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The map label for this gene is yafV [C]

Identifier: 54026655

GI number: 54026655

Start: 4882342

End: 4883196

Strand: Reverse

Name: yafV [C]

Synonym: nfa46820

Alternate gene names: 54026655

Gene position: 4883196-4882342 (Counterclockwise)

Preceding gene: 54026658

Following gene: 54026654

Centisome position: 81.1

GC content: 72.87

Gene sequence:

>855_bases
ATGCAACTCGAGCACGGTGCGCAGAAACGGGACCGGCGCGAGCCGGCGGTGGAGATCGCGGTCGTCCAGTTCACCCCGGG
CGTCGAGCCCGCGGCGAACCTTGCGACGCTGCGCGAGCACGTCGAGGAGGCCGCGCGCCACGGCGCCCGCGTGGTGATCG
CCCCGGAGTACGCGATGTACGCGGTGCGCAAGCTCGACGAGCGGGTGGTGGCCGTCGCCCAGCCGCTGGACGGGCCGTTC
GCCACCGGACTGGCCGACCTCGCCCGCAATGCCGGGGTGTACCTGGTGGCGGGCATGGTGGAGACCGGCCAGCCGGGCGA
GGAGCGCATCCGCAACACCCTCGTGGTGACCGGTCCGGCGGGCGAGCGGATCGCGATCTACCGGAAGGTGCACCTCTACG
ACGCGTTCGGGCATCGCGAGTCCGACGTCATCGAAGCGGGCCCGATCATCGAGCCCGCGCTGTTCACCGTCGACGGTGTC
ACCATCGGCTTGCAGACCTGTTTCGATCTGCGGTTCCCGGAGGGTTTCCGGCGCATCGCCGCGGCGGGTGCGCACGTGCT
GGCCGTGCCCGCGCAGTGGATTCCCGGACCGGCCAAGGTCGACCAGTGGACCACGCTGCTGCGGGCAAGGGCGATCGAGA
ACACCGTCTACGTCGCCGCCGCCGACCAGGCCGCCCCGCTCGGCTCGGGCGCGTCGATGATCGTCGACCCGGCGGGCGCG
GTGCTCGCCGAACTCGGCGACGCGCCGGGGGTGCTCACCGCCACCGTCGACCTGGAGCACCTGGCCGCGGTGCGCACCCG
CAACCCGAGCCTGGCGCTGCGCCGATTCGCGGTCACCGCGCGCGCAGCGGAGTAG

Upstream 100 bases:

>100_bases
TCGTCGCCAGGAACGCTGTCGACCTGATTGGTGCTCATTGACCAGGAGTTTACTGCCTGCCGGTGGCCTCCCGGGTCACC
GGGCCAATACGGTGAGACCT

Downstream 100 bases:

>100_bases
CGTTCGAGGGGAGATGAGCTACGCCGATCGCACCGCGGCCGGTCGGGTGCTGGCCGCCGAACTCGAGCACCTGCGCGAGG
CGGTCCCGCTGGTGCTCGGG

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MQLEHGAQKRDRREPAVEIAVVQFTPGVEPAANLATLREHVEEAARHGARVVIAPEYAMYAVRKLDERVVAVAQPLDGPF
ATGLADLARNAGVYLVAGMVETGQPGEERIRNTLVVTGPAGERIAIYRKVHLYDAFGHRESDVIEAGPIIEPALFTVDGV
TIGLQTCFDLRFPEGFRRIAAAGAHVLAVPAQWIPGPAKVDQWTTLLRARAIENTVYVAAADQAAPLGSGASMIVDPAGA
VLAELGDAPGVLTATVDLEHLAAVRTRNPSLALRRFAVTARAAE

Sequences:

>Translated_284_residues
MQLEHGAQKRDRREPAVEIAVVQFTPGVEPAANLATLREHVEEAARHGARVVIAPEYAMYAVRKLDERVVAVAQPLDGPF
ATGLADLARNAGVYLVAGMVETGQPGEERIRNTLVVTGPAGERIAIYRKVHLYDAFGHRESDVIEAGPIIEPALFTVDGV
TIGLQTCFDLRFPEGFRRIAAAGAHVLAVPAQWIPGPAKVDQWTTLLRARAIENTVYVAAADQAAPLGSGASMIVDPAGA
VLAELGDAPGVLTATVDLEHLAAVRTRNPSLALRRFAVTARAAE
>Mature_284_residues
MQLEHGAQKRDRREPAVEIAVVQFTPGVEPAANLATLREHVEEAARHGARVVIAPEYAMYAVRKLDERVVAVAQPLDGPF
ATGLADLARNAGVYLVAGMVETGQPGEERIRNTLVVTGPAGERIAIYRKVHLYDAFGHRESDVIEAGPIIEPALFTVDGV
TIGLQTCFDLRFPEGFRRIAAAGAHVLAVPAQWIPGPAKVDQWTTLLRARAIENTVYVAAADQAAPLGSGASMIVDPAGA
VLAELGDAPGVLTATVDLEHLAAVRTRNPSLALRRFAVTARAAE

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI297632348, Length=272, Percent_Identity=37.1323529411765, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI297632350, Length=272, Percent_Identity=37.1323529411765, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI5031947, Length=272, Percent_Identity=37.1323529411765, Blast_Score=136, Evalue=2e-32,
Organism=Homo sapiens, GI9910460, Length=274, Percent_Identity=29.5620437956204, Blast_Score=117, Evalue=9e-27,
Organism=Homo sapiens, GI297632346, Length=190, Percent_Identity=35.7894736842105, Blast_Score=88, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17556280, Length=268, Percent_Identity=30.2238805970149, Blast_Score=107, Evalue=7e-24,
Organism=Saccharomyces cerevisiae, GI6323383, Length=287, Percent_Identity=29.9651567944251, Blast_Score=101, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6322335, Length=297, Percent_Identity=25.9259259259259, Blast_Score=90, Evalue=5e-19,
Organism=Drosophila melanogaster, GI17933642, Length=284, Percent_Identity=32.3943661971831, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI21355835, Length=280, Percent_Identity=29.2857142857143, Blast_Score=105, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 30239; Mature: 30239

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS50263 CN_HYDROLASE ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLEHGAQKRDRREPAVEIAVVQFTPGVEPAANLATLREHVEEAARHGARVVIAPEYAMY
CCCCCCCHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHH
AVRKLDERVVAVAQPLDGPFATGLADLARNAGVYLVAGMVETGQPGEERIRNTLVVTGPA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHCCEEEEECCC
GERIAIYRKVHLYDAFGHRESDVIEAGPIIEPALFTVDGVTIGLQTCFDLRFPEGFRRIA
CCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEEHHHHHCCCCCHHHHHHH
AAGAHVLAVPAQWIPGPAKVDQWTTLLRARAIENTVYVAAADQAAPLGSGASMIVDPAGA
HCCCEEEEECHHHCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECCHHH
VLAELGDAPGVLTATVDLEHLAAVRTRNPSLALRRFAVTARAAE
HHHHCCCCCCEEEEEECHHHHHHHHCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQLEHGAQKRDRREPAVEIAVVQFTPGVEPAANLATLREHVEEAARHGARVVIAPEYAMY
CCCCCCCHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHH
AVRKLDERVVAVAQPLDGPFATGLADLARNAGVYLVAGMVETGQPGEERIRNTLVVTGPA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHCCEEEEECCC
GERIAIYRKVHLYDAFGHRESDVIEAGPIIEPALFTVDGVTIGLQTCFDLRFPEGFRRIA
CCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEEHHHHHCCCCCHHHHHHH
AAGAHVLAVPAQWIPGPAKVDQWTTLLRARAIENTVYVAAADQAAPLGSGASMIVDPAGA
HCCCEEEEECHHHCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECCHHH
VLAELGDAPGVLTATVDLEHLAAVRTRNPSLALRRFAVTARAAE
HHHHCCCCCCEEEEEECHHHHHHHHCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]