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The map label for this gene is 54025923

Identifier: 54025923

GI number: 54025923

Start: 4148485

End: 4149435

Strand: Reverse

Name: 54025923

Synonym: nfa39530

Alternate gene names: NA

Gene position: 4149435-4148485 (Counterclockwise)

Preceding gene: 54025924

Following gene: 54025922

Centisome position: 68.91

GC content: 65.62

Gene sequence:

>951_bases
ATGATCGGCGAAAAGCTGGTGCTGAGAACTGGTGTGCGTCCGCGCGTCATCCTGCCGAGAGGCTATCCCGGCAGTGGCAA
GAGCACCTTGTACACGCGCCTGAAGGAGGCCGATCCCCTATTGGCGCGTGTGTCACGTGACGACGCGCGGATGGCGCTGT
TCGGTCAGTCAGGAATGCTCACACCGCAGCAGGAAGAGATCATCTCGAAAGCCGAGCGTGCGCAGGCCGCGGCACTGCTC
GACGCAGGCTATGACGTCTACGTCGACGCCACGAATCTACGCCTCAAGTGGGCGCGCGGTTGGGCCGACTTCGCTGCCCT
GCACGGCGCTGAATTCCAGGTGATCGACCTCGACACCCCGGTCGACGAGTGCATCCGCCGTGACGCGGAACGTGCCGCAG
CGGGCGGGCGGGCGGTGGGGAAGGTCGCGATCGAGGCCCTTGCGAAGCGGTTCCCGCGCAGGCACTGGCCGACGATCACC
GCCTCCCCGGACCTGTTCTTCTACCCGACGCCGTACGTGCCCGACGAGACGCTGCCGCCAGCGTGGATCGTCGACGTGGA
TGGCACTCTGGCGGACAAGGCTCCAGGTCGTGGCATCTACGACTACACGCGCGTGTTCGAGGACATCCCGATCGCGCACA
CCGTCGAGGTGGTGAGGAAGCTCGCGGCGGACGCTGCGATCGTCATCCTGTCCGGCCGCGACGACGATTCACGCACGGTT
ACTGCGGACTGGCTGACCGCGAACGGTGTCCCGTTCACGGAATTGCGTATGCGGGCGACCGGCGACAAACGACCCGATTA
CCTGGTCAAGTACGGCATCTTCGACCAGCAGATCCGCGACCGCTACAGGGTGCTCGGGGTTTTCGACGATCGGCTGTCGG
TCTGCCGGATGTGGGATCGGCTCGGTGTCCCGTTGATGCGGCTCGGCCGCCCCGACCAGGACGACTTCTGA

Upstream 100 bases:

>100_bases
ATATTCTGCGTCATGGCGATTATGTAAAGGTGCGGATGCGGAGCCGCAACCGTCGGACGTACATCAAGTTCCGGTTCGAC
CGTCACGAGTTGATCCCGTC

Downstream 100 bases:

>100_bases
TGTACAAGTCGCTGGGTGTCCCGTTCGTCGGCTGGTTGTCTGTGTCGAGCACCTACGAGCCGCCGCGTTGGGCTGTGGAG
ACGGGTCGTGGCCGTACGCG

Product: putative phage polynucleotide kinase

Products: NA

Alternate protein names: Polynucleotide Kinase; Phage Protein; Polynucleotide 5-Hydroxyl-Kinase

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MIGEKLVLRTGVRPRVILPRGYPGSGKSTLYTRLKEADPLLARVSRDDARMALFGQSGMLTPQQEEIISKAERAQAAALL
DAGYDVYVDATNLRLKWARGWADFAALHGAEFQVIDLDTPVDECIRRDAERAAAGGRAVGKVAIEALAKRFPRRHWPTIT
ASPDLFFYPTPYVPDETLPPAWIVDVDGTLADKAPGRGIYDYTRVFEDIPIAHTVEVVRKLAADAAIVILSGRDDDSRTV
TADWLTANGVPFTELRMRATGDKRPDYLVKYGIFDQQIRDRYRVLGVFDDRLSVCRMWDRLGVPLMRLGRPDQDDF

Sequences:

>Translated_316_residues
MIGEKLVLRTGVRPRVILPRGYPGSGKSTLYTRLKEADPLLARVSRDDARMALFGQSGMLTPQQEEIISKAERAQAAALL
DAGYDVYVDATNLRLKWARGWADFAALHGAEFQVIDLDTPVDECIRRDAERAAAGGRAVGKVAIEALAKRFPRRHWPTIT
ASPDLFFYPTPYVPDETLPPAWIVDVDGTLADKAPGRGIYDYTRVFEDIPIAHTVEVVRKLAADAAIVILSGRDDDSRTV
TADWLTANGVPFTELRMRATGDKRPDYLVKYGIFDQQIRDRYRVLGVFDDRLSVCRMWDRLGVPLMRLGRPDQDDF
>Mature_316_residues
MIGEKLVLRTGVRPRVILPRGYPGSGKSTLYTRLKEADPLLARVSRDDARMALFGQSGMLTPQQEEIISKAERAQAAALL
DAGYDVYVDATNLRLKWARGWADFAALHGAEFQVIDLDTPVDECIRRDAERAAAGGRAVGKVAIEALAKRFPRRHWPTIT
ASPDLFFYPTPYVPDETLPPAWIVDVDGTLADKAPGRGIYDYTRVFEDIPIAHTVEVVRKLAADAAIVILSGRDDDSRTV
TADWLTANGVPFTELRMRATGDKRPDYLVKYGIFDQQIRDRYRVLGVFDDRLSVCRMWDRLGVPLMRLGRPDQDDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35392; Mature: 35392

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGEKLVLRTGVRPRVILPRGYPGSGKSTLYTRLKEADPLLARVSRDDARMALFGQSGML
CCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHHCCCCCEEEEECCCCCC
TPQQEEIISKAERAQAAALLDAGYDVYVDATNLRLKWARGWADFAALHGAEFQVIDLDTP
CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCHHHHHHHCCCCEEEEECCCC
VDECIRRDAERAAAGGRAVGKVAIEALAKRFPRRHWPTITASPDLFFYPTPYVPDETLPP
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCEEECCCCEEECCCCCCCCCCCCC
AWIVDVDGTLADKAPGRGIYDYTRVFEDIPIAHTVEVVRKLAADAAIVILSGRDDDSRTV
EEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEE
TADWLTANGVPFTELRMRATGDKRPDYLVKYGIFDQQIRDRYRVLGVFDDRLSVCRMWDR
EEEEEECCCCCHHHEEEECCCCCCCCEEEEECCHHHHHHHHHHEEEEHHHHHHHHHHHHH
LGVPLMRLGRPDQDDF
HCCCHHHCCCCCCCCC
>Mature Secondary Structure
MIGEKLVLRTGVRPRVILPRGYPGSGKSTLYTRLKEADPLLARVSRDDARMALFGQSGML
CCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHHCCCCCEEEEECCCCCC
TPQQEEIISKAERAQAAALLDAGYDVYVDATNLRLKWARGWADFAALHGAEFQVIDLDTP
CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCHHHHHHHCCCCEEEEECCCC
VDECIRRDAERAAAGGRAVGKVAIEALAKRFPRRHWPTITASPDLFFYPTPYVPDETLPP
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCEEECCCCEEECCCCCCCCCCCCC
AWIVDVDGTLADKAPGRGIYDYTRVFEDIPIAHTVEVVRKLAADAAIVILSGRDDDSRTV
EEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEE
TADWLTANGVPFTELRMRATGDKRPDYLVKYGIFDQQIRDRYRVLGVFDDRLSVCRMWDR
EEEEEECCCCCHHHEEEECCCCCCCCEEEEECCHHHHHHHHHHEEEEHHHHHHHHHHHHH
LGVPLMRLGRPDQDDF
HCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA