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The map label for this gene is pdtaS [H]

Identifier: 54026554

GI number: 54026554

Start: 4764553

End: 4766067

Strand: Reverse

Name: pdtaS [H]

Synonym: nfa45810

Alternate gene names: 54026554

Gene position: 4766067-4764553 (Counterclockwise)

Preceding gene: 54026555

Following gene: 54026551

Centisome position: 79.15

GC content: 71.55

Gene sequence:

>1515_bases
GTGGCGACACTGAGCGAACTCCTCGCCGAGCACACCGACCTACCCGGCCTGGCCGTGGACCACCTGCAACGGGTGGTGGG
CGACTGGCAGCTGCTCGCGGACCTGTCCTTCGCCGATCTGCTGCTGTGGGTCGGTGCGGGACCGGTGGAGGACGGCGCGG
ACATCGTCTGCGTCGCCCAGTGCCGCCCGACCACCGCCGCGACCGTGCACGTCGAGGACATGGTGGGCACCGTGGCCTCG
CGCGCGGACCATCCGCAGGTGTTCGAGGCACTGCTCACCGGCAAGGTGGTGCGCGCCGACAGCGCGGGGGAGGCGACCGG
GGTCTACCACCCGCACCCGGTGCACGCGGTGCGCGAGGCGGTGCCGGTGCGGTGCGGCGACAACGTGATCGCGGTGCTCT
CCCGCGACACCGACATGCAGCGGTCCCGGGTGCGCAGCACGCTGGAGATCGCCTACGTCGCCTGCGCCGACGACCTGTGC
CAGATGATCGCCGAGGGCACCTTCCCCACGCCGGAGGACCGGGCGGCGACCCATTCCAGCCCGCGCGCGGGGGACGGTTT
CATCCGGCTGGACACCGAGGGCATCGTCGTCTACGCCAGCCCGAACGCGCTGTCGGCCTATCACCGGATGGGGCTGCAGA
GCGATCTGGCCGGGCAGGATCTGGCCGAGACCACCCGCTCGCTCATCACCGATCCCTTCGACGCCCAGGAAGTGGTCGGC
GACATCCAGGCCGCGCTGGCCGGGCGGACCGGGCGCCGCATGGAGGTGGAGGCGCGCGGGGCGACCGTGCTGCTGCGCAC
CCTGGTGCTGCGCCCGCACGGCAAGCTGGCCGGCGCCGCCGTGCTGGTCCGTGACGTCACCGAGGTGAAGCGGCGCGACC
GGGCACTGCTGTCGAAGGACGCGACGATCCGCGAGATCCACCACCGGGTCAAGAACAATCTGCAGACGGTCGCCGCGCTG
CTGCGGCTACAGGCCAGGCGCACCGAGAACGAGGAGGCCCAGGTCGCGCTCACCGAGTCGGTGCGCCGGGTGACCTCGAT
CGCGTCGGTGCACGAGATGCTGTCGATGTCGGTGGACGAGGAGGTCGATCTCGACGAGGTCGTCGACCGGCTGCTGCCGA
TCATGGCCGATGTCGCCACCGTGCACACCACCCGCATCAAGGTGCGCCGCGCGGGTTCACTGGGCGTCTTCTCCGCCGAG
CGGGCGACCCCGCTGGTCATGGTGCTCACCGAACTGGTGCAGAACGCGATCGAGCACGCCTTCGACTCCGGTCAGACCGG
TACCGTGACGATTCGCTCGGAGCGGTCGGCCCGCTGGCTGGACGTGATCATCAGCGACGACGGGCGTGGCCTGCCGCCGG
GCTTCAGCCTGGAGGCCTCCGACCGCCTTGGCCTGCAGATCGTGCGCACGCTGGTCACCGCGGAACTGGGCGGTTCCATC
GGCCTGCACCCGGGTGCCGATGTCGGCACCGACGCGGTCCTGCGGGTCCCCCTCGGCCGCCGATCGGGCCGCTAG

Upstream 100 bases:

>100_bases
CGGCGGCGAGGTCACCGCCGTCGAGGTCGAGCCCGGCCAGGTGCTGCAAGCGGGCGACCTGATCGCCGTCATCTCCTAGC
ACGCCGGGCGGTAGACCCAC

Downstream 100 bases:

>100_bases
AAACGGGCCCTGACATACAACAGCCCGGCACTTCGTACGCGAGTGCCGGGCTCTATCGCGCTACCGGGCCTCCACCACCG
GCCCGGTAGCTCGTGTCGTC

Product: putative two-component system sensor kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MATLSELLAEHTDLPGLAVDHLQRVVGDWQLLADLSFADLLLWVGAGPVEDGADIVCVAQCRPTTAATVHVEDMVGTVAS
RADHPQVFEALLTGKVVRADSAGEATGVYHPHPVHAVREAVPVRCGDNVIAVLSRDTDMQRSRVRSTLEIAYVACADDLC
QMIAEGTFPTPEDRAATHSSPRAGDGFIRLDTEGIVVYASPNALSAYHRMGLQSDLAGQDLAETTRSLITDPFDAQEVVG
DIQAALAGRTGRRMEVEARGATVLLRTLVLRPHGKLAGAAVLVRDVTEVKRRDRALLSKDATIREIHHRVKNNLQTVAAL
LRLQARRTENEEAQVALTESVRRVTSIASVHEMLSMSVDEEVDLDEVVDRLLPIMADVATVHTTRIKVRRAGSLGVFSAE
RATPLVMVLTELVQNAIEHAFDSGQTGTVTIRSERSARWLDVIISDDGRGLPPGFSLEASDRLGLQIVRTLVTAELGGSI
GLHPGADVGTDAVLRVPLGRRSGR

Sequences:

>Translated_504_residues
MATLSELLAEHTDLPGLAVDHLQRVVGDWQLLADLSFADLLLWVGAGPVEDGADIVCVAQCRPTTAATVHVEDMVGTVAS
RADHPQVFEALLTGKVVRADSAGEATGVYHPHPVHAVREAVPVRCGDNVIAVLSRDTDMQRSRVRSTLEIAYVACADDLC
QMIAEGTFPTPEDRAATHSSPRAGDGFIRLDTEGIVVYASPNALSAYHRMGLQSDLAGQDLAETTRSLITDPFDAQEVVG
DIQAALAGRTGRRMEVEARGATVLLRTLVLRPHGKLAGAAVLVRDVTEVKRRDRALLSKDATIREIHHRVKNNLQTVAAL
LRLQARRTENEEAQVALTESVRRVTSIASVHEMLSMSVDEEVDLDEVVDRLLPIMADVATVHTTRIKVRRAGSLGVFSAE
RATPLVMVLTELVQNAIEHAFDSGQTGTVTIRSERSARWLDVIISDDGRGLPPGFSLEASDRLGLQIVRTLVTAELGGSI
GLHPGADVGTDAVLRVPLGRRSGR
>Mature_503_residues
ATLSELLAEHTDLPGLAVDHLQRVVGDWQLLADLSFADLLLWVGAGPVEDGADIVCVAQCRPTTAATVHVEDMVGTVASR
ADHPQVFEALLTGKVVRADSAGEATGVYHPHPVHAVREAVPVRCGDNVIAVLSRDTDMQRSRVRSTLEIAYVACADDLCQ
MIAEGTFPTPEDRAATHSSPRAGDGFIRLDTEGIVVYASPNALSAYHRMGLQSDLAGQDLAETTRSLITDPFDAQEVVGD
IQAALAGRTGRRMEVEARGATVLLRTLVLRPHGKLAGAAVLVRDVTEVKRRDRALLSKDATIREIHHRVKNNLQTVAALL
RLQARRTENEEAQVALTESVRRVTSIASVHEMLSMSVDEEVDLDEVVDRLLPIMADVATVHTTRIKVRRAGSLGVFSAER
ATPLVMVLTELVQNAIEHAFDSGQTGTVTIRSERSARWLDVIISDDGRGLPPGFSLEASDRLGLQIVRTLVTAELGGSIG
LHPGADVGTDAVLRVPLGRRSGR

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 54260; Mature: 54129

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLSELLAEHTDLPGLAVDHLQRVVGDWQLLADLSFADLLLWVGAGPVEDGADIVCVAQ
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEE
CRPTTAATVHVEDMVGTVASRADHPQVFEALLTGKVVRADSAGEATGVYHPHPVHAVREA
CCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHH
VPVRCGDNVIAVLSRDTDMQRSRVRSTLEIAYVACADDLCQMIAEGTFPTPEDRAATHSS
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PRAGDGFIRLDTEGIVVYASPNALSAYHRMGLQSDLAGQDLAETTRSLITDPFDAQEVVG
CCCCCCEEEEECCCEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
DIQAALAGRTGRRMEVEARGATVLLRTLVLRPHGKLAGAAVLVRDVTEVKRRDRALLSKD
HHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ATIREIHHRVKNNLQTVAALLRLQARRTENEEAQVALTESVRRVTSIASVHEMLSMSVDE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EVDLDEVVDRLLPIMADVATVHTTRIKVRRAGSLGVFSAERATPLVMVLTELVQNAIEHA
CCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHH
FDSGQTGTVTIRSERSARWLDVIISDDGRGLPPGFSLEASDRLGLQIVRTLVTAELGGSI
HCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
GLHPGADVGTDAVLRVPLGRRSGR
CCCCCCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure 
ATLSELLAEHTDLPGLAVDHLQRVVGDWQLLADLSFADLLLWVGAGPVEDGADIVCVAQ
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEE
CRPTTAATVHVEDMVGTVASRADHPQVFEALLTGKVVRADSAGEATGVYHPHPVHAVREA
CCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHH
VPVRCGDNVIAVLSRDTDMQRSRVRSTLEIAYVACADDLCQMIAEGTFPTPEDRAATHSS
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PRAGDGFIRLDTEGIVVYASPNALSAYHRMGLQSDLAGQDLAETTRSLITDPFDAQEVVG
CCCCCCEEEEECCCEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
DIQAALAGRTGRRMEVEARGATVLLRTLVLRPHGKLAGAAVLVRDVTEVKRRDRALLSKD
HHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ATIREIHHRVKNNLQTVAALLRLQARRTENEEAQVALTESVRRVTSIASVHEMLSMSVDE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EVDLDEVVDRLLPIMADVATVHTTRIKVRRAGSLGVFSAERATPLVMVLTELVQNAIEHA
CCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHH
FDSGQTGTVTIRSERSARWLDVIISDDGRGLPPGFSLEASDRLGLQIVRTLVTAELGGSI
HCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
GLHPGADVGTDAVLRVPLGRRSGR
CCCCCCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]