| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54025919
Identifier: 54025919
GI number: 54025919
Start: 4146320
End: 4146586
Strand: Reverse
Name: 54025919
Synonym: nfa39490
Alternate gene names: NA
Gene position: 4146586-4146320 (Counterclockwise)
Preceding gene: 54025920
Following gene: 54025918
Centisome position: 68.87
GC content: 63.67
Gene sequence:
>267_bases ATGACCGCGACAACCTGTCCTGATTGCGGTGCCCTGCTCGGTGAATCCACAGCAGAGCGGATGGCGATCCACAGGCTGTG GAAACACCCCACCACCGAGGACGAACGGCAAGTCCGTGCCGACATCACCTCCACCGCAGCAGATTTCGAGTCCGCCCACG CACACGGTGACGAGTTCGGTGCCCGCCTCCACCTCGACCGCCTGCGCCAGCTCGTACTCCGCGCCATGACCTACCTCGAC GACCGAATGGAATCAGCCGCCCAATGA
Upstream 100 bases:
>100_bases CTCAGTACCACCCGTCTGTGCAATGGCGCGTCGGAAAGAAGCGCGCCGGGCGCGAGCTCGACGGCCGCACCTGGGACGAG TTCCCGGTTCGGGTCTCGGC
Downstream 100 bases:
>100_bases CCTTCTGGACCGACGTCGCCGACTGGAACCACACCGCAGGCGTACCTCTACGCCCCACTCCCGGATGGGTCAACCAGGCC GAGCTCGACCTGGCCTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MTATTCPDCGALLGESTAERMAIHRLWKHPTTEDERQVRADITSTAADFESAHAHGDEFGARLHLDRLRQLVLRAMTYLD DRMESAAQ
Sequences:
>Translated_88_residues MTATTCPDCGALLGESTAERMAIHRLWKHPTTEDERQVRADITSTAADFESAHAHGDEFGARLHLDRLRQLVLRAMTYLD DRMESAAQ >Mature_87_residues TATTCPDCGALLGESTAERMAIHRLWKHPTTEDERQVRADITSTAADFESAHAHGDEFGARLHLDRLRQLVLRAMTYLDD RMESAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9869; Mature: 9738
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATTCPDCGALLGESTAERMAIHRLWKHPTTEDERQVRADITSTAADFESAHAHGDEFG CCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH ARLHLDRLRQLVLRAMTYLDDRMESAAQ HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TATTCPDCGALLGESTAERMAIHRLWKHPTTEDERQVRADITSTAADFESAHAHGDEFG CCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH ARLHLDRLRQLVLRAMTYLDDRMESAAQ HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA