| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is pimE [H]
Identifier: 54026736
GI number: 54026736
Start: 4973847
End: 4975091
Strand: Reverse
Name: pimE [H]
Synonym: nfa47620
Alternate gene names: 54026736
Gene position: 4975091-4973847 (Counterclockwise)
Preceding gene: 54026739
Following gene: 54026733
Centisome position: 82.63
GC content: 70.36
Gene sequence:
>1245_bases TTGAACCGAGAGAGCGCTCGGACGGACGCACGTCCGGCCGCTGCCCCCCTGCGAACGGCGCTGGCGTTGCTCGGCCTCTC GGTGCTGGCCCGGATGCTGTGGATGCTGTTGTCCGACAACGGGATGAATCTGGTCGACCTGCACGTCTACGTGGACGGCT CGGCCTCGGTGCTCACCGACCGGCTCTACGACTTCACCTATGCGGAGAAGACACCCGACTTCCCGCTGCCCTTCACGTAT CCGCCGTTCGCCGCGCTGGTGTTCTCGCCGCTGCATTTCCTGCCCTTCACCGTCATCGCGGTCGGCTGGCTGCTGGCCAC GGTGGCCGCGCTGTACGGGGTGGTGCGGATCTCACTGGAGTTGCTGCTCGGTCGCGAGCGGTTGCGCGAGCCGGGCTGGC GCACCGCGACGGTGGCCTGGACGGCGGTCGGGGTGTGGCTGGAGCCGGTGCGCACCACCCTGGACTACGGGCAGGTGAAC GTCTTCCTGGTGCTCGGGGCGATGCTCGCGGTGCGCAACTCGCGCTGGTGGGTCTCCGGTGGGCTCGTCGGGCTGATCGC CGGTATCAAGCTGACACCGGCGATCACGGGGCTGTACTTCGTGGCGCGCAGGCGCTGGGGCGCCGCGGTGTTCTCCGCGG TGGCCTTCGGCGGCACCGTGGCGATCAGCTATCTGCTCAACAATCACGAGGCCACCCGCTACTTCGGCACCCTGCTCGGC GACGCGGACCGCATCGGACCGGTGGCCTCGGTGTGGAATCAGTCGCTGCGCGGGACGCTGAGCCGGATCCTCGGCTACGA CGTGGAGACCGGGCCGATCTGGATCGCGGCGGTGCTGCTGGTCGCGGTGCCTGCGTTCTTCGCGTGGCGGGCGCTCGGCC CCGACGACCTGCTCGGCACGCTGCTCGTGGTGCAGTTGTTCGGGCTGCTGGTCTCGCCGATCTCGTGGTCGCACCACTGG GTGTGGTTGCTGCCGCTGGTGCTGTGGCTGGTGTACGGGCCACTGCGGCAGGCGCCGGGCGCGCGGGTGCTGGCCGGTTA CTGGCTGCTGACCATGCTGGTGGGCGTGCCGTGGGTGCTGTCGTTCTTCCAGCCGACGATCTGGGAGATCTCCCGGCCCG GCCTGCTGTCCTGGCTGGGTGCGGTGGACGTGCTCGGCGTGCTGGCCTGCTACGTCTGGGTGATCGTGGCGGGCAGGCGC GCGCGGGCCACCGCGCCCGAGCCGGAGCGGGCCGGGCTGCGCTGA
Upstream 100 bases:
>100_bases CGGTTAATCTAGTCATCACCTTCGGCTCGCGTGCGCCGAACACTCCGAAACACCCCCGGCCGCGCCGGCGACCCGCACAC CACCTCCGAAAGCCTGCGAT
Downstream 100 bases:
>100_bases CTAGCGCGCGAGTTCGTCGATCTGCCGGGCGAGATCGATGTCGCGGCCGGTGAGTCCGCCGGCGGAATGGGTGGACAAGG TGAAGGTGACGGTGCGCCAG
Product: mannosyltransferase
Products: NA
Alternate protein names: Alpha-mannosyltransferase; Alpha-manT; PPM-dependent mannosyltransferase; Polyprenol-phosphate-mannose alpha-mannosyltransferase; PPM alpha-mannosyltransferase [H]
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MNRESARTDARPAAAPLRTALALLGLSVLARMLWMLLSDNGMNLVDLHVYVDGSASVLTDRLYDFTYAEKTPDFPLPFTY PPFAALVFSPLHFLPFTVIAVGWLLATVAALYGVVRISLELLLGRERLREPGWRTATVAWTAVGVWLEPVRTTLDYGQVN VFLVLGAMLAVRNSRWWVSGGLVGLIAGIKLTPAITGLYFVARRRWGAAVFSAVAFGGTVAISYLLNNHEATRYFGTLLG DADRIGPVASVWNQSLRGTLSRILGYDVETGPIWIAAVLLVAVPAFFAWRALGPDDLLGTLLVVQLFGLLVSPISWSHHW VWLLPLVLWLVYGPLRQAPGARVLAGYWLLTMLVGVPWVLSFFQPTIWEISRPGLLSWLGAVDVLGVLACYVWVIVAGRR ARATAPEPERAGLR
Sequences:
>Translated_414_residues MNRESARTDARPAAAPLRTALALLGLSVLARMLWMLLSDNGMNLVDLHVYVDGSASVLTDRLYDFTYAEKTPDFPLPFTY PPFAALVFSPLHFLPFTVIAVGWLLATVAALYGVVRISLELLLGRERLREPGWRTATVAWTAVGVWLEPVRTTLDYGQVN VFLVLGAMLAVRNSRWWVSGGLVGLIAGIKLTPAITGLYFVARRRWGAAVFSAVAFGGTVAISYLLNNHEATRYFGTLLG DADRIGPVASVWNQSLRGTLSRILGYDVETGPIWIAAVLLVAVPAFFAWRALGPDDLLGTLLVVQLFGLLVSPISWSHHW VWLLPLVLWLVYGPLRQAPGARVLAGYWLLTMLVGVPWVLSFFQPTIWEISRPGLLSWLGAVDVLGVLACYVWVIVAGRR ARATAPEPERAGLR >Mature_414_residues MNRESARTDARPAAAPLRTALALLGLSVLARMLWMLLSDNGMNLVDLHVYVDGSASVLTDRLYDFTYAEKTPDFPLPFTY PPFAALVFSPLHFLPFTVIAVGWLLATVAALYGVVRISLELLLGRERLREPGWRTATVAWTAVGVWLEPVRTTLDYGQVN VFLVLGAMLAVRNSRWWVSGGLVGLIAGIKLTPAITGLYFVARRRWGAAVFSAVAFGGTVAISYLLNNHEATRYFGTLLG DADRIGPVASVWNQSLRGTLSRILGYDVETGPIWIAAVLLVAVPAFFAWRALGPDDLLGTLLVVQLFGLLVSPISWSHHW VWLLPLVLWLVYGPLRQAPGARVLAGYWLLTMLVGVPWVLSFFQPTIWEISRPGLLSWLGAVDVLGVLACYVWVIVAGRR ARATAPEPERAGLR
Specific function: Catalyzes the alpha-1,2 addition of a mannose residue from polyprenol-phosphate-mannose (PPM) to a monoacyl phosphatidylinositol pentamannoside (AcPIM5) to generate a monoacyl phosphatidylinositol hexamannoside (AcPIM6) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PIGM family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018584 [H]
Pfam domain/function: PF09594 DUF2029 [H]
EC number: NA
Molecular weight: Translated: 45469; Mature: 45469
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRESARTDARPAAAPLRTALALLGLSVLARMLWMLLSDNGMNLVDLHVYVDGSASVLTD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHH RLYDFTYAEKTPDFPLPFTYPPFAALVFSPLHFLPFTVIAVGWLLATVAALYGVVRISLE HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLGRERLREPGWRTATVAWTAVGVWLEPVRTTLDYGQVNVFLVLGAMLAVRNSRWWVSG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEECC GLVGLIAGIKLTPAITGLYFVARRRWGAAVFSAVAFGGTVAISYLLNNHEATRYFGTLLG CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC DADRIGPVASVWNQSLRGTLSRILGYDVETGPIWIAAVLLVAVPAFFAWRALGPDDLLGT CCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LLVVQLFGLLVSPISWSHHWVWLLPLVLWLVYGPLRQAPGARVLAGYWLLTMLVGVPWVL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SFFQPTIWEISRPGLLSWLGAVDVLGVLACYVWVIVAGRRARATAPEPERAGLR HHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNRESARTDARPAAAPLRTALALLGLSVLARMLWMLLSDNGMNLVDLHVYVDGSASVLTD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHH RLYDFTYAEKTPDFPLPFTYPPFAALVFSPLHFLPFTVIAVGWLLATVAALYGVVRISLE HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLGRERLREPGWRTATVAWTAVGVWLEPVRTTLDYGQVNVFLVLGAMLAVRNSRWWVSG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEECC GLVGLIAGIKLTPAITGLYFVARRRWGAAVFSAVAFGGTVAISYLLNNHEATRYFGTLLG CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC DADRIGPVASVWNQSLRGTLSRILGYDVETGPIWIAAVLLVAVPAFFAWRALGPDDLLGT CCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LLVVQLFGLLVSPISWSHHWVWLLPLVLWLVYGPLRQAPGARVLAGYWLLTMLVGVPWVL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SFFQPTIWEISRPGLLSWLGAVDVLGVLACYVWVIVAGRRARATAPEPERAGLR HHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]