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The map label for this gene is ygiC [C]

Identifier: 54026142

GI number: 54026142

Start: 4321605

End: 4322771

Strand: Reverse

Name: ygiC [C]

Synonym: nfa41710

Alternate gene names: 54026142

Gene position: 4322771-4321605 (Counterclockwise)

Preceding gene: 54026143

Following gene: 54026141

Centisome position: 71.79

GC content: 67.61

Gene sequence:

>1167_bases
ATGCGTCGCGTGCGGGGGACCCCGCGTCCGGGCTGGCAGCGCATCATCGAAGAACAGGGTCTCGTCTACGGCTCACCCGG
CCGGGACGCCCACGGTGCGCCGCGGCCCTACTGGGACGAGTCGGTGCACTACGAATTCGACATGGCCGAGATCCTCGCCC
TGGAAGCCGATGTCGAACTGCTGCACTCGATGTGCCTGAACGCCGTCGAGCATGTGGTGCTCACCGAACGGTTCCGGGAT
TTCGGTCTGCCGGAATGGAGCTGGGCACCGATCGCCGAATCCTGGCGGCGTGGCGACCCCTACGTCTACGGCCGCTTCGA
CCTGCGCTACGACGCCCGGCGGCCGGCGAAACTGCTGGAATACAACGCCGACACCCCCACCTCGTTGCTCGAGGCCGCGA
TCGTGCAGTGGCACTGGCTCACCGACACCCACCCCGGCGACGACCAGTGGAACTCGCTGCACGAGAAGCTGGTCGAGCGC
TGGGGCGAGCTGCGCAAGCAGCTGCCCGATCCGCAGTTGCACTTCGCCTGGTCCTCGGCCGACGCCTCCGGTGAGGACAA
CGTGACCACGGCCTACATGCAGGAGACCGCCGCCGAGGCCGGATTCGACACGATCGCCCTGCCGATCGAGGAGATCGGCT
GGGACGTCGAGCTGGAACGTTTCGTCGATCTCGCCGAGGCGCCCATCGAGGCGATCTTCAAGCTCTACCCGTGGGAGTGG
GTGCTCGACGACGACTTCGGCAGGAAGGTCGTCGCGAGCCTGCCGGAGACCGCCTGGATCGAGCCGCTGTGGAAGGCGTT
GCTGAGCAACAAGGCGATTCTCGCGGTGCTGTGGGAGATGTATCCCGGGCATCCGAATCTGTTGCCCGCCTACCTCGACG
AGCCGCACGAACTCACCGAGTACATCCGCAAGCCCAAGCTCGGCCGCGAGGGCGCGAACATGACGATCGTGGGCGCGGGC
CTCGAGACCGCCACCGGCGGCGTGTACGGCGCCGAGGGGTACGTCTATCAGCTGCTGGACCCACTGCCCGAATTCGACGG
CATGCGACCGGTACTCGGCGCGTGGATGGTCGGCGACACCTCCGCCGGGCTGGGCATCCGCGAAACCGCCGGGCTGATCA
CCGACGACGGCGCCGCCTTCGTGCCGCACCGCATCCCGACCGACTAG

Upstream 100 bases:

>100_bases
CCACGGTCAAGCCCAAGAGCGCGCAGATCACCACCAAGTCCGGGACCACGATCCAGCGCGGTGGCCTGGGCAGCAAGAGC
ACCGGTGGCGGTGGTTCCTG

Downstream 100 bases:

>100_bases
CTCGCACCGCACCTCTTTCGTTCGACACCTTCCGGAAGGATCACGATGACCGCAGTCGCCCTCGAATCGGGGTACTGGAG
CGCGCTCGGCGAGGGCGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MRRVRGTPRPGWQRIIEEQGLVYGSPGRDAHGAPRPYWDESVHYEFDMAEILALEADVELLHSMCLNAVEHVVLTERFRD
FGLPEWSWAPIAESWRRGDPYVYGRFDLRYDARRPAKLLEYNADTPTSLLEAAIVQWHWLTDTHPGDDQWNSLHEKLVER
WGELRKQLPDPQLHFAWSSADASGEDNVTTAYMQETAAEAGFDTIALPIEEIGWDVELERFVDLAEAPIEAIFKLYPWEW
VLDDDFGRKVVASLPETAWIEPLWKALLSNKAILAVLWEMYPGHPNLLPAYLDEPHELTEYIRKPKLGREGANMTIVGAG
LETATGGVYGAEGYVYQLLDPLPEFDGMRPVLGAWMVGDTSAGLGIRETAGLITDDGAAFVPHRIPTD

Sequences:

>Translated_388_residues
MRRVRGTPRPGWQRIIEEQGLVYGSPGRDAHGAPRPYWDESVHYEFDMAEILALEADVELLHSMCLNAVEHVVLTERFRD
FGLPEWSWAPIAESWRRGDPYVYGRFDLRYDARRPAKLLEYNADTPTSLLEAAIVQWHWLTDTHPGDDQWNSLHEKLVER
WGELRKQLPDPQLHFAWSSADASGEDNVTTAYMQETAAEAGFDTIALPIEEIGWDVELERFVDLAEAPIEAIFKLYPWEW
VLDDDFGRKVVASLPETAWIEPLWKALLSNKAILAVLWEMYPGHPNLLPAYLDEPHELTEYIRKPKLGREGANMTIVGAG
LETATGGVYGAEGYVYQLLDPLPEFDGMRPVLGAWMVGDTSAGLGIRETAGLITDDGAAFVPHRIPTD
>Mature_388_residues
MRRVRGTPRPGWQRIIEEQGLVYGSPGRDAHGAPRPYWDESVHYEFDMAEILALEADVELLHSMCLNAVEHVVLTERFRD
FGLPEWSWAPIAESWRRGDPYVYGRFDLRYDARRPAKLLEYNADTPTSLLEAAIVQWHWLTDTHPGDDQWNSLHEKLVER
WGELRKQLPDPQLHFAWSSADASGEDNVTTAYMQETAAEAGFDTIALPIEEIGWDVELERFVDLAEAPIEAIFKLYPWEW
VLDDDFGRKVVASLPETAWIEPLWKALLSNKAILAVLWEMYPGHPNLLPAYLDEPHELTEYIRKPKLGREGANMTIVGAG
LETATGGVYGAEGYVYQLLDPLPEFDGMRPVLGAWMVGDTSAGLGIRETAGLITDDGAAFVPHRIPTD

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=393, Percent_Identity=41.9847328244275, Blast_Score=282, Evalue=2e-77,
Organism=Escherichia coli, GI1790629, Length=363, Percent_Identity=40.495867768595, Blast_Score=250, Evalue=9e-68,
Organism=Escherichia coli, GI1789361, Length=350, Percent_Identity=27.4285714285714, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 43907; Mature: 43907

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVRGTPRPGWQRIIEEQGLVYGSPGRDAHGAPRPYWDESVHYEFDMAEILALEADVEL
CCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHH
LHSMCLNAVEHVVLTERFRDFGLPEWSWAPIAESWRRGDPYVYGRFDLRYDARRPAKLLE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCCHHHHH
YNADTPTSLLEAAIVQWHWLTDTHPGDDQWNSLHEKLVERWGELRKQLPDPQLHFAWSSA
CCCCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
DASGEDNVTTAYMQETAAEAGFDTIALPIEEIGWDVELERFVDLAEAPIEAIFKLYPWEW
CCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCEE
VLDDDFGRKVVASLPETAWIEPLWKALLSNKAILAVLWEMYPGHPNLLPAYLDEPHELTE
EECCCCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHCCCHHHHHH
YIRKPKLGREGANMTIVGAGLETATGGVYGAEGYVYQLLDPLPEFDGMRPVLGAWMVGDT
HHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHEEECCC
SAGLGIRETAGLITDDGAAFVPHRIPTD
CCCCCCHHHCCEEECCCCEECCCCCCCC
>Mature Secondary Structure
MRRVRGTPRPGWQRIIEEQGLVYGSPGRDAHGAPRPYWDESVHYEFDMAEILALEADVEL
CCCCCCCCCHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHH
LHSMCLNAVEHVVLTERFRDFGLPEWSWAPIAESWRRGDPYVYGRFDLRYDARRPAKLLE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCCHHHHH
YNADTPTSLLEAAIVQWHWLTDTHPGDDQWNSLHEKLVERWGELRKQLPDPQLHFAWSSA
CCCCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
DASGEDNVTTAYMQETAAEAGFDTIALPIEEIGWDVELERFVDLAEAPIEAIFKLYPWEW
CCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCEE
VLDDDFGRKVVASLPETAWIEPLWKALLSNKAILAVLWEMYPGHPNLLPAYLDEPHELTE
EECCCCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHCCCHHHHHH
YIRKPKLGREGANMTIVGAGLETATGGVYGAEGYVYQLLDPLPEFDGMRPVLGAWMVGDT
HHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHEEECCC
SAGLGIRETAGLITDDGAAFVPHRIPTD
CCCCCCHHHCCEEECCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]