| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026132
Identifier: 54026132
GI number: 54026132
Start: 4308317
End: 4308631
Strand: Reverse
Name: 54026132
Synonym: nfa41610
Alternate gene names: NA
Gene position: 4308631-4308317 (Counterclockwise)
Preceding gene: 54026133
Following gene: 54026131
Centisome position: 71.56
GC content: 69.52
Gene sequence:
>315_bases ATGGCGATTCAGGTGGTTGCGGCATCGATGATGACCAGCGACGAGACGTCCCATATGGCGCGGTGCGTCGGCGGCGACCT GTGGGTGGTCTCCTGGCTGCCCGGGCGCACGCTCACCGGCAGGCAGGCGGTCACCGCGATGACGATCGCCACCGCCGTCG CCACCCGGGACATGACCGGCCCCGCCGAATGGGCCGGCCTCGACGAGCTCGCGCTCGAACTCGGCCTCACCGGACGCCAG GCCGTCCATCTGGTGCGACTGGAGAATCACGACTATCGCGGCACCGGTGATCCGGCGCGCATCGTGGCCGAATAG
Upstream 100 bases:
>100_bases CGGAATGTTGCAGACCATTTGCTGGAACGCCTCCTCGGTTCCCGCGCGGCCCCTACGATCATCAAGGTCCGGCTGTCGCG AGCACGAGGGGAGCAGGTCG
Downstream 100 bases:
>100_bases CCGCTGCTCGGCGCACCGCGTGCGCGCAGGCCCGGGTGACCCCATTACGCTGGGAGATAATTGACGTCACTCGAGATCAG GAGCGCGATCGGTGTTCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MAIQVVAASMMTSDETSHMARCVGGDLWVVSWLPGRTLTGRQAVTAMTIATAVATRDMTGPAEWAGLDELALELGLTGRQ AVHLVRLENHDYRGTGDPARIVAE
Sequences:
>Translated_104_residues MAIQVVAASMMTSDETSHMARCVGGDLWVVSWLPGRTLTGRQAVTAMTIATAVATRDMTGPAEWAGLDELALELGLTGRQ AVHLVRLENHDYRGTGDPARIVAE >Mature_103_residues AIQVVAASMMTSDETSHMARCVGGDLWVVSWLPGRTLTGRQAVTAMTIATAVATRDMTGPAEWAGLDELALELGLTGRQA VHLVRLENHDYRGTGDPARIVAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11106; Mature: 10975
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIQVVAASMMTSDETSHMARCVGGDLWVVSWLPGRTLTGRQAVTAMTIATAVATRDMTG CEEEEEEHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC PAEWAGLDELALELGLTGRQAVHLVRLENHDYRGTGDPARIVAE CHHHCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEECC >Mature Secondary Structure AIQVVAASMMTSDETSHMARCVGGDLWVVSWLPGRTLTGRQAVTAMTIATAVATRDMTG EEEEEEHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC PAEWAGLDELALELGLTGRQAVHLVRLENHDYRGTGDPARIVAE CHHHCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA