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The map label for this gene is 54026031

Identifier: 54026031

GI number: 54026031

Start: 4208728

End: 4209645

Strand: Reverse

Name: 54026031

Synonym: nfa40610

Alternate gene names: NA

Gene position: 4209645-4208728 (Counterclockwise)

Preceding gene: 54026032

Following gene: 54026030

Centisome position: 69.91

GC content: 68.85

Gene sequence:

>918_bases
ATGACGGACAAAGGGTACGACGAACGGCCGTTGACCTTGGCGCCGATCCTCGGCGCCGGATTCGCGCTGTGGCTGGCTCG
CCGCGTGCGCGACCGGGTGCGGCCCCGCACCGGCGGCACCCCCGGCCGGGTGGTACCCGACCACGAGAACCTGGAACTGG
CCGAGGTTTTCGATCGCAAGACGCCGGTGGTGATCCGCGACGTCGCCACCGCGTGGCCGGTGTTCGAGGACTACCAGCCG
CAGCGGCTGCGCGAGAAGTACCGCACCGAGAAGGTCTACGCGCTCACCAGCACCACCAACGTCTTCACCCAGGAGACCTC
GCCGGTGGAACTGCTCGAGTACGGCGACGTGATGGACGCGGTATTCGACACGCCGCGCCCGGACAAGAAGTACTACTCGC
GCGCGGCGGCCAATCCGAAGCCGCTGGCCGAGCAGCTGCCCGCGACCGTCGGCGGGCGCACCCAGAGCACGGCCGCCAGC
AGCGTGTGGATGGGCCAGTCCGGCAACCTGACTCCGCTGCACAACGACCCCTGGCACGGTCTGCTGATCCAGTTGCACGG
GCGCAAGCGGGTGCGGCTGTTCCCGCCGAACGAGTACCACAACGTCTACGGCATCGTCCCGCGCAGGGTGAACGATCCCT
ACACCCGGCTGCCCGACCAGTTCGACCCCGACACCGCCGATTACCCGCGGCTGCGCCGGGCCACCAGCTACGACGTGGTG
CTCGACGCCGGCGACGTGCTCTACATCCCGATGTTCTGGTGGCACCAGGTCGAATCGCTGGACGCCTCGATCTCGTATGT
GGCGCGGTACAACCCGAAGTACTTCGAGTTCATGCGGGCGGCGTTCTTCCCGATGGCGATGCGCGGGCTGCTGCGGATCG
TGGCGGGGGTGACCGGCCGGTTCCGGCGCGCGGCCTGA

Upstream 100 bases:

>100_bases
CATTTCTGGTGTATCGATTCGCGGTGGTGACGCCGATAACGTCAGCAGAGGCCCGCAGCCCGGCCCGGGTGCGGCGCGAC
GTGTCGAAGGGGAGTGGGAG

Downstream 100 bases:

>100_bases
GATCCGCGCACAGCGGTTGTCGATAACGATAATCATCCTTGGCAAGATGGGATGATGCTCGAGCAGTCGACCGTGCGCCG
CGCGCGGTTCCGGGTCTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcription Factor Jumonji; JmjC Domain-Containing Protein; Transcription Factor Jumonji Domain-Containing Protein; JmjC Domain Protein; Transcription Factor Jumonji JmjC; Peptide-Aspartate Beta-Dioxygenase

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTDKGYDERPLTLAPILGAGFALWLARRVRDRVRPRTGGTPGRVVPDHENLELAEVFDRKTPVVIRDVATAWPVFEDYQP
QRLREKYRTEKVYALTSTTNVFTQETSPVELLEYGDVMDAVFDTPRPDKKYYSRAAANPKPLAEQLPATVGGRTQSTAAS
SVWMGQSGNLTPLHNDPWHGLLIQLHGRKRVRLFPPNEYHNVYGIVPRRVNDPYTRLPDQFDPDTADYPRLRRATSYDVV
LDAGDVLYIPMFWWHQVESLDASISYVARYNPKYFEFMRAAFFPMAMRGLLRIVAGVTGRFRRAA

Sequences:

>Translated_305_residues
MTDKGYDERPLTLAPILGAGFALWLARRVRDRVRPRTGGTPGRVVPDHENLELAEVFDRKTPVVIRDVATAWPVFEDYQP
QRLREKYRTEKVYALTSTTNVFTQETSPVELLEYGDVMDAVFDTPRPDKKYYSRAAANPKPLAEQLPATVGGRTQSTAAS
SVWMGQSGNLTPLHNDPWHGLLIQLHGRKRVRLFPPNEYHNVYGIVPRRVNDPYTRLPDQFDPDTADYPRLRRATSYDVV
LDAGDVLYIPMFWWHQVESLDASISYVARYNPKYFEFMRAAFFPMAMRGLLRIVAGVTGRFRRAA
>Mature_304_residues
TDKGYDERPLTLAPILGAGFALWLARRVRDRVRPRTGGTPGRVVPDHENLELAEVFDRKTPVVIRDVATAWPVFEDYQPQ
RLREKYRTEKVYALTSTTNVFTQETSPVELLEYGDVMDAVFDTPRPDKKYYSRAAANPKPLAEQLPATVGGRTQSTAASS
VWMGQSGNLTPLHNDPWHGLLIQLHGRKRVRLFPPNEYHNVYGIVPRRVNDPYTRLPDQFDPDTADYPRLRRATSYDVVL
DAGDVLYIPMFWWHQVESLDASISYVARYNPKYFEFMRAAFFPMAMRGLLRIVAGVTGRFRRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI223942018, Length=216, Percent_Identity=25.462962962963, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI223942014, Length=216, Percent_Identity=25.462962962963, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI148596936, Length=148, Percent_Identity=34.4594594594595, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI21314714, Length=104, Percent_Identity=36.5384615384615, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17557716, Length=108, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281365404, Length=228, Percent_Identity=25.8771929824561, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34920; Mature: 34789

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKGYDERPLTLAPILGAGFALWLARRVRDRVRPRTGGTPGRVVPDHENLELAEVFDRK
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCC
TPVVIRDVATAWPVFEDYQPQRLREKYRTEKVYALTSTTNVFTQETSPVELLEYGDVMDA
CCEEEEHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCEEEECCCCCHHHHHHHHHHHH
VFDTPRPDKKYYSRAAANPKPLAEQLPATVGGRTQSTAASSVWMGQSGNLTPLHNDPWHG
HHCCCCCCHHHHHHHCCCCCCHHHHCCHHCCCCCCCHHHHHEEECCCCCCCCCCCCCCCE
LLIQLHGRKRVRLFPPNEYHNVYGIVPRRVNDPYTRLPDQFDPDTADYPRLRRATSYDVV
EEEEECCCCEEEECCCCCCCCEEEECCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCEEE
LDAGDVLYIPMFWWHQVESLDASISYVARYNPKYFEFMRAAFFPMAMRGLLRIVAGVTGR
EECCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRRAA
HHCCC
>Mature Secondary Structure 
TDKGYDERPLTLAPILGAGFALWLARRVRDRVRPRTGGTPGRVVPDHENLELAEVFDRK
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCC
TPVVIRDVATAWPVFEDYQPQRLREKYRTEKVYALTSTTNVFTQETSPVELLEYGDVMDA
CCEEEEHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCEEEECCCCCHHHHHHHHHHHH
VFDTPRPDKKYYSRAAANPKPLAEQLPATVGGRTQSTAASSVWMGQSGNLTPLHNDPWHG
HHCCCCCCHHHHHHHCCCCCCHHHHCCHHCCCCCCCHHHHHEEECCCCCCCCCCCCCCCE
LLIQLHGRKRVRLFPPNEYHNVYGIVPRRVNDPYTRLPDQFDPDTADYPRLRRATSYDVV
EEEEECCCCEEEECCCCCCCCEEEECCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCEEE
LDAGDVLYIPMFWWHQVESLDASISYVARYNPKYFEFMRAAFFPMAMRGLLRIVAGVTGR
EECCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRRAA
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA