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The map label for this gene is ohrR [H]

Identifier: 54025779

GI number: 54025779

Start: 4031013

End: 4031501

Strand: Reverse

Name: ohrR [H]

Synonym: nfa38090

Alternate gene names: 54025779

Gene position: 4031501-4031013 (Counterclockwise)

Preceding gene: 54025780

Following gene: 54025778

Centisome position: 66.95

GC content: 71.37

Gene sequence:

>489_bases
GTGGCGGCGCTGGAAGGAGGCTCCGTGGAGATCGATGACCCCCTGCGATTGGACCGGCAGGTGTGCTTCGCCCTCGCCGT
CGCCAACCGCTCGGTGCTGGCGGTCTACCGCCCACTGCTCGAACCGCTCGGTCTCACCCACCCGCAGTACCTGGTGATGC
TGGCGCTGTGGGAGCGTGCCCCGATGTCGGTCAAGGCCATCGCCGAGGCCATCCAGCTCGACTCGCCCACGCTGTCCCCG
CTGCTCAAGCGGCTGGAGGCGGCCGGGCTGATCACCAGGGAGCGCGACCCGCGCGACGAACGCAACCTCCAGGTGAACCT
CACCGAGGCGGGCGCCGCGCTGCGTGCGAAGGCCGAGCGCATCCCGCCCGCCGTGGTGGAGAGCCTCGGCGTCACCATCG
CCGACCTCGAGGAGCTGCGCGAGGTGCTCACCCGCGTCAACGAGGCGGCCCGCCGCTCGCTGTCCACCACCCGAGGAGTC
TCCGCATGA

Upstream 100 bases:

>100_bases
GGCCGGTCTGCGCGGTACCCCTGATGTATGGCGACCGGGTCGAGACGCCGCGAATGGTTAGCGCATTAACTGATAGTGTG
TAAACGAAAGGCCGCGCTGG

Downstream 100 bases:

>100_bases
AGCGCCCCAATCCCGTCCAGTGGATCGGCTACTCCCTCGGCCGCCGCCTACCCGACGACCTGCAGGACTGGGTCCGCCAC
GACCTCACCGGCAGGCACGC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MAALEGGSVEIDDPLRLDRQVCFALAVANRSVLAVYRPLLEPLGLTHPQYLVMLALWERAPMSVKAIAEAIQLDSPTLSP
LLKRLEAAGLITRERDPRDERNLQVNLTEAGAALRAKAERIPPAVVESLGVTIADLEELREVLTRVNEAARRSLSTTRGV
SA

Sequences:

>Translated_162_residues
MAALEGGSVEIDDPLRLDRQVCFALAVANRSVLAVYRPLLEPLGLTHPQYLVMLALWERAPMSVKAIAEAIQLDSPTLSP
LLKRLEAAGLITRERDPRDERNLQVNLTEAGAALRAKAERIPPAVVESLGVTIADLEELREVLTRVNEAARRSLSTTRGV
SA
>Mature_161_residues
AALEGGSVEIDDPLRLDRQVCFALAVANRSVLAVYRPLLEPLGLTHPQYLVMLALWERAPMSVKAIAEAIQLDSPTLSPL
LKRLEAAGLITRERDPRDERNLQVNLTEAGAALRAKAERIPPAVVESLGVTIADLEELREVLTRVNEAARRSLSTTRGVS
A

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17670; Mature: 17539

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALEGGSVEIDDPLRLDRQVCFALAVANRSVLAVYRPLLEPLGLTHPQYLVMLALWERA
CCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PMSVKAIAEAIQLDSPTLSPLLKRLEAAGLITRERDPRDERNLQVNLTEAGAALRAKAER
CCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEHHHHHHHHHHHHH
IPPAVVESLGVTIADLEELREVLTRVNEAARRSLSTTRGVSA
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AALEGGSVEIDDPLRLDRQVCFALAVANRSVLAVYRPLLEPLGLTHPQYLVMLALWERA
CCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PMSVKAIAEAIQLDSPTLSPLLKRLEAAGLITRERDPRDERNLQVNLTEAGAALRAKAER
CCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEHHHHHHHHHHHHH
IPPAVVESLGVTIADLEELREVLTRVNEAARRSLSTTRGVSA
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]