| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54025681
Identifier: 54025681
GI number: 54025681
Start: 3925089
End: 3925661
Strand: Reverse
Name: 54025681
Synonym: nfa37110
Alternate gene names: NA
Gene position: 3925661-3925089 (Counterclockwise)
Preceding gene: 54025682
Following gene: 54025680
Centisome position: 65.2
GC content: 68.06
Gene sequence:
>573_bases ATGAGCGCTGCGGAGGAGACGACGGACCGCGGCGGTGACATCGTGGACATCGGTGCGGGCGAACCCGATCGGCTGCAACG GCTCTGGACGCCGTACCGGATGTCCTACATCACCGAGGCGGCGGGCTCGCGGCCGACCGATGCCACCGGCCACCCGTTCA CCGACATCCCCAAGATGTCCGACGAGGACGGGCTGATCATCGCCCGCGGCGAGCTGGTGTACGCCGTGCTGAATCTGTAC CCGTACAACCCGGGACACATGATGGTGGTGCCCTACCGCCGCGTCGCCGATCTCGAGGATCTCACCGAGGCCGAGAGCGC CGAGCTGATGGCGTTCACCCAGCGGGCGATCCGGGTGATGAAGAGCGTGTCGCGGCCGCACGGTTTCAACGTCGGCCTGA ATCTGGGCGGGGTGGCGGGCGGTTCGCTGGCCGACCACCTGCATCAGCACATCGTGCCGCGCTGGGGCGGGGACGCGAAC TTCATCACCGTCGTGGGCGGGGTGAAGGTGATGCCGCAGCTGCTGCGCGAGACCAGGGCACTGCTCGCGCAGGCGTGGAA GGAATCGGAGTAG
Upstream 100 bases:
>100_bases CGCCGACGCGGTGGCGACCATCGTGGCGTGGATCACCAACCGGGAGAACGCTTCTCCGACCGCGGAGGGGTTCGAGATCG TCACGGCGGGGGAGGGATAG
Downstream 100 bases:
>100_bases GTGCTCAGCTTCTTCGGCCGCGAGACCTTCGCCAAGGCCACCGCGCCGCTGGGCAGGGCGCTCGTCGGCACCGGGCTCAC CCCCGACGCCGTCACCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: ATP adenylyltransferase; Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase; AP,A phosphorylase [H]
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSAAEETTDRGGDIVDIGAGEPDRLQRLWTPYRMSYITEAAGSRPTDATGHPFTDIPKMSDEDGLIIARGELVYAVLNLY PYNPGHMMVVPYRRVADLEDLTEAESAELMAFTQRAIRVMKSVSRPHGFNVGLNLGGVAGGSLADHLHQHIVPRWGGDAN FITVVGGVKVMPQLLRETRALLAQAWKESE
Sequences:
>Translated_190_residues MSAAEETTDRGGDIVDIGAGEPDRLQRLWTPYRMSYITEAAGSRPTDATGHPFTDIPKMSDEDGLIIARGELVYAVLNLY PYNPGHMMVVPYRRVADLEDLTEAESAELMAFTQRAIRVMKSVSRPHGFNVGLNLGGVAGGSLADHLHQHIVPRWGGDAN FITVVGGVKVMPQLLRETRALLAQAWKESE >Mature_189_residues SAAEETTDRGGDIVDIGAGEPDRLQRLWTPYRMSYITEAAGSRPTDATGHPFTDIPKMSDEDGLIIARGELVYAVLNLYP YNPGHMMVVPYRRVADLEDLTEAESAELMAFTQRAIRVMKSVSRPHGFNVGLNLGGVAGGSLADHLHQHIVPRWGGDANF ITVVGGVKVMPQLLRETRALLAQAWKESE
Specific function: Catabolizes diadenosine 5',5'''-P1,P4-tetraphosphate (Ap4A) into ADP and ATP. It does not catalyze the reverse phosphorolysis reaction. The optimum substrates are dinucleoside polyphosphates containing four or five phosphate residues [H]
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: =2.7.7.53 [H]
Molecular weight: Translated: 20815; Mature: 20684
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAEETTDRGGDIVDIGAGEPDRLQRLWTPYRMSYITEAAGSRPTDATGHPFTDIPKMS CCCCCCCCCCCCCEEECCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC DEDGLIIARGELVYAVLNLYPYNPGHMMVVPYRRVADLEDLTEAESAELMAFTQRAIRVM CCCCEEEECCHHHHHHHHHCCCCCCCEEEECHHHHHCHHHHHHHHHHHHHHHHHHHHHHH KSVSRPHGFNVGLNLGGVAGGSLADHLHQHIVPRWGGDANFITVVGGVKVMPQLLRETRA HHHCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHH LLAQAWKESE HHHHHHHCCC >Mature Secondary Structure SAAEETTDRGGDIVDIGAGEPDRLQRLWTPYRMSYITEAAGSRPTDATGHPFTDIPKMS CCCCCCCCCCCCEEECCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC DEDGLIIARGELVYAVLNLYPYNPGHMMVVPYRRVADLEDLTEAESAELMAFTQRAIRVM CCCCEEEECCHHHHHHHHHCCCCCCCEEEECHHHHHCHHHHHHHHHHHHHHHHHHHHHHH KSVSRPHGFNVGLNLGGVAGGSLADHLHQHIVPRWGGDANFITVVGGVKVMPQLLRETRA HHHCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHH LLAQAWKESE HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12368430; 12218036 [H]