Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026036

Identifier: 54026036

GI number: 54026036

Start: 4213664

End: 4213960

Strand: Reverse

Name: 54026036

Synonym: nfa40660

Alternate gene names: NA

Gene position: 4213960-4213664 (Counterclockwise)

Preceding gene: 54026037

Following gene: 54026035

Centisome position: 69.99

GC content: 67.68

Gene sequence:

>297_bases
GTGTGGGTGTACCTGGGTGCACTGGAGTTCGACATCCTGCTCGGCGACGTGCACTCGTTGAAGGAGAAGCGGTCGGTCAT
CCGGCCGGTGCTCGCCGAGTTGCAGCGCTTCGGGGTGAGTGTGGCCGAGGCCGGGGAACACGACCGGTACCGGCGCACGC
TGCTGGGCGTGGGCATGGTCAGCCCGGACATGAGCCATTTGACGGCCGTGCTCGACAAATGCGAGCGGCACGTCGCGGCG
CGCCCGGAGCTAGAGTTGCTGGCAGTACGCCGCCGCGTCTTCGGACCCGAGGACTAG

Upstream 100 bases:

>100_bases
GAGAAGCCGCGCGACTGACGCCTCGACGACCACCGCGCGGCCGCGCCTGCCCTGGGAGGTGGGCGCGGCCGCGCGGTCCG
GTCGCCGTGAACGGGAAGGT

Downstream 100 bases:

>100_bases
ACGGTTTTTCATCGATAGTGAGGAGGGACAGCCGTGGTGGATCAAGCCAGGGCACGCCGACTCGCGAAGCGGATTTCGGA
GATCGTGGCCACCGCCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MWVYLGALEFDILLGDVHSLKEKRSVIRPVLAELQRFGVSVAEAGEHDRYRRTLLGVGMVSPDMSHLTAVLDKCERHVAA
RPELELLAVRRRVFGPED

Sequences:

>Translated_98_residues
MWVYLGALEFDILLGDVHSLKEKRSVIRPVLAELQRFGVSVAEAGEHDRYRRTLLGVGMVSPDMSHLTAVLDKCERHVAA
RPELELLAVRRRVFGPED
>Mature_98_residues
MWVYLGALEFDILLGDVHSLKEKRSVIRPVLAELQRFGVSVAEAGEHDRYRRTLLGVGMVSPDMSHLTAVLDKCERHVAA
RPELELLAVRRRVFGPED

Specific function: Unknown

COG id: COG1550

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11095; Mature: 11095

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWVYLGALEFDILLGDVHSLKEKRSVIRPVLAELQRFGVSVAEAGEHDRYRRTLLGVGMV
CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCCCC
SPDMSHLTAVLDKCERHVAARPELELLAVRRRVFGPED
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MWVYLGALEFDILLGDVHSLKEKRSVIRPVLAELQRFGVSVAEAGEHDRYRRTLLGVGMV
CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCCCC
SPDMSHLTAVLDKCERHVAARPELELLAVRRRVFGPED
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA