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The map label for this gene is ygbT [H]

Identifier: 54026395

GI number: 54026395

Start: 4584578

End: 4585891

Strand: Reverse

Name: ygbT [H]

Synonym: nfa44220

Alternate gene names: 54026395

Gene position: 4585891-4584578 (Counterclockwise)

Preceding gene: 54026396

Following gene: 54026392

Centisome position: 76.16

GC content: 67.12

Gene sequence:

>1314_bases
ATGAGTGACCAGCCGAGCGCGCGGCCGAACCGCATCGGTGAACTGGTCAGGGCGCGTGACCGGCTGTCGTTCATCTACCT
GGAACGCGCAACGGTCCACCGCGACGGCAACGCCATCACCGCCACCGACGAACGGGGTGTCGTCCACATTCCAGCTGCCA
CCGTGGGTGCCCTGTTACTCGGGCCGGGGACCCGCGTCACGCATCAAGCGATGATGCTGCTCGCCGAAAGCGGATCCACG
GCCGTGTGGGTGGGCGAGCGGGGCGTGCGCTACTACGCGCACGGCCGGAGCCTGGCTCGCAGTTCGCGGTTACTCGACGC
GCAGGCTGCGGCTGTCACCAACCAGGCCGGCCGGTTGCGGGTCGCTCGAGCGATGTACGAGATGCGGTTTCCCGGCGAAG
ATGTCAGTGGCTTGACGATGCAGCAATTACGCGGACGGGAAGGCGCCAGAATCCGCCGACTCTATCGTCTGCACGCCGAA
AGCGTCGGAATCGAATGGGAGCGCCGCCAATACAACCCGGACGATTTCGCATCCGGCGACGCCATCAACCAAGCGCTCTC
CGCCGCGACAACCTGCCTGTACGGGATCGTGCACGCAGTCGTGGTCGCCCTCGGTTGCGCGCCCGGACTGGGTTTCGTCC
ACACCGGCCACGAGCGATCCTTCGTCTTCGACCTGGCCGATCTCTACAAGGCGGAGTTCGCGATTCCGCCGGCTTTCGAC
GCCGTAGCCGAAGGCGGTGACGACATCCCCCAACCCGACGCGCCGTCCGCGACGCCATCCACGCCGGGCATCTCCTCGAA
CGGTGCTGCTCGGACATCTACGCTCTCCTGCTGCCCGACGAACCCGACGGCGCCGCCGAATGGGACACCGACATCGTCGA
GCTGTGGGACCGCAAGGGAAACGTCGCGGGCGGAACCTCCTACAGCGACGAGGATGTCCCGTGGTAGTGCTCGTACTCAG
CGCCTGCCCCGCCGGCCTCCGCGGCCACCTCACCCGGTGGTTCCTCGAAATCAGCCCGGGCGTATTCGTCGGGATCGTCA
GCGCGCGCGTGCGCGAACTCGCATGGCAGCGAGTCGTCGAACTCGCCAAGGACGGCCGCGCCATCATTATCCACTCCACG
AAAGGAGAACAGCGCCTCGCGTTCACAGTCCACCGACACGACTGGGAACCGGTCGACTTCGACGGCCTCCACTTGATGCG
CCGGCCGCACACCAGCGCCGTCAGTTCAGGAGGCGCACGGGCCGGTTGGAGCAAGGCCAGCCGGTACCACCGAGCCGCCC
GGAAACGCGCGGCGGGTGGGGGTGCGGAAAGTGA

Upstream 100 bases:

>100_bases
TCGCGGTGAGCGACCCGGAGAAACTCCGGACCGCATTGGTGAACGGAATCGGACGCGCCAAAGGGTACGGCTGCGGCCTG
CTGACCCTTGCTCCGATCGC

Downstream 100 bases:

>100_bases
ATGAAAAATGGGTGATCGGCTTGGAAACGTGCAGGTCAGGAAGTGTGCTCCCCGCGCGTGCGGGGATGAGCCCTGCTGGC
GTGGAACCAGGCGCGGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MSDQPSARPNRIGELVRARDRLSFIYLERATVHRDGNAITATDERGVVHIPAATVGALLLGPGTRVTHQAMMLLAESGST
AVWVGERGVRYYAHGRSLARSSRLLDAQAAAVTNQAGRLRVARAMYEMRFPGEDVSGLTMQQLRGREGARIRRLYRLHAE
SVGIEWERRQYNPDDFASGDAINQALSAATTCLYGIVHAVVVALGCAPGLGFVHTGHERSFVFDLADLYKAEFAIPPAFD
AVAEGGDDIPQPDAPSATPSTPGISSNGAARTSTLSCCPTNPTAPPNGTPTSSSCGTARETSRAEPPTATRMSRGSARTQ
RLPRRPPRPPHPVVPRNQPGRIRRDRQRARARTRMAASRRTRQGRPRHHYPLHERRTAPRVHSPPTRLGTGRLRRPPLDA
PAAHQRRQFRRRTGRLEQGQPVPPSRPETRGGWGCGK

Sequences:

>Translated_437_residues
MSDQPSARPNRIGELVRARDRLSFIYLERATVHRDGNAITATDERGVVHIPAATVGALLLGPGTRVTHQAMMLLAESGST
AVWVGERGVRYYAHGRSLARSSRLLDAQAAAVTNQAGRLRVARAMYEMRFPGEDVSGLTMQQLRGREGARIRRLYRLHAE
SVGIEWERRQYNPDDFASGDAINQALSAATTCLYGIVHAVVVALGCAPGLGFVHTGHERSFVFDLADLYKAEFAIPPAFD
AVAEGGDDIPQPDAPSATPSTPGISSNGAARTSTLSCCPTNPTAPPNGTPTSSSCGTARETSRAEPPTATRMSRGSARTQ
RLPRRPPRPPHPVVPRNQPGRIRRDRQRARARTRMAASRRTRQGRPRHHYPLHERRTAPRVHSPPTRLGTGRLRRPPLDA
PAAHQRRQFRRRTGRLEQGQPVPPSRPETRGGWGCGK
>Mature_436_residues
SDQPSARPNRIGELVRARDRLSFIYLERATVHRDGNAITATDERGVVHIPAATVGALLLGPGTRVTHQAMMLLAESGSTA
VWVGERGVRYYAHGRSLARSSRLLDAQAAAVTNQAGRLRVARAMYEMRFPGEDVSGLTMQQLRGREGARIRRLYRLHAES
VGIEWERRQYNPDDFASGDAINQALSAATTCLYGIVHAVVVALGCAPGLGFVHTGHERSFVFDLADLYKAEFAIPPAFDA
VAEGGDDIPQPDAPSATPSTPGISSNGAARTSTLSCCPTNPTAPPNGTPTSSSCGTARETSRAEPPTATRMSRGSARTQR
LPRRPPRPPHPVVPRNQPGRIRRDRQRARARTRMAASRRTRQGRPRHHYPLHERRTAPRVHSPPTRLGTGRLRRPPLDAP
AAHQRRQFRRRTGRLEQGQPVPPSRPETRGGWGCGK

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789113, Length=224, Percent_Identity=44.6428571428571, Blast_Score=198, Evalue=6e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019851 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 47805; Mature: 47673

Theoretical pI: Translated: 11.94; Mature: 11.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQPSARPNRIGELVRARDRLSFIYLERATVHRDGNAITATDERGVVHIPAATVGALLL
CCCCCCCCHHHHHHHHHHHHHHEEEEEEHHEEECCCCEEEECCCCCEEEECHHHHHHHHC
GPGTRVTHQAMMLLAESGSTAVWVGERGVRYYAHGRSLARSSRLLDAQAAAVTNQAGRLR
CCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VARAMYEMRFPGEDVSGLTMQQLRGREGARIRRLYRLHAESVGIEWERRQYNPDDFASGD
HHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCH
AINQALSAATTCLYGIVHAVVVALGCAPGLGFVHTGHERSFVFDLADLYKAEFAIPPAFD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCHH
AVAEGGDDIPQPDAPSATPSTPGISSNGAARTSTLSCCPTNPTAPPNGTPTSSSCGTARE
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHH
TSRAEPPTATRMSRGSARTQRLPRRPPRPPHPVVPRNQPGRIRRDRQRARARTRMAASRR
HCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TRQGRPRHHYPLHERRTAPRVHSPPTRLGTGRLRRPPLDAPAAHQRRQFRRRTGRLEQGQ
HHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
PVPPSRPETRGGWGCGK
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDQPSARPNRIGELVRARDRLSFIYLERATVHRDGNAITATDERGVVHIPAATVGALLL
CCCCCCCHHHHHHHHHHHHHHEEEEEEHHEEECCCCEEEECCCCCEEEECHHHHHHHHC
GPGTRVTHQAMMLLAESGSTAVWVGERGVRYYAHGRSLARSSRLLDAQAAAVTNQAGRLR
CCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VARAMYEMRFPGEDVSGLTMQQLRGREGARIRRLYRLHAESVGIEWERRQYNPDDFASGD
HHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCH
AINQALSAATTCLYGIVHAVVVALGCAPGLGFVHTGHERSFVFDLADLYKAEFAIPPAFD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCHH
AVAEGGDDIPQPDAPSATPSTPGISSNGAARTSTLSCCPTNPTAPPNGTPTSSSCGTARE
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHH
TSRAEPPTATRMSRGSARTQRLPRRPPRPPHPVVPRNQPGRIRRDRQRARARTRMAASRR
HCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TRQGRPRHHYPLHERRTAPRVHSPPTRLGTGRLRRPPLDAPAAHQRRQFRRRTGRLEQGQ
HHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
PVPPSRPETRGGWGCGK
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]