Click here to switch to the map view.

The map label for this gene is 54025644

Identifier: 54025644

GI number: 54025644

Start: 3891235

End: 3892746

Strand: Reverse

Name: 54025644

Synonym: nfa36740

Alternate gene names: NA

Gene position: 3892746-3891235 (Counterclockwise)

Preceding gene: 54025645

Following gene: 54025643

Centisome position: 64.65

GC content: 70.17

Gene sequence:

>1512_bases
ATGGTGACCACAGAGACGGCCGAGCCACGAGGGGTGCACACGATGGTGCGAAAACTCCTGACCATCCTCGCGGTGATCTT
CACCGTGATGATCGCGACCCCGACGGTGGCCTACGGGCAGACCTACGGATTCGACGAGACCTGTAACGAGATCCACGACA
CCCTCGACGGTGTCGGCCTGCCCGGCATCTCGCTGGGCGATGCCGCCTCCGCGGTGTGCAAGGCGGGCAACGCCGCCTCC
CATCCCGGCGACGCCGCCGACGCGGTGAAGGACAAGGCGTGGGATTCCACCTTCGGCAAGGTGGTCGACTCGCTGATGAA
CGGCCTCGGCGAGGCCATCATCCTGGCGTTGACGTTCTGGATGAAGGTGCCCAACGAGGCGGCCAGCGATTCGGGTTCGT
TGTTCACCAAGATCAACGACTACACCTATCAGGTGCAGATCCTGCTGCTCATCGCCTCGGTGATCCTCACCGGCGCCCGA
CTGGCCGAGGCCAGACGCGGAGCCGCCGTGAGCGAGGCGGCCGAATCGTTCCGCATGTTCGCCCGGGTGGTGTTCAGCTC
CTGGATGCTGGGCGCGGTGATCGTGGCGGGCACGCAGGCCTCCGACCGGTTCGCCGAGTGGATCATCAGCGACGCCACCA
ACGGCAACGCCAAGGACATGGCCGAGCTGATGGTGAAAACCAGCAAGCTGCAAGCGTTCTCGCCCGGCCTGGTGCTCATC
ATCGCGATCGTCGGACTGCTCGGCGCGCTCGCGCAGATCGTGCTGGCCATCGTCCGGCAGGGCCTGCTGATCATCGCCGC
GGGTGTGTTGCCGCTGGCGGCGGCGGCCTCGGGCATGAACGTCGGCAAGCAGTCGTATCAGAAGCTGGTGGGCTGGATCA
TCGCGTTCATGCTCTGGAAACCGGTGGCCGCGATCGTCTACATGATCGCGTTCACCACCGCCGGGCACGTCGACGGGCTC
ACCTCGGCCACCTCGCTGCCCGAAGGCGAAGAGGCCCAGCGCATGCTGGTCGCGATCGTGCTGCTGTGCAGCGTGGCGTT
CGTGCTGCCCGCCCTGATGCGCCTGGTCACCCCGGCGGTGGCGATCGTCGGCTCCGGCGGCTCCGGCCTCACCGCCGCGG
GTGGCACCCTGGTGGCCGCGGCCGCCCTCGGTGCGATGGGCACCAAGGCGGTCGGCGTCAAGGGTGCGGCCGCCCCGGGT
TCGGCCGGTTATGTATCCGGCAGCGGTGCCGGGCCGCGGCCGCCGGGTGGCGCGGGCGGCCGTGGCGGCGCGCCCCGGCC
CACCCCGCCGCGCGGTGGCGGTGGCGGCGGCGCGAGCGGACAACCGCGCGCCTCCGGCACGCAGGGCTCGGCCGGAGTAC
CGTCCGGAGCTGCCGCCGCCGCGGGCCGGATCGGCGCCGCGCGTGCCGCCACCAGCGGGATGCGCCGAGCCGACGAATCG
ATGGGTGACGTGGCAGGGGACCGTTGGGCGAACCGCTCGCCCGACCTCGGGAGGAGCACCATTCCGCGATGA

Upstream 100 bases:

>100_bases
GGCTGGTGATGGTGTGGGAAGCGGGGGACTGGCGGCTCAAGCCCGCCACCGCCGAGGGCAGCCGGACCGAATACATCGAA
TCGCTTGCGGGGTGGACGAC

Downstream 100 bases:

>100_bases
CGATCAGCGACACCTACGAGCGCCGCTCCTACGGGCTGTGGCAGAAGCCGCGCAGCGCGGGCCTGTTCGGCCTGCGCTGG
GAAGAGACGGTGATCGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MVTTETAEPRGVHTMVRKLLTILAVIFTVMIATPTVAYGQTYGFDETCNEIHDTLDGVGLPGISLGDAASAVCKAGNAAS
HPGDAADAVKDKAWDSTFGKVVDSLMNGLGEAIILALTFWMKVPNEAASDSGSLFTKINDYTYQVQILLLIASVILTGAR
LAEARRGAAVSEAAESFRMFARVVFSSWMLGAVIVAGTQASDRFAEWIISDATNGNAKDMAELMVKTSKLQAFSPGLVLI
IAIVGLLGALAQIVLAIVRQGLLIIAAGVLPLAAAASGMNVGKQSYQKLVGWIIAFMLWKPVAAIVYMIAFTTAGHVDGL
TSATSLPEGEEAQRMLVAIVLLCSVAFVLPALMRLVTPAVAIVGSGGSGLTAAGGTLVAAAALGAMGTKAVGVKGAAAPG
SAGYVSGSGAGPRPPGGAGGRGGAPRPTPPRGGGGGGASGQPRASGTQGSAGVPSGAAAAAGRIGAARAATSGMRRADES
MGDVAGDRWANRSPDLGRSTIPR

Sequences:

>Translated_503_residues
MVTTETAEPRGVHTMVRKLLTILAVIFTVMIATPTVAYGQTYGFDETCNEIHDTLDGVGLPGISLGDAASAVCKAGNAAS
HPGDAADAVKDKAWDSTFGKVVDSLMNGLGEAIILALTFWMKVPNEAASDSGSLFTKINDYTYQVQILLLIASVILTGAR
LAEARRGAAVSEAAESFRMFARVVFSSWMLGAVIVAGTQASDRFAEWIISDATNGNAKDMAELMVKTSKLQAFSPGLVLI
IAIVGLLGALAQIVLAIVRQGLLIIAAGVLPLAAAASGMNVGKQSYQKLVGWIIAFMLWKPVAAIVYMIAFTTAGHVDGL
TSATSLPEGEEAQRMLVAIVLLCSVAFVLPALMRLVTPAVAIVGSGGSGLTAAGGTLVAAAALGAMGTKAVGVKGAAAPG
SAGYVSGSGAGPRPPGGAGGRGGAPRPTPPRGGGGGGASGQPRASGTQGSAGVPSGAAAAAGRIGAARAATSGMRRADES
MGDVAGDRWANRSPDLGRSTIPR
>Mature_503_residues
MVTTETAEPRGVHTMVRKLLTILAVIFTVMIATPTVAYGQTYGFDETCNEIHDTLDGVGLPGISLGDAASAVCKAGNAAS
HPGDAADAVKDKAWDSTFGKVVDSLMNGLGEAIILALTFWMKVPNEAASDSGSLFTKINDYTYQVQILLLIASVILTGAR
LAEARRGAAVSEAAESFRMFARVVFSSWMLGAVIVAGTQASDRFAEWIISDATNGNAKDMAELMVKTSKLQAFSPGLVLI
IAIVGLLGALAQIVLAIVRQGLLIIAAGVLPLAAAASGMNVGKQSYQKLVGWIIAFMLWKPVAAIVYMIAFTTAGHVDGL
TSATSLPEGEEAQRMLVAIVLLCSVAFVLPALMRLVTPAVAIVGSGGSGLTAAGGTLVAAAALGAMGTKAVGVKGAAAPG
SAGYVSGSGAGPRPPGGAGGRGGAPRPTPPRGGGGGGASGQPRASGTQGSAGVPSGAAAAAGRIGAARAATSGMRRADES
MGDVAGDRWANRSPDLGRSTIPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50657; Mature: 50657

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTTETAEPRGVHTMVRKLLTILAVIFTVMIATPTVAYGQTYGFDETCNEIHDTLDGVGL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHCCCC
PGISLGDAASAVCKAGNAASHPGDAADAVKDKAWDSTFGKVVDSLMNGLGEAIILALTFW
CCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKVPNEAASDSGSLFTKINDYTYQVQILLLIASVILTGARLAEARRGAAVSEAAESFRMF
HHCCCHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ARVVFSSWMLGAVIVAGTQASDRFAEWIISDATNGNAKDMAELMVKTSKLQAFSPGLVLI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
IAIVGLLGALAQIVLAIVRQGLLIIAAGVLPLAAAASGMNVGKQSYQKLVGWIIAFMLWK
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
PVAAIVYMIAFTTAGHVDGLTSATSLPEGEEAQRMLVAIVLLCSVAFVLPALMRLVTPAV
HHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIVGSGGSGLTAAGGTLVAAAALGAMGTKAVGVKGAAAPGSAGYVSGSGAGPRPPGGAGG
HEEECCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGGAPRPTPPRGGGGGGASGQPRASGTQGSAGVPSGAAAAAGRIGAARAATSGMRRADES
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MGDVAGDRWANRSPDLGRSTIPR
HHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVTTETAEPRGVHTMVRKLLTILAVIFTVMIATPTVAYGQTYGFDETCNEIHDTLDGVGL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHCCCC
PGISLGDAASAVCKAGNAASHPGDAADAVKDKAWDSTFGKVVDSLMNGLGEAIILALTFW
CCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKVPNEAASDSGSLFTKINDYTYQVQILLLIASVILTGARLAEARRGAAVSEAAESFRMF
HHCCCHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ARVVFSSWMLGAVIVAGTQASDRFAEWIISDATNGNAKDMAELMVKTSKLQAFSPGLVLI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
IAIVGLLGALAQIVLAIVRQGLLIIAAGVLPLAAAASGMNVGKQSYQKLVGWIIAFMLWK
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
PVAAIVYMIAFTTAGHVDGLTSATSLPEGEEAQRMLVAIVLLCSVAFVLPALMRLVTPAV
HHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIVGSGGSGLTAAGGTLVAAAALGAMGTKAVGVKGAAAPGSAGYVSGSGAGPRPPGGAGG
HEEECCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGGAPRPTPPRGGGGGGASGQPRASGTQGSAGVPSGAAAAAGRIGAARAATSGMRRADES
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MGDVAGDRWANRSPDLGRSTIPR
HHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA