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The map label for this gene is rpmF

Identifier: 54026156

GI number: 54026156

Start: 4333614

End: 4333796

Strand: Reverse

Name: rpmF

Synonym: nfa41850

Alternate gene names: 54026156

Gene position: 4333796-4333614 (Counterclockwise)

Preceding gene: 54026157

Following gene: 54026155

Centisome position: 71.98

GC content: 70.49

Gene sequence:

>183_bases
GTGGCCGTTCCCAAGCGCCGGATGTCCCGTTCCAACACCAGGTCGCGGCGCAGCCAGTGGAAGGCTGCGGCGCCGACTCT
GATCACCTGCCCGAACCGGGCCTGCGGCCAGAAGACTCTGCCGCACATCGCGTGCCCCTCCTGCGGCACCTACAAGGGCC
GCCAGGTCACCGCCGCCGTCTGA

Upstream 100 bases:

>100_bases
CGGCACCGGCGGTCCCGATGCGGACGCCGACCCAGACCGATAGCGCAAGACCCCCGTCAGCCGTCACCGGCAGAGTAATA
GGACAAGAGGAGAAGTAGTC

Downstream 100 bases:

>100_bases
CCGGTTCGACCCCCTGACATCGAACGTGACGGCCAGCAAGGACGACGCGGGCGCGTCCGATGATCACGCGAGCCTGCTCG
AGGCCCTCGGTGTCGACGTA

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MAVPKRRMSRSNTRSRRSQWKAAAPTLITCPNRACGQKTLPHIACPSCGTYKGRQVTAAV

Sequences:

>Translated_60_residues
MAVPKRRMSRSNTRSRRSQWKAAAPTLITCPNRACGQKTLPHIACPSCGTYKGRQVTAAV
>Mature_59_residues
AVPKRRMSRSNTRSRRSQWKAAAPTLITCPNRACGQKTLPHIACPSCGTYKGRQVTAAV

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL321_NOCFA (Q5YS07)

Other databases:

- EMBL:   AP006618
- RefSeq:   YP_120398.1
- ProteinModelPortal:   Q5YS07
- SMR:   Q5YS07
- GeneID:   3111499
- GenomeReviews:   AP006618_GR
- KEGG:   nfa:nfa41850
- NMPDR:   fig|247156.1.peg.4035
- HOGENOM:   HBG728381
- OMA:   HIACPSC
- ProtClustDB:   PRK12286
- BioCyc:   NFAR247156:NFA41850-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6572; Mature: 6441

Theoretical pI: Translated: 12.08; Mature: 12.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKRRMSRSNTRSRRSQWKAAAPTLITCPNRACGQKTLPHIACPSCGTYKGRQVTAAV
CCCCCCHHHCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCCCCEEEECC
>Mature Secondary Structure 
AVPKRRMSRSNTRSRRSQWKAAAPTLITCPNRACGQKTLPHIACPSCGTYKGRQVTAAV
CCCCCHHHCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA