Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026832

Identifier: 54026832

GI number: 54026832

Start: 5070113

End: 5070784

Strand: Reverse

Name: 54026832

Synonym: nfa48580

Alternate gene names: NA

Gene position: 5070784-5070113 (Counterclockwise)

Preceding gene: 54026833

Following gene: 54026831

Centisome position: 84.22

GC content: 76.04

Gene sequence:

>672_bases
ATGACGGAGCGACGCGCGCGCGGTACCAGTCCGGCAGGACGCGGTGACCGCCGCACGTCGCGCGCGGCCCGGTCGCGACC
GCGGGCGGGCGCCGACGCGGAAGCGGCCGCCCGGCCCGCCGCGGCCCGCCCGCGCAGGCGGGTCGAGTCCGGGGACAAGA
AGCGCGCCGAACCCCGCAAGATCGCGGCCCGCCGCGGCGAGGCCAAGGACAAGGCCGAGCGCACCGTGCTCGGCCTGTCC
ACCGGCAAGGCCGTCATCCTCGCGGTGGTGATCTGCGCGCTCGCGCTCACCCTGTCGGTGCCGATGCGCACCTACTTCAG
TCAGCGTGCCGAGGCGGCGCAGCTGGCTCAGGAGCGTCGCGAGCTCGAGGCCGATCTGGCCCGGCTGCGCGATCGCCGTG
CCCAGCAGGAGGATCCGGCGTTCATCCGGTCCGAGGCCAAGGACCGGCTGCGGTTGGTGATGCCCGGCGAGACGCCCTAC
ATCGTGCAGGTGCCCGGCATCGAGGCGCCGCCGCGCCCGTCCGGCCCGACCCAGTCCAGGACCCCGGATCCCTGGTACAC
CGACCTGTGGCGCACCATCGCCCAGCCGCCGCCCGCCGAACCGGCCACCCCGACGTCCGCCGTCCCCACGCCCACCGCAC
CGCCCCAGCCCGCACCGGAAGGACCACGGTGA

Upstream 100 bases:

>100_bases
CGCGCTCGGCGATTCCGCGCGGTACGCCGGCGACGTGGCGTTCCCGCGCTTCGTGTTCGACGGGTAAGGCTCGTGTTCGA
AGGGTGAGGCGAGGAGATCC

Downstream 100 bases:

>100_bases
GCGCACCGACCGACCGTGATCTCGAGATCGTCGCCGAACAACTCGGCCGTACCCCGCGCGGTGTGCTCGCCATCGCCTAC
CGCACGCCCGACGGCGTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MTERRARGTSPAGRGDRRTSRAARSRPRAGADAEAAARPAAARPRRRVESGDKKRAEPRKIAARRGEAKDKAERTVLGLS
TGKAVILAVVICALALTLSVPMRTYFSQRAEAAQLAQERRELEADLARLRDRRAQQEDPAFIRSEAKDRLRLVMPGETPY
IVQVPGIEAPPRPSGPTQSRTPDPWYTDLWRTIAQPPPAEPATPTSAVPTPTAPPQPAPEGPR

Sequences:

>Translated_223_residues
MTERRARGTSPAGRGDRRTSRAARSRPRAGADAEAAARPAAARPRRRVESGDKKRAEPRKIAARRGEAKDKAERTVLGLS
TGKAVILAVVICALALTLSVPMRTYFSQRAEAAQLAQERRELEADLARLRDRRAQQEDPAFIRSEAKDRLRLVMPGETPY
IVQVPGIEAPPRPSGPTQSRTPDPWYTDLWRTIAQPPPAEPATPTSAVPTPTAPPQPAPEGPR
>Mature_222_residues
TERRARGTSPAGRGDRRTSRAARSRPRAGADAEAAARPAAARPRRRVESGDKKRAEPRKIAARRGEAKDKAERTVLGLST
GKAVILAVVICALALTLSVPMRTYFSQRAEAAQLAQERRELEADLARLRDRRAQQEDPAFIRSEAKDRLRLVMPGETPYI
VQVPGIEAPPRPSGPTQSRTPDPWYTDLWRTIAQPPPAEPATPTSAVPTPTAPPQPAPEGPR

Specific function: Unknown

COG id: COG2919

COG function: function code D; Septum formation initiator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24340; Mature: 24209

Theoretical pI: Translated: 11.71; Mature: 11.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERRARGTSPAGRGDRRTSRAARSRPRAGADAEAAARPAAARPRRRVESGDKKRAEPRK
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCHHCHHHHHHCCCHHCCCHHH
IAARRGEAKDKAERTVLGLSTGKAVILAVVICALALTLSVPMRTYFSQRAEAAQLAQERR
HHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELEADLARLRDRRAQQEDPAFIRSEAKDRLRLVMPGETPYIVQVPGIEAPPRPSGPTQSR
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCC
TPDPWYTDLWRTIAQPPPAEPATPTSAVPTPTAPPQPAPEGPR
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TERRARGTSPAGRGDRRTSRAARSRPRAGADAEAAARPAAARPRRRVESGDKKRAEPRK
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCHHCHHHHHHCCCHHCCCHHH
IAARRGEAKDKAERTVLGLSTGKAVILAVVICALALTLSVPMRTYFSQRAEAAQLAQERR
HHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELEADLARLRDRRAQQEDPAFIRSEAKDRLRLVMPGETPYIVQVPGIEAPPRPSGPTQSR
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCC
TPDPWYTDLWRTIAQPPPAEPATPTSAVPTPTAPPQPAPEGPR
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA