Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54025681

Identifier: 54025681

GI number: 54025681

Start: 3925089

End: 3925661

Strand: Reverse

Name: 54025681

Synonym: nfa37110

Alternate gene names: NA

Gene position: 3925661-3925089 (Counterclockwise)

Preceding gene: 54025682

Following gene: 54025680

Centisome position: 65.2

GC content: 68.06

Gene sequence:

>573_bases
ATGAGCGCTGCGGAGGAGACGACGGACCGCGGCGGTGACATCGTGGACATCGGTGCGGGCGAACCCGATCGGCTGCAACG
GCTCTGGACGCCGTACCGGATGTCCTACATCACCGAGGCGGCGGGCTCGCGGCCGACCGATGCCACCGGCCACCCGTTCA
CCGACATCCCCAAGATGTCCGACGAGGACGGGCTGATCATCGCCCGCGGCGAGCTGGTGTACGCCGTGCTGAATCTGTAC
CCGTACAACCCGGGACACATGATGGTGGTGCCCTACCGCCGCGTCGCCGATCTCGAGGATCTCACCGAGGCCGAGAGCGC
CGAGCTGATGGCGTTCACCCAGCGGGCGATCCGGGTGATGAAGAGCGTGTCGCGGCCGCACGGTTTCAACGTCGGCCTGA
ATCTGGGCGGGGTGGCGGGCGGTTCGCTGGCCGACCACCTGCATCAGCACATCGTGCCGCGCTGGGGCGGGGACGCGAAC
TTCATCACCGTCGTGGGCGGGGTGAAGGTGATGCCGCAGCTGCTGCGCGAGACCAGGGCACTGCTCGCGCAGGCGTGGAA
GGAATCGGAGTAG

Upstream 100 bases:

>100_bases
CGCCGACGCGGTGGCGACCATCGTGGCGTGGATCACCAACCGGGAGAACGCTTCTCCGACCGCGGAGGGGTTCGAGATCG
TCACGGCGGGGGAGGGATAG

Downstream 100 bases:

>100_bases
GTGCTCAGCTTCTTCGGCCGCGAGACCTTCGCCAAGGCCACCGCGCCGCTGGGCAGGGCGCTCGTCGGCACCGGGCTCAC
CCCCGACGCCGTCACCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: ATP adenylyltransferase; Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase; AP,A phosphorylase [H]

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSAAEETTDRGGDIVDIGAGEPDRLQRLWTPYRMSYITEAAGSRPTDATGHPFTDIPKMSDEDGLIIARGELVYAVLNLY
PYNPGHMMVVPYRRVADLEDLTEAESAELMAFTQRAIRVMKSVSRPHGFNVGLNLGGVAGGSLADHLHQHIVPRWGGDAN
FITVVGGVKVMPQLLRETRALLAQAWKESE

Sequences:

>Translated_190_residues
MSAAEETTDRGGDIVDIGAGEPDRLQRLWTPYRMSYITEAAGSRPTDATGHPFTDIPKMSDEDGLIIARGELVYAVLNLY
PYNPGHMMVVPYRRVADLEDLTEAESAELMAFTQRAIRVMKSVSRPHGFNVGLNLGGVAGGSLADHLHQHIVPRWGGDAN
FITVVGGVKVMPQLLRETRALLAQAWKESE
>Mature_189_residues
SAAEETTDRGGDIVDIGAGEPDRLQRLWTPYRMSYITEAAGSRPTDATGHPFTDIPKMSDEDGLIIARGELVYAVLNLYP
YNPGHMMVVPYRRVADLEDLTEAESAELMAFTQRAIRVMKSVSRPHGFNVGLNLGGVAGGSLADHLHQHIVPRWGGDANF
ITVVGGVKVMPQLLRETRALLAQAWKESE

Specific function: Catabolizes diadenosine 5',5'''-P1,P4-tetraphosphate (Ap4A) into ADP and ATP. It does not catalyze the reverse phosphorolysis reaction. The optimum substrates are dinucleoside polyphosphates containing four or five phosphate residues [H]

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: =2.7.7.53 [H]

Molecular weight: Translated: 20815; Mature: 20684

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAEETTDRGGDIVDIGAGEPDRLQRLWTPYRMSYITEAAGSRPTDATGHPFTDIPKMS
CCCCCCCCCCCCCEEECCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
DEDGLIIARGELVYAVLNLYPYNPGHMMVVPYRRVADLEDLTEAESAELMAFTQRAIRVM
CCCCEEEECCHHHHHHHHHCCCCCCCEEEECHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
KSVSRPHGFNVGLNLGGVAGGSLADHLHQHIVPRWGGDANFITVVGGVKVMPQLLRETRA
HHHCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHH
LLAQAWKESE
HHHHHHHCCC
>Mature Secondary Structure 
SAAEETTDRGGDIVDIGAGEPDRLQRLWTPYRMSYITEAAGSRPTDATGHPFTDIPKMS
CCCCCCCCCCCCEEECCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
DEDGLIIARGELVYAVLNLYPYNPGHMMVVPYRRVADLEDLTEAESAELMAFTQRAIRVM
CCCCEEEECCHHHHHHHHHCCCCCCCEEEECHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
KSVSRPHGFNVGLNLGGVAGGSLADHLHQHIVPRWGGDANFITVVGGVKVMPQLLRETRA
HHHCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHH
LLAQAWKESE
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12368430; 12218036 [H]