Click here to switch to the map view.

The map label for this gene is yfiJ [H]

Identifier: 54026218

GI number: 54026218

Start: 4397534

End: 4398844

Strand: Reverse

Name: yfiJ [H]

Synonym: nfa42470

Alternate gene names: 54026218

Gene position: 4398844-4397534 (Counterclockwise)

Preceding gene: 54026222

Following gene: 54026217

Centisome position: 73.06

GC content: 73.46

Gene sequence:

>1311_bases
ATGGATGTGCTCCAGGCCACGCCGGTGGGCGTCCGCGCGGGGGTGCCGTTCCGGCGCAGCGGCACCGTCCGTGACCGTTT
GGCGGCCTTCGTGCGTCAGCCGGTCGCGGTGTTCCGCCGGAACCTGGAAGAGCTGCCGTTCGACTACCCGCCTGCCGTGC
TGCTGTGCGCCGACGCGGCGCTGCTGCTGTTCAGCGTGGGCGCGTGCGTGCAGCGCCACGAGTACTTCCCGACGCTGCTG
CCGGTGCTGGCCGTGGTGCTGCTGTTCCTGCCGCTGCCGTTGTTCGGCCTGCTGGGCGTGACACCGACCCCGATCCTGCT
GGGCGGGGCGGCGCTGGTGGCGGCCGGGCTGTTCCTGCTGCAACCGGTGCCCGCCGATCTGGCGCCGTTCGTCCTCGTCG
TCGTGGTCGGCGAGGTGGCCGCCATCGCGCCGAAGCGCTGGAGTGCGCTGTTCGCGGCGCTCGCCGTGGCGGAACTGGTC
GCCTTCGACGCCGCCGGGCACCTGCTGTGGAGCGCGAGCGGACAGCGATTGCAGGGTCTGCAGATGTACACCACCGGGAT
CGCGCTGGGCTGGCTGGTCGGGGTGATGCTGCGGTATCAGCGCCGCTTCCTCTACCAGGAGCGGGAGAGCCAGTACATCC
GCACCGTGCAGGCCGCCGAGGAGGAACGCAGGCGGATCGCCCGCGAGGTGCACGACGTCATCGCGCATTCGCTGAGCGTC
ACCCTGCTGCACCTCACCGCCGCCCGGCACGCGTTGCAGACCGACCGCGACGTGGACGAGGCGGTGGATGCGCTGGTCGA
TGCCGAGCGGCTGGGCAGGCAGGCGATGGCCGACATCCGGCGCACCGTCGGCCTGCTCGGCGAACGCACCGCGAGCCCCG
CCCCCGAACCGGGTGTCGGTGATCTGCCCGAGCTGATCGCCGACTTCGCCAAGGCCGGGCTGCGGATCGAGCACGCGCAC
GTCGACGCCGATCTGGACGCGGTATCGGCCGCGGTCGGGCTGGCGCTGTACCGGATCGGGCAGGAGTCGCTGGCCAACGT
GGTCAAGCACGCGCCCGGCGCGACGGTGCGGGTGGAGGTGCGGGTGCGGGCGGGCGCGGCGACGCTGCTCGTGCACAACA
CCCTGCCCGACGGGTTGCCCGCCCGGGGCGAGGGCATGGGCCTGTCCGGGATGCGTCAGCGCGCCGACCTGCTCGGTGGC
CGGCTCACCGCGGGTCCGGTCGACGACGGGTGGAGCGTGCGCGCCCGGTTCCCGCTGGCCGGTGGGCGCGCCTGGCCGCT
GTGCTCGGGCGAGAGCGGGGAGCGCGGGTGA

Upstream 100 bases:

>100_bases
GTCGTGCCTGGGCACCGAATCCGCGTCCTACCGTGGTAGGAGTTCCCGACCTGTCGCGGGACGATGTGCGCGGGGCGGTG
CCGGGGCTAGCCTGGTCGGC

Downstream 100 bases:

>100_bases
CGGCCGCGCACGGGGCCGACGACCGCCCGCTGACCGTCCTGGTCGTCGACGATCAGGAACTGGTGCGCGGCGGACTACGC
CGCATCCTGCGCCGCCGCGA

Product: putative two-component system sensor kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MDVLQATPVGVRAGVPFRRSGTVRDRLAAFVRQPVAVFRRNLEELPFDYPPAVLLCADAALLLFSVGACVQRHEYFPTLL
PVLAVVLLFLPLPLFGLLGVTPTPILLGGAALVAAGLFLLQPVPADLAPFVLVVVVGEVAAIAPKRWSALFAALAVAELV
AFDAAGHLLWSASGQRLQGLQMYTTGIALGWLVGVMLRYQRRFLYQERESQYIRTVQAAEEERRRIAREVHDVIAHSLSV
TLLHLTAARHALQTDRDVDEAVDALVDAERLGRQAMADIRRTVGLLGERTASPAPEPGVGDLPELIADFAKAGLRIEHAH
VDADLDAVSAAVGLALYRIGQESLANVVKHAPGATVRVEVRVRAGAATLLVHNTLPDGLPARGEGMGLSGMRQRADLLGG
RLTAGPVDDGWSVRARFPLAGGRAWPLCSGESGERG

Sequences:

>Translated_436_residues
MDVLQATPVGVRAGVPFRRSGTVRDRLAAFVRQPVAVFRRNLEELPFDYPPAVLLCADAALLLFSVGACVQRHEYFPTLL
PVLAVVLLFLPLPLFGLLGVTPTPILLGGAALVAAGLFLLQPVPADLAPFVLVVVVGEVAAIAPKRWSALFAALAVAELV
AFDAAGHLLWSASGQRLQGLQMYTTGIALGWLVGVMLRYQRRFLYQERESQYIRTVQAAEEERRRIAREVHDVIAHSLSV
TLLHLTAARHALQTDRDVDEAVDALVDAERLGRQAMADIRRTVGLLGERTASPAPEPGVGDLPELIADFAKAGLRIEHAH
VDADLDAVSAAVGLALYRIGQESLANVVKHAPGATVRVEVRVRAGAATLLVHNTLPDGLPARGEGMGLSGMRQRADLLGG
RLTAGPVDDGWSVRARFPLAGGRAWPLCSGESGERG
>Mature_436_residues
MDVLQATPVGVRAGVPFRRSGTVRDRLAAFVRQPVAVFRRNLEELPFDYPPAVLLCADAALLLFSVGACVQRHEYFPTLL
PVLAVVLLFLPLPLFGLLGVTPTPILLGGAALVAAGLFLLQPVPADLAPFVLVVVVGEVAAIAPKRWSALFAALAVAELV
AFDAAGHLLWSASGQRLQGLQMYTTGIALGWLVGVMLRYQRRFLYQERESQYIRTVQAAEEERRRIAREVHDVIAHSLSV
TLLHLTAARHALQTDRDVDEAVDALVDAERLGRQAMADIRRTVGLLGERTASPAPEPGVGDLPELIADFAKAGLRIEHAH
VDADLDAVSAAVGLALYRIGQESLANVVKHAPGATVRVEVRVRAGAATLLVHNTLPDGLPARGEGMGLSGMRQRADLLGG
RLTAGPVDDGWSVRARFPLAGGRAWPLCSGESGERG

Specific function: Member of the two-component regulatory system yfiJ/yfiK. Probably activates yfiK by phosphorylation [H]

COG id: COG4585

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011712 [H]

Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 46621; Mature: 46621

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]