Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026498

Identifier: 54026498

GI number: 54026498

Start: 4694266

End: 4695444

Strand: Reverse

Name: 54026498

Synonym: nfa45250

Alternate gene names: NA

Gene position: 4695444-4694266 (Counterclockwise)

Preceding gene: 54026499

Following gene: 54026497

Centisome position: 77.98

GC content: 65.39

Gene sequence:

>1179_bases
GTGGCCGAAGCCCGTTCTGATGTCGACGAAGTTCGAGAAGCGGTGTCCGCGCAGGTGATCCTGGTCGTGGTGCACGGCAT
CATGTCCGACAGTTCTGCCTGGGATCCGCTGGTGGAACTCACTCGGGAGGACGCCGATCTGGGCGGCCGGGTCGGCATCC
TCCGGGTCGACTACCCGAGCAAGGCTGTCGAGCTGTCACCGTCCAGGCGCCTGCCAGACTTGGACACCGTCGCGGGGTGC
CTCACGACCCAGCTGACGGAGGAGCTGCCGCCCGACCTGCCGGTGGTGTTCGCCGCGCACAGCCAGGGGGGTTTGATCGT
GCAGCGGTATCTGGCGCAACAACTATCGGAGGGTCGCGGGCTCGAGCTGCGGCGGATCCGTCGGGTGTTGATGTTCGCGA
CACCGAACTCGGGATCGGAATATCTTCTGACGCTCCGTAAGAGGTGGCAGCGCAATCCCCAGGAACGCGAGCTACGACCC
ATCAACGACAAGATCATCGAGACCCAGCGGACAATTCTCGATCGGGTTGTAAACGCGGACGTGGCGACAGCCACGACTGT
GCCGATTCCGATCGAGGCTTACGCCGGGTTGACGGATCGGATCGTCCTGCCGCAATCAGCGAAGTCGGTCTTTCCTGAAT
GTGGAGTACTGCCGGGCGACCACTCCTCGATCATCCGGCCGTCCTCGACCCAGGCGCTGATGTATCGACTCGTGAAGAGC
CGCCTCCTGCAGGAGATCCGTCGGGGCGCAGACTCGCCGGGCCCGCCGACGATCGCGGGCGGCACCTCGGAACTGGATTA
TGGGATCGAGGTCGAACTCCGGGCCTCGTCGTTCGAGCCCGCGCGTGGGTGCCCGCTGTCGGACGACGCGGTCAGGGCGA
TCGCGGCGGCGCTGGCGGATATCCCCGACCTCGTGGACCCCGTTACGCGCAAACAGTTCATGCTGTGCATGCCGCGTTAC
GTTCGCGAGCGGCTGCTCCATGGCGGCGACAACCCCCGTATTGAGCTCAGCGCCCTGGTGCACCGATGCGCAGCCTTTGA
AGGAACTGGGCGCGACGCATTGGTCATCAGTCTCGAGTGGGCATTCGCGGTGGAAGATCCAGCGGTGGCGCGGGCGCTCG
CCGTGATCGAGCAGCAGTGGCCTGTCGCAGAGGCGGTGCGGGCCTCACACACGGTCTAG

Upstream 100 bases:

>100_bases
GACCTACCAGGACGCGGGCAGGTAGTTCCATCCCCTCAGGACGATCGGTTGTCCTGAATTAGCCTGTGCGCTATACCGTT
CGCCCCATAGAATCGCGGGG

Downstream 100 bases:

>100_bases
GCGCGATGGCGATGTGGACCGAGCTGTCGCGCCTGGCACCCGTCGGTGGCTGGTCGCCGGTGCGGCGAGTGTCGTGGCGC
TGGCCGTAGTGCTGGTGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MAEARSDVDEVREAVSAQVILVVVHGIMSDSSAWDPLVELTREDADLGGRVGILRVDYPSKAVELSPSRRLPDLDTVAGC
LTTQLTEELPPDLPVVFAAHSQGGLIVQRYLAQQLSEGRGLELRRIRRVLMFATPNSGSEYLLTLRKRWQRNPQERELRP
INDKIIETQRTILDRVVNADVATATTVPIPIEAYAGLTDRIVLPQSAKSVFPECGVLPGDHSSIIRPSSTQALMYRLVKS
RLLQEIRRGADSPGPPTIAGGTSELDYGIEVELRASSFEPARGCPLSDDAVRAIAAALADIPDLVDPVTRKQFMLCMPRY
VRERLLHGGDNPRIELSALVHRCAAFEGTGRDALVISLEWAFAVEDPAVARALAVIEQQWPVAEAVRASHTV

Sequences:

>Translated_392_residues
MAEARSDVDEVREAVSAQVILVVVHGIMSDSSAWDPLVELTREDADLGGRVGILRVDYPSKAVELSPSRRLPDLDTVAGC
LTTQLTEELPPDLPVVFAAHSQGGLIVQRYLAQQLSEGRGLELRRIRRVLMFATPNSGSEYLLTLRKRWQRNPQERELRP
INDKIIETQRTILDRVVNADVATATTVPIPIEAYAGLTDRIVLPQSAKSVFPECGVLPGDHSSIIRPSSTQALMYRLVKS
RLLQEIRRGADSPGPPTIAGGTSELDYGIEVELRASSFEPARGCPLSDDAVRAIAAALADIPDLVDPVTRKQFMLCMPRY
VRERLLHGGDNPRIELSALVHRCAAFEGTGRDALVISLEWAFAVEDPAVARALAVIEQQWPVAEAVRASHTV
>Mature_391_residues
AEARSDVDEVREAVSAQVILVVVHGIMSDSSAWDPLVELTREDADLGGRVGILRVDYPSKAVELSPSRRLPDLDTVAGCL
TTQLTEELPPDLPVVFAAHSQGGLIVQRYLAQQLSEGRGLELRRIRRVLMFATPNSGSEYLLTLRKRWQRNPQERELRPI
NDKIIETQRTILDRVVNADVATATTVPIPIEAYAGLTDRIVLPQSAKSVFPECGVLPGDHSSIIRPSSTQALMYRLVKSR
LLQEIRRGADSPGPPTIAGGTSELDYGIEVELRASSFEPARGCPLSDDAVRAIAAALADIPDLVDPVTRKQFMLCMPRYV
RERLLHGGDNPRIELSALVHRCAAFEGTGRDALVISLEWAFAVEDPAVARALAVIEQQWPVAEAVRASHTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42966; Mature: 42834

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEARSDVDEVREAVSAQVILVVVHGIMSDSSAWDPLVELTREDADLGGRVGILRVDYPS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCC
KAVELSPSRRLPDLDTVAGCLTTQLTEELPPDLPVVFAAHSQGGLIVQRYLAQQLSEGRG
CCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCC
LELRRIRRVLMFATPNSGSEYLLTLRKRWQRNPQERELRPINDKIIETQRTILDRVVNAD
CHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
VATATTVPIPIEAYAGLTDRIVLPQSAKSVFPECGVLPGDHSSIIRPSSTQALMYRLVKS
HHHEEECCCCHHHHCCCCCEEECCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
RLLQEIRRGADSPGPPTIAGGTSELDYGIEVELRASSFEPARGCPLSDDAVRAIAAALAD
HHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
IPDLVDPVTRKQFMLCMPRYVRERLLHGGDNPRIELSALVHRCAAFEGTGRDALVISLEW
CHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCCEEEEEEEE
AFAVEDPAVARALAVIEQQWPVAEAVRASHTV
EEEECCHHHHHHHHHHHHCCCHHHHHHHHCCC
>Mature Secondary Structure 
AEARSDVDEVREAVSAQVILVVVHGIMSDSSAWDPLVELTREDADLGGRVGILRVDYPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCC
KAVELSPSRRLPDLDTVAGCLTTQLTEELPPDLPVVFAAHSQGGLIVQRYLAQQLSEGRG
CCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCC
LELRRIRRVLMFATPNSGSEYLLTLRKRWQRNPQERELRPINDKIIETQRTILDRVVNAD
CHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
VATATTVPIPIEAYAGLTDRIVLPQSAKSVFPECGVLPGDHSSIIRPSSTQALMYRLVKS
HHHEEECCCCHHHHCCCCCEEECCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
RLLQEIRRGADSPGPPTIAGGTSELDYGIEVELRASSFEPARGCPLSDDAVRAIAAALAD
HHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
IPDLVDPVTRKQFMLCMPRYVRERLLHGGDNPRIELSALVHRCAAFEGTGRDALVISLEW
CHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCCEEEEEEEE
AFAVEDPAVARALAVIEQQWPVAEAVRASHTV
EEEECCHHHHHHHHHHHHCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA