| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54025891
Identifier: 54025891
GI number: 54025891
Start: 4126974
End: 4127342
Strand: Reverse
Name: 54025891
Synonym: nfa39210
Alternate gene names: NA
Gene position: 4127342-4126974 (Counterclockwise)
Preceding gene: 54025892
Following gene: 54025890
Centisome position: 68.55
GC content: 66.12
Gene sequence:
>369_bases ATGGTGAACTACCGTCACCCCGCCTACCCGGGCGGAACCATCCTCACTGTGCTGCGAGGCGCCGCCCATAACTGGGAAGG CGACCCCGCCAGTCCCGCCGTCGACGAACACCAGATCGGGCCGTGCGACCTCAAATGGTCCACCGACAGCGAGGACAACA GCAAGGGCGAGCAGCTGATGCTGTCCGCGCGGGTGACTGCGCCCCACGGCGCCGACGTCTTGGCCTCCGACCGGATTCGC CTACCGGACGGGAGAGAGTTCGTCATCGACGGGCAGGTGCGAGAAACCCCGAATCCCTTCACCGGCTGGTCCACCGGCGT CCGATTCACCATCGCAAAGGACGGCAGCAGTGGAGTACGACGGCAGTGA
Upstream 100 bases:
>100_bases CCGTCGACGCCGCCGACATCGCCCGCTCTCTCACCCGCTTGAGCGACGCTGCCGTGCAGATTCTTCGGGCCGCCGGGCTC GCATCGACGAGGCCATACAA
Downstream 100 bases:
>100_bases CTTCGACCTCGACACCACATTCCTGCGCGAGTCGCCTGAGCTGACCGAGTTCGTTCACGAGATCGCCGAGCAAGGCGCTG ATCGGTGGGCGGCGCGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MVNYRHPAYPGGTILTVLRGAAHNWEGDPASPAVDEHQIGPCDLKWSTDSEDNSKGEQLMLSARVTAPHGADVLASDRIR LPDGREFVIDGQVRETPNPFTGWSTGVRFTIAKDGSSGVRRQ
Sequences:
>Translated_122_residues MVNYRHPAYPGGTILTVLRGAAHNWEGDPASPAVDEHQIGPCDLKWSTDSEDNSKGEQLMLSARVTAPHGADVLASDRIR LPDGREFVIDGQVRETPNPFTGWSTGVRFTIAKDGSSGVRRQ >Mature_122_residues MVNYRHPAYPGGTILTVLRGAAHNWEGDPASPAVDEHQIGPCDLKWSTDSEDNSKGEQLMLSARVTAPHGADVLASDRIR LPDGREFVIDGQVRETPNPFTGWSTGVRFTIAKDGSSGVRRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13269; Mature: 13269
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNYRHPAYPGGTILTVLRGAAHNWEGDPASPAVDEHQIGPCDLKWSTDSEDNSKGEQLM CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEE LSARVTAPHGADVLASDRIRLPDGREFVIDGQVRETPNPFTGWSTGVRFTIAKDGSSGVR EEEEECCCCCCCEECCCCEECCCCCEEEECCEECCCCCCCCCCCCCEEEEEEECCCCCCC RQ CC >Mature Secondary Structure MVNYRHPAYPGGTILTVLRGAAHNWEGDPASPAVDEHQIGPCDLKWSTDSEDNSKGEQLM CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEE LSARVTAPHGADVLASDRIRLPDGREFVIDGQVRETPNPFTGWSTGVRFTIAKDGSSGVR EEEEECCCCCCCEECCCCEECCCCCEEEECCEECCCCCCCCCCCCCEEEEEEECCCCCCC RQ CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA