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The map label for this gene is yidY [C]

Identifier: 54025853

GI number: 54025853

Start: 4096211

End: 4097434

Strand: Reverse

Name: yidY [C]

Synonym: nfa38830

Alternate gene names: 54025853

Gene position: 4097434-4096211 (Counterclockwise)

Preceding gene: 54025855

Following gene: 54025852

Centisome position: 68.05

GC content: 72.22

Gene sequence:

>1224_bases
ATGACAGCGACGACGGTGACGGTCGGCGAAGGCCGGTCCGTCCAGCGGTGGGCGTACGCACTGGTGCTGGCCGCCAGCGG
GGTGGCGCTCGGGGTGTCCGGCGTGCCCGCCCCGCTGTACGGGATCTACGAGCAGCAATGGCAGCTGTCGCCGTTCACCA
CGACCGTGGTGTTCGCGGTGTACGCGGTGGCGGCCTTGGCGGCGGTGCTGGTGTCGGGCCGCATCTCCGATGTGGTGGGA
CGCAAGCCGGTGCTGCTGGGCGCCTTCGGCATCATGATCGCCGGGCTGGTGGTCTTCGTACTGGCCGATTCGGTGCCGAT
GTTGTTGCTGGCCAGGGCATTACACGGTCTCGCGGTCGGCTCGACGGTGGTCGCGGGTGCGGCGGCGCTGCTGGATCTGC
GCCCGCACCGCGGCGCGCGGTCCGGGCAGTTGAGCGGTGTCGCCTTCAACGTCGGGATGGCGGTGGCGATCCTGGGTTCG
GCGGTGCTGGCCCAATACGCCCCGCATCCGCTGCGCACCCCCTATGTCGCCATCACCGTGGTGTGCCTCGCGGTCGCGGC
CGGGGTCCTGGTGCTGCGGGAGCCGCACGGCCAGCGGGTCGCCGGTCGTATCCGGATCGCGAGACCCGCGGTGCCGCAGG
AGATCCGCGCCGACTTCTGGTTCTCGGCGATCGGCGTGATGGCGGCCTGGTCGGTGCTCGGCGTGCTGCTGTCGCTGTAC
CCATCGCTGGCCGCCCAGCAGACCGGCATCCACAATCTGGTCTTCGGCGGCGCGGTGGTCGCCACCACCGCCCTGTCCGG
TGCGACGGCCCAGCTGTTCGCCACCGGCATCCCGGCCCGGCGCGCGGCCATCGTCGGCGACACCGGCATGGCGATCGCGC
TGCTGCTGACGGTGCCCGCGCTGGCCACCCACAACTGGGTCGCGGTGCTCGGGGCGGGCCTGGCGCTGGGCGCGACGTTC
GGGCTCGGATTCGGCGGGTCGCTGCGGCACCTGTCGGAGGTGGTGCCGCAGCACAAGCGCGGGGAGACCATGTCGGCCTA
CTACCTGCTCGCCTATTCGGCGATGGCGTTGCCGACGGTCGCGGCCGGGTGGGCGGCGACCACCTGGGGGCTCGGCACGG
TGTTCCCGTGGTTCGTCGGACTGGTCGCGGTGGCGTGCCTGGTCGCGGCCGGACTGGGAGTGCGGCGCAACCGGATCGAT
CGGGAACGCCTCGACGTGGCCTGA

Upstream 100 bases:

>100_bases
GCGTCGGTCATGAGCTACCTCACCGATGGGTTTGACAACCATCGAACCGGTTGTAGTGTCGTGTTCGATCAACATCAAAC
TTACCTGATGGGGAGCATCG

Downstream 100 bases:

>100_bases
GCACACCCGGTGGTGTCCGGCCGCGGGACCGATTCGGCGGGGGCGATGCCCGCCCGCCGGGCCGGGCGGTAGCGTCGGGG
GAATGAGGATTCGTGGGGCG

Product: putative transporter

Products: Proton [Cytoplasm]; drug [Periplasm] [C]

Alternate protein names: Facilitator Superfamily Transporter; Drug Efflux Protein; Multi-Drug Efflux Transporter; Multidrug Resistance Protein; Facilitator Superfamily Transporter Permease; Mutlidrug Resistance Protein; Arabinose Efflux Permease Family Protein; ABC Transporter Membrane Protein; Transmembrane Efflux Protein; MFS Transporter; Facilitator Superfamily Multidrug Resistance Protein; Drug Resistance Efflux Protein; Facilitator Family Protein; Multidrug-Efflux MFS Permease

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MTATTVTVGEGRSVQRWAYALVLAASGVALGVSGVPAPLYGIYEQQWQLSPFTTTVVFAVYAVAALAAVLVSGRISDVVG
RKPVLLGAFGIMIAGLVVFVLADSVPMLLLARALHGLAVGSTVVAGAAALLDLRPHRGARSGQLSGVAFNVGMAVAILGS
AVLAQYAPHPLRTPYVAITVVCLAVAAGVLVLREPHGQRVAGRIRIARPAVPQEIRADFWFSAIGVMAAWSVLGVLLSLY
PSLAAQQTGIHNLVFGGAVVATTALSGATAQLFATGIPARRAAIVGDTGMAIALLLTVPALATHNWVAVLGAGLALGATF
GLGFGGSLRHLSEVVPQHKRGETMSAYYLLAYSAMALPTVAAGWAATTWGLGTVFPWFVGLVAVACLVAAGLGVRRNRID
RERLDVA

Sequences:

>Translated_407_residues
MTATTVTVGEGRSVQRWAYALVLAASGVALGVSGVPAPLYGIYEQQWQLSPFTTTVVFAVYAVAALAAVLVSGRISDVVG
RKPVLLGAFGIMIAGLVVFVLADSVPMLLLARALHGLAVGSTVVAGAAALLDLRPHRGARSGQLSGVAFNVGMAVAILGS
AVLAQYAPHPLRTPYVAITVVCLAVAAGVLVLREPHGQRVAGRIRIARPAVPQEIRADFWFSAIGVMAAWSVLGVLLSLY
PSLAAQQTGIHNLVFGGAVVATTALSGATAQLFATGIPARRAAIVGDTGMAIALLLTVPALATHNWVAVLGAGLALGATF
GLGFGGSLRHLSEVVPQHKRGETMSAYYLLAYSAMALPTVAAGWAATTWGLGTVFPWFVGLVAVACLVAAGLGVRRNRID
RERLDVA
>Mature_406_residues
TATTVTVGEGRSVQRWAYALVLAASGVALGVSGVPAPLYGIYEQQWQLSPFTTTVVFAVYAVAALAAVLVSGRISDVVGR
KPVLLGAFGIMIAGLVVFVLADSVPMLLLARALHGLAVGSTVVAGAAALLDLRPHRGARSGQLSGVAFNVGMAVAILGSA
VLAQYAPHPLRTPYVAITVVCLAVAAGVLVLREPHGQRVAGRIRIARPAVPQEIRADFWFSAIGVMAAWSVLGVLLSLYP
SLAAQQTGIHNLVFGGAVVATTALSGATAQLFATGIPARRAAIVGDTGMAIALLLTVPALATHNWVAVLGAGLALGATFG
LGFGGSLRHLSEVVPQHKRGETMSAYYLLAYSAMALPTVAAGWAATTWGLGTVFPWFVGLVAVACLVAAGLGVRRNRIDR
ERLDVA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41821; Mature: 41690

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATTVTVGEGRSVQRWAYALVLAASGVALGVSGVPAPLYGIYEQQWQLSPFTTTVVFAV
CCCEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHH
YAVAALAAVLVSGRISDVVGRKPVLLGAFGIMIAGLVVFVLADSVPMLLLARALHGLAVG
HHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
STVVAGAAALLDLRPHRGARSGQLSGVAFNVGMAVAILGSAVLAQYAPHPLRTPYVAITV
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
VCLAVAAGVLVLREPHGQRVAGRIRIARPAVPQEIRADFWFSAIGVMAAWSVLGVLLSLY
HHHHHHHCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PSLAAQQTGIHNLVFGGAVVATTALSGATAQLFATGIPARRAAIVGDTGMAIALLLTVPA
HHHHHHHCCCHHHHHCCHHHHHHHCCCCHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHH
LATHNWVAVLGAGLALGATFGLGFGGSLRHLSEVVPQHKRGETMSAYYLLAYSAMALPTV
HHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
AAGWAATTWGLGTVFPWFVGLVAVACLVAAGLGVRRNRIDRERLDVA
HCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCC
>Mature Secondary Structure 
TATTVTVGEGRSVQRWAYALVLAASGVALGVSGVPAPLYGIYEQQWQLSPFTTTVVFAV
CCEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHH
YAVAALAAVLVSGRISDVVGRKPVLLGAFGIMIAGLVVFVLADSVPMLLLARALHGLAVG
HHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
STVVAGAAALLDLRPHRGARSGQLSGVAFNVGMAVAILGSAVLAQYAPHPLRTPYVAITV
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
VCLAVAAGVLVLREPHGQRVAGRIRIARPAVPQEIRADFWFSAIGVMAAWSVLGVLLSLY
HHHHHHHCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PSLAAQQTGIHNLVFGGAVVATTALSGATAQLFATGIPARRAAIVGDTGMAIALLLTVPA
HHHHHHHCCCHHHHHCCHHHHHHHCCCCHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHH
LATHNWVAVLGAGLALGATFGLGFGGSLRHLSEVVPQHKRGETMSAYYLLAYSAMALPTV
HHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
AAGWAATTWGLGTVFPWFVGLVAVACLVAAGLGVRRNRIDRERLDVA
HCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA