| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026036
Identifier: 54026036
GI number: 54026036
Start: 4213664
End: 4213960
Strand: Reverse
Name: 54026036
Synonym: nfa40660
Alternate gene names: NA
Gene position: 4213960-4213664 (Counterclockwise)
Preceding gene: 54026037
Following gene: 54026035
Centisome position: 69.99
GC content: 67.68
Gene sequence:
>297_bases GTGTGGGTGTACCTGGGTGCACTGGAGTTCGACATCCTGCTCGGCGACGTGCACTCGTTGAAGGAGAAGCGGTCGGTCAT CCGGCCGGTGCTCGCCGAGTTGCAGCGCTTCGGGGTGAGTGTGGCCGAGGCCGGGGAACACGACCGGTACCGGCGCACGC TGCTGGGCGTGGGCATGGTCAGCCCGGACATGAGCCATTTGACGGCCGTGCTCGACAAATGCGAGCGGCACGTCGCGGCG CGCCCGGAGCTAGAGTTGCTGGCAGTACGCCGCCGCGTCTTCGGACCCGAGGACTAG
Upstream 100 bases:
>100_bases GAGAAGCCGCGCGACTGACGCCTCGACGACCACCGCGCGGCCGCGCCTGCCCTGGGAGGTGGGCGCGGCCGCGCGGTCCG GTCGCCGTGAACGGGAAGGT
Downstream 100 bases:
>100_bases ACGGTTTTTCATCGATAGTGAGGAGGGACAGCCGTGGTGGATCAAGCCAGGGCACGCCGACTCGCGAAGCGGATTTCGGA GATCGTGGCCACCGCCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MWVYLGALEFDILLGDVHSLKEKRSVIRPVLAELQRFGVSVAEAGEHDRYRRTLLGVGMVSPDMSHLTAVLDKCERHVAA RPELELLAVRRRVFGPED
Sequences:
>Translated_98_residues MWVYLGALEFDILLGDVHSLKEKRSVIRPVLAELQRFGVSVAEAGEHDRYRRTLLGVGMVSPDMSHLTAVLDKCERHVAA RPELELLAVRRRVFGPED >Mature_98_residues MWVYLGALEFDILLGDVHSLKEKRSVIRPVLAELQRFGVSVAEAGEHDRYRRTLLGVGMVSPDMSHLTAVLDKCERHVAA RPELELLAVRRRVFGPED
Specific function: Unknown
COG id: COG1550
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11095; Mature: 11095
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWVYLGALEFDILLGDVHSLKEKRSVIRPVLAELQRFGVSVAEAGEHDRYRRTLLGVGMV CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCCCC SPDMSHLTAVLDKCERHVAARPELELLAVRRRVFGPED CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MWVYLGALEFDILLGDVHSLKEKRSVIRPVLAELQRFGVSVAEAGEHDRYRRTLLGVGMV CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCCCC SPDMSHLTAVLDKCERHVAARPELELLAVRRRVFGPED CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA