| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54025988
Identifier: 54025988
GI number: 54025988
Start: 4178630
End: 4178830
Strand: Reverse
Name: 54025988
Synonym: nfa40180
Alternate gene names: NA
Gene position: 4178830-4178630 (Counterclockwise)
Preceding gene: 54025989
Following gene: 54025987
Centisome position: 69.4
GC content: 62.69
Gene sequence:
>201_bases GTGACGACCTCGCAACGCCGTGACGACCTCGCAAAGCTGATGGTCGCGGAGATACTGCGCCAGCTCGACGGCGGCGCGAT CAGCATTGGGTCGGGGCACGTGTACATCCCGGCAGACACCTTCGGCGACGGCGACACGATTGACTGCTGTCAACTCGCCG ACGTCGTTTTGGGAGAACTCGGGTTTGCAGTGCGGAGATGA
Upstream 100 bases:
>100_bases TGATCGCGGCGATATGGTCCGACCATCCCGACTACCAGCCTGAGTGGGCCACGAACTTGTGCCGCTTCCTCGCCTGGAAC GAGCCCCACGAGCAAACGCC
Downstream 100 bases:
>100_bases ATGTCGGTGCCCGTCGATAGCATGGCCCTCGCTAGTCGGCAGCAGCCCACCAGCGAACCATGTGCGAGAGGGCAGAGAAG CCCCGATTCGTCCGCGTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MTTSQRRDDLAKLMVAEILRQLDGGAISIGSGHVYIPADTFGDGDTIDCCQLADVVLGELGFAVRR
Sequences:
>Translated_66_residues MTTSQRRDDLAKLMVAEILRQLDGGAISIGSGHVYIPADTFGDGDTIDCCQLADVVLGELGFAVRR >Mature_65_residues TTSQRRDDLAKLMVAEILRQLDGGAISIGSGHVYIPADTFGDGDTIDCCQLADVVLGELGFAVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7053; Mature: 6922
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSQRRDDLAKLMVAEILRQLDGGAISIGSGHVYIPADTFGDGDTIDCCQLADVVLGEL CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHH GFAVRR HHHHCC >Mature Secondary Structure TTSQRRDDLAKLMVAEILRQLDGGAISIGSGHVYIPADTFGDGDTIDCCQLADVVLGEL CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHH GFAVRR HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA