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The map label for this gene is cofD [H]

Identifier: 54026594

GI number: 54026594

Start: 4808259

End: 4809317

Strand: Reverse

Name: cofD [H]

Synonym: nfa46210

Alternate gene names: 54026594

Gene position: 4809317-4808259 (Counterclockwise)

Preceding gene: 54026602

Following gene: 54026593

Centisome position: 79.87

GC content: 67.04

Gene sequence:

>1059_bases
ATGAGCAGCAAATATGCTGCCGCGGGAGCGCCGCCGCGCCAACGCATAGGCTGTGCGGATGTGACTGGACAACACGCGGA
CATCGCGCCCGCAACGGGCCCCCGGATCGTCGTGCTCGTCGGCGGCGTCGGCGGCGCGCGCTTCCTGCAGGGCGTGCGAG
AACTGCTGCCCGACGCCGAGGTCTCGGCGATCGTGAACGTCGGAGACGACGTCTGGATGCACGGCCTCCGAATCTGTCCC
GACCTGGATACCTGCATGTATACCCTCGGTGGCGGCATCGATACCGAGCGCGGCTGGGGCCGGGTCGGCGAGACCTGGCA
CGCCAAGGAGGAGCTCGCCGCATACCACGCCAAGCCGGACTGGTTCGGGTTGGGGGACCGCGATCTCGCCACCCACCTCA
TTCGCACGGAAATGTTGCGAGCGGGTTACCCCCTGTCGGCCGTGACCGAAGCACTGTGCAACCGCTGGCAACCTGGCGTG
AAACTGATCCCGGCAACCGACGACAGGTGTGAAACGCATGTTGTTGTGACTGATCCGGAGAACCCTGGCGAACGCCGCGC
GATCCATTTTCAGGAGTGGTGGGTGCGGTACCGCGCAAACGTCGAAACTCATGGATTCGCCACAATCGGAGCGGATGAAG
CAAAACCTGCGCCGAATGTGATCGATCTCATAGAGTCCGCCGATGCGGTGTTGCTGGCCCCCTCGAACCCCGTGGTCAGC
ATCGGCGCGATCCTCGCCGTGCCCGGCATCAGGGGCGCGCTGCGGACCACCCGGGCGAAGGTGATCGGCGTGTCCGGCGT
GATCGACGGAAAGCCGTTGCGCGGCATGGCCGACGAGTGCCTGTCCGTGATCGGAGTCGAGACCACCGCCGAGGCGGTCG
GCAGGCACTACGGCGCGCGCTCGGCCACCGGCATCCTGGACGGCTGGCTGATCCACACCACCGACACCGCCGAGGTGCCC
GGCGTCGAGGTGCGCAGCGTGCCGCTGCTCATGACCGACCCGCCGACCACCGCCGAAATCGTCCGGGAGGCCCTGGATCT
CGCGGGGGTGAAGTGGTGA

Upstream 100 bases:

>100_bases
TGATTAGACACGCCGGATGTATCGATGGTCAAGCCGCCGTCGCTATTCCGTTACTATCCGGGACCGTTTTCTGCGTGGCG
CTGGAGACGCAGAATAGCAA

Downstream 100 bases:

>100_bases
GCGCGCCCGGCGACCACGCGGGCGTGAGTCGCGAGGGGTTGCGGATCCTGCCCGTCACCGGCCTCCCCGAGTTCCGTCCC
GGCGACGACGTGGCCGAGCG

Product: LPPG:FO 2-phospho-L-lactate transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MSSKYAAAGAPPRQRIGCADVTGQHADIAPATGPRIVVLVGGVGGARFLQGVRELLPDAEVSAIVNVGDDVWMHGLRICP
DLDTCMYTLGGGIDTERGWGRVGETWHAKEELAAYHAKPDWFGLGDRDLATHLIRTEMLRAGYPLSAVTEALCNRWQPGV
KLIPATDDRCETHVVVTDPENPGERRAIHFQEWWVRYRANVETHGFATIGADEAKPAPNVIDLIESADAVLLAPSNPVVS
IGAILAVPGIRGALRTTRAKVIGVSGVIDGKPLRGMADECLSVIGVETTAEAVGRHYGARSATGILDGWLIHTTDTAEVP
GVEVRSVPLLMTDPPTTAEIVREALDLAGVKW

Sequences:

>Translated_352_residues
MSSKYAAAGAPPRQRIGCADVTGQHADIAPATGPRIVVLVGGVGGARFLQGVRELLPDAEVSAIVNVGDDVWMHGLRICP
DLDTCMYTLGGGIDTERGWGRVGETWHAKEELAAYHAKPDWFGLGDRDLATHLIRTEMLRAGYPLSAVTEALCNRWQPGV
KLIPATDDRCETHVVVTDPENPGERRAIHFQEWWVRYRANVETHGFATIGADEAKPAPNVIDLIESADAVLLAPSNPVVS
IGAILAVPGIRGALRTTRAKVIGVSGVIDGKPLRGMADECLSVIGVETTAEAVGRHYGARSATGILDGWLIHTTDTAEVP
GVEVRSVPLLMTDPPTTAEIVREALDLAGVKW
>Mature_351_residues
SSKYAAAGAPPRQRIGCADVTGQHADIAPATGPRIVVLVGGVGGARFLQGVRELLPDAEVSAIVNVGDDVWMHGLRICPD
LDTCMYTLGGGIDTERGWGRVGETWHAKEELAAYHAKPDWFGLGDRDLATHLIRTEMLRAGYPLSAVTEALCNRWQPGVK
LIPATDDRCETHVVVTDPENPGERRAIHFQEWWVRYRANVETHGFATIGADEAKPAPNVIDLIESADAVLLAPSNPVVSI
GAILAVPGIRGALRTTRAKVIGVSGVIDGKPLRGMADECLSVIGVETTAEAVGRHYGARSATGILDGWLIHTTDTAEVPG
VEVRSVPLLMTDPPTTAEIVREALDLAGVKW

Specific function: Catalyzes the transfer of the 2-phospholactate moiety from lactyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl- 8-hydroxy-5-deazariboflavin (FO) with the formation of the L- lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5- deazariboflavin (F42

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CofD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010115 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 37572; Mature: 37441

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKYAAAGAPPRQRIGCADVTGQHADIAPATGPRIVVLVGGVGGARFLQGVRELLPDAE
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCC
VSAIVNVGDDVWMHGLRICPDLDTCMYTLGGGIDTERGWGRVGETWHAKEELAAYHAKPD
CHHEEECCCHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
WFGLGDRDLATHLIRTEMLRAGYPLSAVTEALCNRWQPGVKLIPATDDRCETHVVVTDPE
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCC
NPGERRAIHFQEWWVRYRANVETHGFATIGADEAKPAPNVIDLIESADAVLLAPSNPVVS
CCCCCCEEEHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHCCCCEEEECCCCCCEE
IGAILAVPGIRGALRTTRAKVIGVSGVIDGKPLRGMADECLSVIGVETTAEAVGRHYGAR
HHHHHHCCCCHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCC
SATGILDGWLIHTTDTAEVPGVEVRSVPLLMTDPPTTAEIVREALDLAGVKW
CCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSKYAAAGAPPRQRIGCADVTGQHADIAPATGPRIVVLVGGVGGARFLQGVRELLPDAE
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCC
VSAIVNVGDDVWMHGLRICPDLDTCMYTLGGGIDTERGWGRVGETWHAKEELAAYHAKPD
CHHEEECCCHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
WFGLGDRDLATHLIRTEMLRAGYPLSAVTEALCNRWQPGVKLIPATDDRCETHVVVTDPE
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCC
NPGERRAIHFQEWWVRYRANVETHGFATIGADEAKPAPNVIDLIESADAVLLAPSNPVVS
CCCCCCEEEHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHCCCCEEEECCCCCCEE
IGAILAVPGIRGALRTTRAKVIGVSGVIDGKPLRGMADECLSVIGVETTAEAVGRHYGAR
HHHHHHCCCCHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCC
SATGILDGWLIHTTDTAEVPGVEVRSVPLLMTDPPTTAEIVREALDLAGVKW
CCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA