Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026034

Identifier: 54026034

GI number: 54026034

Start: 4212115

End: 4213176

Strand: Reverse

Name: 54026034

Synonym: nfa40640

Alternate gene names: NA

Gene position: 4213176-4212115 (Counterclockwise)

Preceding gene: 54026035

Following gene: 54026033

Centisome position: 69.97

GC content: 75.14

Gene sequence:

>1062_bases
ATGACGACCAGCGGTCCCGGCGTCGGAGCGGATTCCGCTGCGGCGCAAGCCTCTTCGGACGGTTCGCCGGACATGGTCGG
CGCGGCGCTGCGTGCCGCCGTCACCGCGCTGGCGGCGGCGGGCTCGGTCACCGTGGTCAGTCACGTGCAGCCCGACGCCG
ACACCGTCGGCAGCGCGCTGGCACTGGCGACGGTGCTGCGCAGGCGCGGCGTGGCCGTGCGGGCGGCGTTCGCCGAGCCC
GCCGAACTCCCCGCCAGCATGGCGACCCTGCCCGGCGCCGACCTGCTGGTGCCGCCCGCCGAGGTGCCGGACACCGCCGA
TGTGCTCGTCGCGGTGGACTGCGCCAGCGCGAGCCGGATGGGTGCGCTCGCCGACCGGCTCGCGGGCGCGGCGACCACCG
TGGTGATCGATCACCACCGGTCCAACACCCGCTTCGGTGCGATCAACGTCGTCGACCCCGGCGCCGAGTCGACCGCGGGA
CTCGTCGCGCGGTTGCTCGACGTGTGGGGTGAGCCGATCGACGCCCCCGTCGCGCACTGTCTCTACGCGGGGCTGGTCAC
CGACACCGGCTCGTTCCGCTGGGTCCGCCCCGGCACCCACGAGCTGGCCGAACGGCTGCTCGCGACCGGGATCGACGGCC
CCGAGATCGCTCGCACACTGCTCGACACCCACCCCTTCGCCTGGCTGCCGATGCTGGCCAGGGTGCTGTCCACCGCACGC
CTGGAACCGGGCGTGCGCGGCGGGGTCGGGCTCGCGTACGCGTTCGTGCACCGGGCCGATCTCACCGACGTGCGTTCGGA
GGAGGTGGAGAGCGTCATCGACATCGTCCGCACCACCGCCGAGGCGGGCATCGCCGCGGTCTTCAAGGAGTCGCGCGCAC
AGGCGGGCCGGTGGACGGTGTCGCTGCGCTCCCGGGATTCGGGGCCGGGCGCCGACGACGGCGTCGACGTCGCCGCGGTG
GCCACCGCGCTCGGCGGTGGCGGGCACCGGTACGCCGCCGGGTACACCGCCGAGGGCAGCCCCGAGGAGATCGTCGGGGC
GCTGGTGCGGGCGCTCGGGTGA

Upstream 100 bases:

>100_bases
GCGGACGCCGAGGTGGCGCGCGTGGCCGCGGAGGCCAGGCACGCGGGCGAGCCGGACCCGTACAAGACCGATCGCGACGA
CGCAGAGTGACGCGCCGCCG

Downstream 100 bases:

>100_bases
GCGCGGACCCGGCCGCCGCGGGACCCCGGCGCATCCTGGGTCTGGCCCTGCCCACGCTGGGCGTGCTCGTCGCCGAGCCG
CTGTATCTGCTGTTCGATCT

Product: putative phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTTSGPGVGADSAAAQASSDGSPDMVGAALRAAVTALAAAGSVTVVSHVQPDADTVGSALALATVLRRRGVAVRAAFAEP
AELPASMATLPGADLLVPPAEVPDTADVLVAVDCASASRMGALADRLAGAATTVVIDHHRSNTRFGAINVVDPGAESTAG
LVARLLDVWGEPIDAPVAHCLYAGLVTDTGSFRWVRPGTHELAERLLATGIDGPEIARTLLDTHPFAWLPMLARVLSTAR
LEPGVRGGVGLAYAFVHRADLTDVRSEEVESVIDIVRTTAEAGIAAVFKESRAQAGRWTVSLRSRDSGPGADDGVDVAAV
ATALGGGGHRYAAGYTAEGSPEEIVGALVRALG

Sequences:

>Translated_353_residues
MTTSGPGVGADSAAAQASSDGSPDMVGAALRAAVTALAAAGSVTVVSHVQPDADTVGSALALATVLRRRGVAVRAAFAEP
AELPASMATLPGADLLVPPAEVPDTADVLVAVDCASASRMGALADRLAGAATTVVIDHHRSNTRFGAINVVDPGAESTAG
LVARLLDVWGEPIDAPVAHCLYAGLVTDTGSFRWVRPGTHELAERLLATGIDGPEIARTLLDTHPFAWLPMLARVLSTAR
LEPGVRGGVGLAYAFVHRADLTDVRSEEVESVIDIVRTTAEAGIAAVFKESRAQAGRWTVSLRSRDSGPGADDGVDVAAV
ATALGGGGHRYAAGYTAEGSPEEIVGALVRALG
>Mature_352_residues
TTSGPGVGADSAAAQASSDGSPDMVGAALRAAVTALAAAGSVTVVSHVQPDADTVGSALALATVLRRRGVAVRAAFAEPA
ELPASMATLPGADLLVPPAEVPDTADVLVAVDCASASRMGALADRLAGAATTVVIDHHRSNTRFGAINVVDPGAESTAGL
VARLLDVWGEPIDAPVAHCLYAGLVTDTGSFRWVRPGTHELAERLLATGIDGPEIARTLLDTHPFAWLPMLARVLSTARL
EPGVRGGVGLAYAFVHRADLTDVRSEEVESVIDIVRTTAEAGIAAVFKESRAQAGRWTVSLRSRDSGPGADDGVDVAAVA
TALGGGGHRYAAGYTAEGSPEEIVGALVRALG

Specific function: Unknown

COG id: COG0618

COG function: function code R; Exopolyphosphatase-related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mgp1/MG371 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 35784; Mature: 35652

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSGPGVGADSAAAQASSDGSPDMVGAALRAAVTALAAAGSVTVVSHVQPDADTVGSAL
CCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH
ALATVLRRRGVAVRAAFAEPAELPASMATLPGADLLVPPAEVPDTADVLVAVDCASASRM
HHHHHHHHCCCEEEEECCCHHHCCHHHHHCCCCCEECCCCCCCCCCCEEEEEECCCCHHH
GALADRLAGAATTVVIDHHRSNTRFGAINVVDPGAESTAGLVARLLDVWGEPIDAPVAHC
HHHHHHHCCCEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHH
LYAGLVTDTGSFRWVRPGTHELAERLLATGIDGPEIARTLLDTHPFAWLPMLARVLSTAR
HHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
LEPGVRGGVGLAYAFVHRADLTDVRSEEVESVIDIVRTTAEAGIAAVFKESRAQAGRWTV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
SLRSRDSGPGADDGVDVAAVATALGGGGHRYAAGYTAEGSPEEIVGALVRALG
EEECCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TTSGPGVGADSAAAQASSDGSPDMVGAALRAAVTALAAAGSVTVVSHVQPDADTVGSAL
CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH
ALATVLRRRGVAVRAAFAEPAELPASMATLPGADLLVPPAEVPDTADVLVAVDCASASRM
HHHHHHHHCCCEEEEECCCHHHCCHHHHHCCCCCEECCCCCCCCCCCEEEEEECCCCHHH
GALADRLAGAATTVVIDHHRSNTRFGAINVVDPGAESTAGLVARLLDVWGEPIDAPVAHC
HHHHHHHCCCEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHH
LYAGLVTDTGSFRWVRPGTHELAERLLATGIDGPEIARTLLDTHPFAWLPMLARVLSTAR
HHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
LEPGVRGGVGLAYAFVHRADLTDVRSEEVESVIDIVRTTAEAGIAAVFKESRAQAGRWTV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
SLRSRDSGPGADDGVDVAAVATALGGGGHRYAAGYTAEGSPEEIVGALVRALG
EEECCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7569993; 8253680 [H]