Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026419

Identifier: 54026419

GI number: 54026419

Start: 4617064

End: 4617387

Strand: Reverse

Name: 54026419

Synonym: nfa44460

Alternate gene names: NA

Gene position: 4617387-4617064 (Counterclockwise)

Preceding gene: 54026424

Following gene: 54026418

Centisome position: 76.69

GC content: 70.68

Gene sequence:

>324_bases
ATGGCCCCGATATCGGCCGGTATCGGAGCCAGCTGTGTCCGTCTGGCAAGGTGCCCCAGGGCCGGCTCGGCCATCTTCGG
GAGGGCGAGTACGCGCCACGCGCGCCGGCCGTCCCGGCGGACGTCGCTGCGCAGCGCGTTCAGGCCCTCGGCCGCGCCGC
TCGATGTCGGCGCGCGCGGCCATCAGTTCACCCGCCGCCGCGATCCCCTCACGAACTCTCGCTACAACCGCTTCGCTGCC
CTGCGGGTCTCGCCGCGCTATGCCCCTGCCGATCCGCCCAAGCCGATTCCGCAGACCATAGACGGATTCAGCGTTCCTGT
ATGA

Upstream 100 bases:

>100_bases
CCGCGCGGCGCTTACCACTCCCGCTGAACAGCCGGCGAAAACCCATTGCCGCCTTGGCGTCACCGAGACTCGTGTCCCAT
GGTCGAGCAGTTCGGTGAGC

Downstream 100 bases:

>100_bases
CTATGGACAACGATAGAACGTCGAACAATGTTGTAAATCAGCGCGTGCGCGGTCTCGAAGTGAAACAAGCCTGTCGGACA
TTGCGACTATCGTGTGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MAPISAGIGASCVRLARCPRAGSAIFGRASTRHARRPSRRTSLRSAFRPSAAPLDVGARGHQFTRRRDPLTNSRYNRFAA
LRVSPRYAPADPPKPIPQTIDGFSVPV

Sequences:

>Translated_107_residues
MAPISAGIGASCVRLARCPRAGSAIFGRASTRHARRPSRRTSLRSAFRPSAAPLDVGARGHQFTRRRDPLTNSRYNRFAA
LRVSPRYAPADPPKPIPQTIDGFSVPV
>Mature_106_residues
APISAGIGASCVRLARCPRAGSAIFGRASTRHARRPSRRTSLRSAFRPSAAPLDVGARGHQFTRRRDPLTNSRYNRFAAL
RVSPRYAPADPPKPIPQTIDGFSVPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11622; Mature: 11491

Theoretical pI: Translated: 12.55; Mature: 12.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPISAGIGASCVRLARCPRAGSAIFGRASTRHARRPSRRTSLRSAFRPSAAPLDVGARG
CCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCCC
HQFTRRRDPLTNSRYNRFAALRVSPRYAPADPPKPIPQTIDGFSVPV
CCCHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
APISAGIGASCVRLARCPRAGSAIFGRASTRHARRPSRRTSLRSAFRPSAAPLDVGARG
CCCCCCCCHHHHHHHHCCCCCCEEECCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCCC
HQFTRRRDPLTNSRYNRFAALRVSPRYAPADPPKPIPQTIDGFSVPV
CCCHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA