa48600

Alternate gene names: NA

Gene position: 5072938-5072216 (Counterclockwise)

Preceding gene: 54026840

Following gene: 54026833

Centisome position: 84.25

GC content: 73.72

Gene sequence:

>723_bases
TTGTCGAAGAGAACCGGCGTCCTGGCCGCCGCGCTGGTGACCCTGGTCGTCGCCGGGTGCGGTCTCGGACAGGACCTGCC
ACCCATTCCCGAGGGCATCCCGCCCGGCCCCGGGGCCCCGTTGCCCGTCATCGACGTGGACGCGCCCGGCCGCGCCGCCC
TGCAACTGCGCGACTGGGCCGAAACACAGTTTGGCACGCTCGGTATCCCCACCGTCGCACTCGAGGCCTACGGCTACGCG
GCCGCGGTGATGGCGCGCTCCCGGCCCGGCTGCGGCATCGCCTGGACCACGCTGGCGGGCATCGCCAGTGTGGAGAGCAA
GCACGGCACCCACCGCGAGTCCGATCTGCACGCCGACGGCGTGGTGCGCCCGCCCATCATCGGCGTGGCGCTGGACGGCT
CGCCGGGCGTGGCGGTCATCCGCGACACCGACGGCGGCGCGCTCGACGGCGACCCCGAGCACGACCGCGCGGTCGGACCG
TTGCAGTTCATTCCCGAGACCTGGCAGCGCTGGGGTGTCGACGCCAACGGCGACGGGGTGCTCGACCCGCAGAGCATCGA
CGACGCCGCGCTCACCGCCGCCCGGTACCTGTGCGCCAGCGGCGGCGACCTCACCTCCCGGGAGGGCTGGCAGCAGGCGC
TGCTCACCTACAACCAGTCGACCAGCTATCTCCACACCGTCCGGCACCGCGCGGCCGCCTACAGCGTGGGCCGGCGGGTG
TGA

Upstream 100 bases:

>100_bases
GCCGGTGAGAGCGCTTTTCGGGGGCGCAGGCGCGGGTCGCGTCGGCGGCGCGGCGCCGTCAAGCCGGGTTACGCGGCGGC
GTCTGGATGATGGAGTGGTG

Downstream 100 bases:

>100_bases
CAGGCCGCCCGGAGTGCCGGTTACCTCGGACGCGGCGGGGACGCTAGGCTCGGCACCGCACGGCCCAACCGTCAGACCCA
CCGTGCCAGCAGCCGAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane-Bound Lytic Murein Transglycosylase B-Like Protein; Membrane-Bound Lytic Murein Transglycosylase B; Lipoprotein LpqU; Lytic Transglycosylase Catalytic; NLP/P60-Family Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase B-Like; Transglycosylase; LOW QUALITY PROTEIN Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase; Cell Wall-Associated Hydrolase Invasion-Associated Protein; LpqU Protein; Membrane-Bound Lytic Murein Transglycosylase B Protein; NLP/P60 Protein

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSKRTGVLAAALVTLVVAGCGLGQDLPPIPEGIPPGPGAPLPVIDVDAPGRAALQLRDWAETQFGTLGIPTVALEAYGYA
AAVMARSRPGCGIAWTTLAGIASVESKHGTHRESDLHADGVVRPPIIGVALDGSPGVAVIRDTDGGALDGDPEHDRAVGP
LQFIPETWQRWGVDANGDGVLDPQSIDDAALTAARYLCASGGDLTSREGWQQALLTYNQSTSYLHTVRHRAAAYSVGRRV

Sequences:

>Translated_240_residues
MSKRTGVLAAALVTLVVAGCGLGQDLPPIPEGIPPGPGAPLPVIDVDAPGRAALQLRDWAETQFGTLGIPTVALEAYGYA
AAVMARSRPGCGIAWTTLAGIASVESKHGTHRESDLHADGVVRPPIIGVALDGSPGVAVIRDTDGGALDGDPEHDRAVGP
LQFIPETWQRWGVDANGDGVLDPQSIDDAALTAARYLCASGGDLTSREGWQQALLTYNQSTSYLHTVRHRAAAYSVGRRV
>Mature_239_residues
SKRTGVLAAALVTLVVAGCGLGQDLPPIPEGIPPGPGAPLPVIDVDAPGRAALQLRDWAETQFGTLGIPTVALEAYGYAA
AVMARSRPGCGIAWTTLAGIASVESKHGTHRESDLHADGVVRPPIIGVALDGSPGVAVIRDTDGGALDGDPEHDRAVGPL
QFIPETWQRWGVDANGDGVLDPQSIDDAALTAARYLCASGGDLTSREGWQQALLTYNQSTSYLHTVRHRAAAYSVGRRV

Specific function: Unknown

COG id: COG2951

COG function: function code M; Membrane-bound lytic murein transglycosylase B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24942; Mature: 24811

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRTGVLAAALVTLVVAGCGLGQDLPPIPEGIPPGPGAPLPVIDVDAPGRAALQLRDWA
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEHHHH
ETQFGTLGIPTVALEAYGYAAAVMARSRPGCGIAWTTLAGIASVESKHGTHRESDLHADG
HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
VVRPPIIGVALDGSPGVAVIRDTDGGALDGDPEHDRAVGPLQFIPETWQRWGVDANGDGV
CCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
LDPQSIDDAALTAARYLCASGGDLTSREGWQQALLTYNQSTSYLHTVRHRAAAYSVGRRV
CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKRTGVLAAALVTLVVAGCGLGQDLPPIPEGIPPGPGAPLPVIDVDAPGRAALQLRDWA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEHHHH
ETQFGTLGIPTVALEAYGYAAAVMARSRPGCGIAWTTLAGIASVESKHGTHRESDLHADG
HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
VVRPPIIGVALDGSPGVAVIRDTDGGALDGDPEHDRAVGPLQFIPETWQRWGVDANGDGV
CCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
LDPQSIDDAALTAARYLCASGGDLTSREGWQQALLTYNQSTSYLHTVRHRAAAYSVGRRV
CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA