| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is pfkA [H]
Identifier: 54026212
GI number: 54026212
Start: 4390165
End: 4391199
Strand: Reverse
Name: pfkA [H]
Synonym: nfa42410
Alternate gene names: 54026212
Gene position: 4391199-4390165 (Counterclockwise)
Preceding gene: 54026213
Following gene: 54026211
Centisome position: 72.93
GC content: 68.89
Gene sequence:
>1035_bases ATGCGCATCGGAGTCTTGACCGGAGGCGGGGACTGTCCAGGACTGAACGCGGTCATCCGCGCTGTCGTTCGTACCGCGAA CGGCCGCTACGGTGACGCGATCGTGGGATTCCAGGACGGCTGGCGCGGCCTATTGGAAGACCGCAAGATCAACATCCTCA ACGACGACCGCACCGACCGGCTGCTCAACAAGGGCGGCACCATGCTCGGCACCGCGCGCACCAACCCCGACGTGCTGCGC GCCGGGCTCGGCAAGATCAAACAGACGCTCGACGACAACGGCATCGAGGCACTCATCCCGATCGGCGGCGAGGGCACCCT CACCGCGGCCAGCTGGCTCTCCGACGAGGGGGTGCCGGTGGTCGGCGTCCCCAAGACCATCGACAACGACATCGACTGCA CCGATGTCACCTTCGGCCACGACACCGCCCTGAGCATCGCCACCGAGGCCATCGACCGGCTGCACACCACCGCCGAATCG CACCAGCGCGTGATGCTGGTCGAGGTGATGGGCAGGCACGCGGGCTGGATCGCGGTCAACTCGGGCATGGCCGCGGGCGC CCACCTCACCCTGGTGCCGGAGGAACCCTTCGACGTCGACGAGGTGTGCACGATGATCAAGCGGCGCTTCCAGCGCGGCG ACAAGCATTTCATCTGCGTGGTGGCCGAGGGCTCGCATCCCGCGCCCGATTCCGGGTTCACCCTGCGCGAGGGTGGTGTC GACGAGTTCGGCCACGAGCGGTTCACCGGCGTGGCGCAACAGCTGGGCACCGAGATCGAGCGCCGCATCGGCAAGGAGGT GCGCACCACCGTCCTCGGTCACGTGCAGCGCGGCGGCAGCCCCACCCCCTACGACCGGGTACTGGCGACCCGCTTCGGCC TGCACGCCGCCGAGGCCGTGCACGCCGGACATTTCGGCCAGATGGTCGCGCTGCACGGCACCGCCATCGAACTGGTGCCG CTGGCCGAGGCGACCAAGCAGCTCAAGCGCGTGCCCACCGAGCGGTACCGGGAGGCGCAGGCGTTCTTCGGGTGA
Upstream 100 bases:
>100_bases ACGAACTCGCGGGTGGCAGCTGCCCGTCCTGACCGGGCGCGACGCGGCGTTGCCGGGGTCGCGGCTGCCGGAATCGCGCG CGAGGGGCAAGATAGCGGCC
Downstream 100 bases:
>100_bases CCCGCTGACATCGTCGGGGCCGCGAATTAGGCTGGCCGCCATGGTTTTCCTCGACGACGCCCCGGCCTGCCCGAACAGCT TGGATCTGCCCGCCGAGACG
Product: 6-phosphofructokinase
Products: NA
Alternate protein names: Phosphofructokinase; Phosphohexokinase [H]
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MRIGVLTGGGDCPGLNAVIRAVVRTANGRYGDAIVGFQDGWRGLLEDRKINILNDDRTDRLLNKGGTMLGTARTNPDVLR AGLGKIKQTLDDNGIEALIPIGGEGTLTAASWLSDEGVPVVGVPKTIDNDIDCTDVTFGHDTALSIATEAIDRLHTTAES HQRVMLVEVMGRHAGWIAVNSGMAAGAHLTLVPEEPFDVDEVCTMIKRRFQRGDKHFICVVAEGSHPAPDSGFTLREGGV DEFGHERFTGVAQQLGTEIERRIGKEVRTTVLGHVQRGGSPTPYDRVLATRFGLHAAEAVHAGHFGQMVALHGTAIELVP LAEATKQLKRVPTERYREAQAFFG
Sequences:
>Translated_344_residues MRIGVLTGGGDCPGLNAVIRAVVRTANGRYGDAIVGFQDGWRGLLEDRKINILNDDRTDRLLNKGGTMLGTARTNPDVLR AGLGKIKQTLDDNGIEALIPIGGEGTLTAASWLSDEGVPVVGVPKTIDNDIDCTDVTFGHDTALSIATEAIDRLHTTAES HQRVMLVEVMGRHAGWIAVNSGMAAGAHLTLVPEEPFDVDEVCTMIKRRFQRGDKHFICVVAEGSHPAPDSGFTLREGGV DEFGHERFTGVAQQLGTEIERRIGKEVRTTVLGHVQRGGSPTPYDRVLATRFGLHAAEAVHAGHFGQMVALHGTAIELVP LAEATKQLKRVPTERYREAQAFFG >Mature_344_residues MRIGVLTGGGDCPGLNAVIRAVVRTANGRYGDAIVGFQDGWRGLLEDRKINILNDDRTDRLLNKGGTMLGTARTNPDVLR AGLGKIKQTLDDNGIEALIPIGGEGTLTAASWLSDEGVPVVGVPKTIDNDIDCTDVTFGHDTALSIATEAIDRLHTTAES HQRVMLVEVMGRHAGWIAVNSGMAAGAHLTLVPEEPFDVDEVCTMIKRRFQRGDKHFICVVAEGSHPAPDSGFTLREGGV DEFGHERFTGVAQQLGTEIERRIGKEVRTTVLGHVQRGGSPTPYDRVLATRFGLHAAEAVHAGHFGQMVALHGTAIELVP LAEATKQLKRVPTERYREAQAFFG
Specific function: Key control step of glycolysis. [C]
COG id: COG0205
COG function: function code G; 6-phosphofructokinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphofructokinase family [H]
Homologues:
Organism=Homo sapiens, GI11321601, Length=361, Percent_Identity=33.7950138504155, Blast_Score=168, Evalue=5e-42, Organism=Homo sapiens, GI48762920, Length=377, Percent_Identity=33.42175066313, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI266453768, Length=360, Percent_Identity=34.4444444444444, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI266453748, Length=360, Percent_Identity=34.4444444444444, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI4505749, Length=360, Percent_Identity=34.4444444444444, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI266453619, Length=360, Percent_Identity=34.4444444444444, Blast_Score=166, Evalue=4e-41, Organism=Escherichia coli, GI1790350, Length=330, Percent_Identity=40.6060606060606, Blast_Score=226, Evalue=2e-60, Organism=Caenorhabditis elegans, GI25147584, Length=369, Percent_Identity=29.2682926829268, Blast_Score=149, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17558788, Length=327, Percent_Identity=32.4159021406728, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI72003601, Length=366, Percent_Identity=25.9562841530055, Blast_Score=124, Evalue=7e-29, Organism=Saccharomyces cerevisiae, GI6323861, Length=364, Percent_Identity=34.0659340659341, Blast_Score=157, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6321679, Length=365, Percent_Identity=33.6986301369863, Blast_Score=157, Evalue=3e-39, Organism=Drosophila melanogaster, GI28573326, Length=359, Percent_Identity=34.5403899721448, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24652337, Length=359, Percent_Identity=34.2618384401114, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI17647809, Length=359, Percent_Identity=34.2618384401114, Blast_Score=170, Evalue=1e-42,
Paralogues:
None
Copy number: 3981 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 950 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012003 - InterPro: IPR012829 - InterPro: IPR022953 - InterPro: IPR015912 - InterPro: IPR000023 [H]
Pfam domain/function: PF00365 PFK [H]
EC number: =2.7.1.11 [H]
Molecular weight: Translated: 37052; Mature: 37052
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS00433 PHOSPHOFRUCTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGVLTGGGDCPGLNAVIRAVVRTANGRYGDAIVGFQDGWRGLLEDRKINILNDDRTDR CEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHCCCEEEEECCCHHHH LLNKGGTMLGTARTNPDVLRAGLGKIKQTLDDNGIEALIPIGGEGTLTAASWLSDEGVPV HHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEHHHHCCCCCCEE VGVPKTIDNDIDCTDVTFGHDTALSIATEAIDRLHTTAESHQRVMLVEVMGRHAGWIAVN EECCHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEHHCCCCCEEEEE SGMAAGAHLTLVPEEPFDVDEVCTMIKRRFQRGDKHFICVVAEGSHPAPDSGFTLREGGV CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEECCCCC DEFGHERFTGVAQQLGTEIERRIGKEVRTTVLGHVQRGGSPTPYDRVLATRFGLHAAEAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHH HAGHFGQMVALHGTAIELVPLAEATKQLKRVPTERYREAQAFFG HHCCCCCEEEECCCEEEEEEHHHHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure MRIGVLTGGGDCPGLNAVIRAVVRTANGRYGDAIVGFQDGWRGLLEDRKINILNDDRTDR CEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHCCCEEEEECCCHHHH LLNKGGTMLGTARTNPDVLRAGLGKIKQTLDDNGIEALIPIGGEGTLTAASWLSDEGVPV HHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEHHHHCCCCCCEE VGVPKTIDNDIDCTDVTFGHDTALSIATEAIDRLHTTAESHQRVMLVEVMGRHAGWIAVN EECCHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEHHCCCCCEEEEE SGMAAGAHLTLVPEEPFDVDEVCTMIKRRFQRGDKHFICVVAEGSHPAPDSGFTLREGGV CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEECCCCC DEFGHERFTGVAQQLGTEIERRIGKEVRTTVLGHVQRGGSPTPYDRVLATRFGLHAAEAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHH HAGHFGQMVALHGTAIELVPLAEATKQLKRVPTERYREAQAFFG HHCCCCCEEEECCCEEEEEEHHHHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]