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The map label for this gene is 54025926

Identifier: 54025926

GI number: 54025926

Start: 4151018

End: 4151800

Strand: Reverse

Name: 54025926

Synonym: nfa39560

Alternate gene names: NA

Gene position: 4151800-4151018 (Counterclockwise)

Preceding gene: 54025927

Following gene: 54025925

Centisome position: 68.95

GC content: 64.24

Gene sequence:

>783_bases
GTGAACCCGTTCGAAGCCACACCATCACCGGTCGTTGTGGTCGCTGGCGACTGGCACGCCAACCCCACCTACGCACGGAA
GGCCATCAAACACGCCGCCCGAACCTGCGCCAGCCACATCCTGCACGTCGGAGACTTTGCCTACGACATGCGTGAAAACC
ATGACGGCTCCCCGAACTTCCTCGATCAAGTCCAGGAAGAGCTAGACCGTCATGGCATGCGACTCGGATGGGTCGACGGC
AATCACGATAACCATGAGGTGCTGCAAGCCCTCGTCGCCGAACACGGACACGTCCCCATCCCCATCCGATCCAACATTTT
CTACCTGCCCCGCGGCTACCGATGGACCTGGAACGGAGTCCGCTTCCTCGCGATGGGCGGCGCACACAGTGTTGACCGGC
CCTGGCGTCGCCCACACATCGAATGGTGGCCCGGCGAAACCATCAGCAGCGCCGACGCCCTCCGCGCCTGTGAAGGCGGA
ACCGCCGACATCATGATCTGCCACGACGTACCCGCCGGCGTCCGAATCCCGTGCATCGAAGGCAACCCCTTCCGGTTCCC
GCAAGCCCAGATTGACGCGGCCGAACTCAACCGTCGCGTCCTCCGCGGTGTCGTCGACGTCGTGCAACCGAGGCGCCTGT
TCGCTGGTCACTACCACTGCCGCCTCACCGCGGAACTCCTGGCCGGGAACTATCGCACGCGCGTCGACATCCTCGATGCC
GACCAGGCCGCGGTCGACGCCAACACCACCCTGCTCGACCTCGGGGAGTGTAGGAGACTATAG

Upstream 100 bases:

>100_bases
CCCATGTGGTGCACGGCAGCATCGACGACGACTACCGCGCCGTCGACGCCTACTACATTCGCGAACGCTGGCTCGACCCC
GAACCAAACGACGGAGACAA

Downstream 100 bases:

>100_bases
ACATTACACTCAACTACACGTTACGCTGACGGGGTGAAACTCGCCCCTCCAGCAAACGCGAACTATGCGGCCGTCGTCGT
CCAGATCAGCGCTTTGAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MNPFEATPSPVVVVAGDWHANPTYARKAIKHAARTCASHILHVGDFAYDMRENHDGSPNFLDQVQEELDRHGMRLGWVDG
NHDNHEVLQALVAEHGHVPIPIRSNIFYLPRGYRWTWNGVRFLAMGGAHSVDRPWRRPHIEWWPGETISSADALRACEGG
TADIMICHDVPAGVRIPCIEGNPFRFPQAQIDAAELNRRVLRGVVDVVQPRRLFAGHYHCRLTAELLAGNYRTRVDILDA
DQAAVDANTTLLDLGECRRL

Sequences:

>Translated_260_residues
MNPFEATPSPVVVVAGDWHANPTYARKAIKHAARTCASHILHVGDFAYDMRENHDGSPNFLDQVQEELDRHGMRLGWVDG
NHDNHEVLQALVAEHGHVPIPIRSNIFYLPRGYRWTWNGVRFLAMGGAHSVDRPWRRPHIEWWPGETISSADALRACEGG
TADIMICHDVPAGVRIPCIEGNPFRFPQAQIDAAELNRRVLRGVVDVVQPRRLFAGHYHCRLTAELLAGNYRTRVDILDA
DQAAVDANTTLLDLGECRRL
>Mature_260_residues
MNPFEATPSPVVVVAGDWHANPTYARKAIKHAARTCASHILHVGDFAYDMRENHDGSPNFLDQVQEELDRHGMRLGWVDG
NHDNHEVLQALVAEHGHVPIPIRSNIFYLPRGYRWTWNGVRFLAMGGAHSVDRPWRRPHIEWWPGETISSADALRACEGG
TADIMICHDVPAGVRIPCIEGNPFRFPQAQIDAAELNRRVLRGVVDVVQPRRLFAGHYHCRLTAELLAGNYRTRVDILDA
DQAAVDANTTLLDLGECRRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29224; Mature: 29224

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPFEATPSPVVVVAGDWHANPTYARKAIKHAARTCASHILHVGDFAYDMRENHDGSPNF
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
LDQVQEELDRHGMRLGWVDGNHDNHEVLQALVAEHGHVPIPIRSNIFYLPRGYRWTWNGV
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEECCCEEECCCCCEEEECCE
RFLAMGGAHSVDRPWRRPHIEWWPGETISSADALRACEGGTADIMICHDVPAGVRIPCIE
EEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCEEEEEC
GNPFRFPQAQIDAAELNRRVLRGVVDVVQPRRLFAGHYHCRLTAELLAGNYRTRVDILDA
CCCCCCCHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEHHHHCCCCEEEEEEEEC
DQAAVDANTTLLDLGECRRL
CCHHCCCCCEEEECHHHCCC
>Mature Secondary Structure
MNPFEATPSPVVVVAGDWHANPTYARKAIKHAARTCASHILHVGDFAYDMRENHDGSPNF
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
LDQVQEELDRHGMRLGWVDGNHDNHEVLQALVAEHGHVPIPIRSNIFYLPRGYRWTWNGV
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEECCCEEECCCCCEEEECCE
RFLAMGGAHSVDRPWRRPHIEWWPGETISSADALRACEGGTADIMICHDVPAGVRIPCIE
EEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCEEEEEC
GNPFRFPQAQIDAAELNRRVLRGVVDVVQPRRLFAGHYHCRLTAELLAGNYRTRVDILDA
CCCCCCCHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEHHHHCCCCEEEEEEEEC
DQAAVDANTTLLDLGECRRL
CCHHCCCCCEEEECHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA