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The map label for this gene is 54026028

Identifier: 54026028

GI number: 54026028

Start: 4206286

End: 4206936

Strand: Reverse

Name: 54026028

Synonym: nfa40580

Alternate gene names: NA

Gene position: 4206936-4206286 (Counterclockwise)

Preceding gene: 54026029

Following gene: 54026027

Centisome position: 69.87

GC content: 78.03

Gene sequence:

>651_bases
GTGGGCGGGCCGGGCACGGCCGGGCCCGCGCGGGCGGGCCGTCGGTTACGGGCGCGGTCGTGCCGGCCGCTCGAGGGTCA
CGTCGTCGGCCGGTGGCGGCGCACGACGACGGCGGCCGGACGCACCGAGCGGTCCTCGACGAGCAGGCCGGGGGAGAGCA
GCGCCTCGACGGTGCGGTCGGCCGCCGGGTCGGCGACGTCGACGACATCGGTGGCCTCCATCGTGCGCGCGTCGAAGGGC
GTGTCCGGTCCGGGCGTGACCAGGGTGGCGCCGCGACCGGTGAGCAGGCGTTCGAGGCGGCCGGCGAGTGCGGTGAAGGC
GGTTCGGTCGCGGTCGGATTCGGCGGTGCGGGCGCAGGTCACGGTATCGCCGTGCAGGGCGAAGAGCTCGGTCAGCAGCG
GCAGGTCGGCGCGATCGCGGCGTGCCCGCGCCCTGGCCTCGTCGGCCATGCGCTCCAGCGTGGCGGCCTGTCGGGCGACC
ACCCGGGCCAGATCCTCCACCCGCTCGGCCAGCGCCGCGAGCGCCGCGGCGGCCGGTTCGGCGGCGCCGGTGGTCTCCTG
CGGTGTCGCGGGGGCGGATTCGCCCTGGTCGGGACTGCTGTCGCGGGGGCGGTCGGCCCGCTGCGCCGGTTCCGTCATGG
GGGCACCATAG

Upstream 100 bases:

>100_bases
AGTGCCCGAAGCGATCCCGAACTCGCGCCGACGCTCGTCGTGCACGGGCACCGACGGATCGAGCGGCCGGAGAACTCCTA
CGAACAGGTGCGCTGAGGTC

Downstream 100 bases:

>100_bases
CCCGGCCGGGCGAATCGGTCCGAGCGGCAGCCGGATTCACCGGCCGATGCGCGCGAGGGTGTCGCGGGGTGCTGCTAGCA
TCACCACGCATGGGGGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MGGPGTAGPARAGRRLRARSCRPLEGHVVGRWRRTTTAAGRTERSSTSRPGESSASTVRSAAGSATSTTSVASIVRASKG
VSGPGVTRVAPRPVSRRSRRPASAVKAVRSRSDSAVRAQVTVSPCRAKSSVSSGRSARSRRARALASSAMRSSVAACRAT
TRARSSTRSASAASAAAAGSAAPVVSCGVAGADSPWSGLLSRGRSARCAGSVMGAP

Sequences:

>Translated_216_residues
MGGPGTAGPARAGRRLRARSCRPLEGHVVGRWRRTTTAAGRTERSSTSRPGESSASTVRSAAGSATSTTSVASIVRASKG
VSGPGVTRVAPRPVSRRSRRPASAVKAVRSRSDSAVRAQVTVSPCRAKSSVSSGRSARSRRARALASSAMRSSVAACRAT
TRARSSTRSASAASAAAAGSAAPVVSCGVAGADSPWSGLLSRGRSARCAGSVMGAP
>Mature_215_residues
GGPGTAGPARAGRRLRARSCRPLEGHVVGRWRRTTTAAGRTERSSTSRPGESSASTVRSAAGSATSTTSVASIVRASKGV
SGPGVTRVAPRPVSRRSRRPASAVKAVRSRSDSAVRAQVTVSPCRAKSSVSSGRSARSRRARALASSAMRSSVAACRATT
RARSSTRSASAASAAAAGSAAPVVSCGVAGADSPWSGLLSRGRSARCAGSVMGAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21617; Mature: 21486

Theoretical pI: Translated: 12.87; Mature: 12.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGPGTAGPARAGRRLRARSCRPLEGHVVGRWRRTTTAAGRTERSSTSRPGESSASTVRS
CCCCCCCCHHHHHHHHHHCCCCCCCCCEEECHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
AAGSATSTTSVASIVRASKGVSGPGVTRVAPRPVSRRSRRPASAVKAVRSRSDSAVRAQV
HCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEEE
TVSPCRAKSSVSSGRSARSRRARALASSAMRSSVAACRATTRARSSTRSASAASAAAAGS
EECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AAPVVSCGVAGADSPWSGLLSRGRSARCAGSVMGAP
CCCHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GGPGTAGPARAGRRLRARSCRPLEGHVVGRWRRTTTAAGRTERSSTSRPGESSASTVRS
CCCCCCCHHHHHHHHHHCCCCCCCCCEEECHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
AAGSATSTTSVASIVRASKGVSGPGVTRVAPRPVSRRSRRPASAVKAVRSRSDSAVRAQV
HCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEEE
TVSPCRAKSSVSSGRSARSRRARALASSAMRSSVAACRATTRARSSTRSASAASAAAAGS
EECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AAPVVSCGVAGADSPWSGLLSRGRSARCAGSVMGAP
CCCHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA