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The map label for this gene is 54025782

Identifier: 54025782

GI number: 54025782

Start: 4033203

End: 4034042

Strand: Reverse

Name: 54025782

Synonym: nfa38120

Alternate gene names: NA

Gene position: 4034042-4033203 (Counterclockwise)

Preceding gene: 54025784

Following gene: 54025780

Centisome position: 67.0

GC content: 75.6

Gene sequence:

>840_bases
GTGCGGCGCGACGTCGAGCGGCTGCGGGCCCTCGGCTATCCGGTGCAGGCGACCGCCGGTGTCGGCGGCGGCTACCGGCT
GGGCGCGGGCACCCGGCTGCCGCCGTTGCTGTTCGACGACGAGGAGGCCATCGCCACGGCGGTCTCGCTGCGCATGGCCT
CGGGCGGGACGGTTGCCGGGACGGGTGAGGCGGCGTTACGGGCGCTGGCCAAACTCGATCAGGTGATGCCGCCCCGGCTG
CGCACGGAGGTGCGGGCGGTGCACGGCGCCACCGACACCCTCGTCGGGCCCGGCGCCGAAGTCGACGCCGACGTCCTGGT
GCGCCTGGCACACGCCTGCCGCGACGCCGTCCGGGTGCGGTTCCGGTACGCCGGTCGCGGCGCCGCCGACACCGAGCGCA
CCGTCGAACCGGTGCGGATGGTCGCCACCAGCCACCGCTGGTATCTGATGGCCTGGGACGTCGACCGGGCCGACTGGCGG
ACCTTCCGACTGGACCGGATGCGCGACCTCGTCACCACCACCTGGCGTTTCCGCCCGAGGGAGCACCCGGACCCGGTCGA
CTACGTGCAGCGATCGATGACCGAGGCGCCCTACCCGCACCTGGCTCGCATCCGGCTGCACGCCCCCGCCCGGCGCATCC
GCGAGCTGGTGCCGCCGCAGGTCGGCCGGATCGAGGACGACGGCGACGGCCGCTGCCTCCTGATCGTCGGCGGCATGGAC
CTGGACTGGCTCGCGGTGCACGTCGCGCGGCTCGGCGTCGACGCCGACGTGCTCGAGCCACCCGAACTCCGCGCCGCCGC
CGCCCGCTTGGCCCGGCGCCTGGCGCGGATGGGCGGCTGA

Upstream 100 bases:

>100_bases
ACCACCGAGCGGGTGCTGCGGCTGCTCGCGCTGTTGCAGCGCAGGCCGTCGTGGACGGCGGCCGAGCTGGCCGCCGAACT
CCGCGTCACCGATCGCTCGG

Downstream 100 bases:

>100_bases
GTATCGCGGGCCCGGGGGTCTCGGCGATCGCGGAGAGGGGCTCGGCGGCTGCTAGATTCGAGGGCGTGCGGCTCGCCGAT
GGATCGCTCCTGCGTGCATG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: DeoR Family Transcriptional Regulator; DeoR-Family Transcriptional Regulator; Transcriptional Regulator; HTH Type; Repressor; Deor Family Transcriptional Regulator; Transcriptional Repressor; Transcription Repressor; DeoR-Family Protein Transcriptional Regulator; Helix-Turn-Helix Family Protein; HTH Domain Family; LOW QUALITY PROTEIN Transcriptional Regulator

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MRRDVERLRALGYPVQATAGVGGGYRLGAGTRLPPLLFDDEEAIATAVSLRMASGGTVAGTGEAALRALAKLDQVMPPRL
RTEVRAVHGATDTLVGPGAEVDADVLVRLAHACRDAVRVRFRYAGRGAADTERTVEPVRMVATSHRWYLMAWDVDRADWR
TFRLDRMRDLVTTTWRFRPREHPDPVDYVQRSMTEAPYPHLARIRLHAPARRIRELVPPQVGRIEDDGDGRCLLIVGGMD
LDWLAVHVARLGVDADVLEPPELRAAAARLARRLARMGG

Sequences:

>Translated_279_residues
MRRDVERLRALGYPVQATAGVGGGYRLGAGTRLPPLLFDDEEAIATAVSLRMASGGTVAGTGEAALRALAKLDQVMPPRL
RTEVRAVHGATDTLVGPGAEVDADVLVRLAHACRDAVRVRFRYAGRGAADTERTVEPVRMVATSHRWYLMAWDVDRADWR
TFRLDRMRDLVTTTWRFRPREHPDPVDYVQRSMTEAPYPHLARIRLHAPARRIRELVPPQVGRIEDDGDGRCLLIVGGMD
LDWLAVHVARLGVDADVLEPPELRAAAARLARRLARMGG
>Mature_279_residues
MRRDVERLRALGYPVQATAGVGGGYRLGAGTRLPPLLFDDEEAIATAVSLRMASGGTVAGTGEAALRALAKLDQVMPPRL
RTEVRAVHGATDTLVGPGAEVDADVLVRLAHACRDAVRVRFRYAGRGAADTERTVEPVRMVATSHRWYLMAWDVDRADWR
TFRLDRMRDLVTTTWRFRPREHPDPVDYVQRSMTEAPYPHLARIRLHAPARRIRELVPPQVGRIEDDGDGRCLLIVGGMD
LDWLAVHVARLGVDADVLEPPELRAAAARLARRLARMGG

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30901; Mature: 30901

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRDVERLRALGYPVQATAGVGGGYRLGAGTRLPPLLFDDEEAIATAVSLRMASGGTVAG
CCHHHHHHHHCCCCCEECCCCCCCEEECCCCCCCCCEECCHHHHHHHHHHHCCCCCCCCC
TGEAALRALAKLDQVMPPRLRTEVRAVHGATDTLVGPGAEVDADVLVRLAHACRDAVRVR
CHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FRYAGRGAADTERTVEPVRMVATSHRWYLMAWDVDRADWRTFRLDRMRDLVTTTWRFRPR
HHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC
EHPDPVDYVQRSMTEAPYPHLARIRLHAPARRIRELVPPQVGRIEDDGDGRCLLIVGGMD
CCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC
LDWLAVHVARLGVDADVLEPPELRAAAARLARRLARMGG
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRDVERLRALGYPVQATAGVGGGYRLGAGTRLPPLLFDDEEAIATAVSLRMASGGTVAG
CCHHHHHHHHCCCCCEECCCCCCCEEECCCCCCCCCEECCHHHHHHHHHHHCCCCCCCCC
TGEAALRALAKLDQVMPPRLRTEVRAVHGATDTLVGPGAEVDADVLVRLAHACRDAVRVR
CHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FRYAGRGAADTERTVEPVRMVATSHRWYLMAWDVDRADWRTFRLDRMRDLVTTTWRFRPR
HHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC
EHPDPVDYVQRSMTEAPYPHLARIRLHAPARRIRELVPPQVGRIEDDGDGRCLLIVGGMD
CCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC
LDWLAVHVARLGVDADVLEPPELRAAAARLARRLARMGG
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA