| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is phnE [H]
Identifier: 54025498
GI number: 54025498
Start: 3740081
End: 3741679
Strand: Reverse
Name: phnE [H]
Synonym: nfa35280
Alternate gene names: 54025498
Gene position: 3741679-3740081 (Counterclockwise)
Preceding gene: 54025499
Following gene: 54025497
Centisome position: 62.14
GC content: 71.79
Gene sequence:
>1599_bases GTGACCGCGACGCTCACCACACCGGGGCCCGTCCTGCCCGGCTCGCCGCCGCGGGCCGAGCGGGTGCGGGCGGCGCTGCT GCGGCTGCTCGGGGTGGGCGGTCTCGTGCTGACCCTGATCTCGGCCTGGTCGATCGATTTCGCCCCGGCCACCCTGCTGG ACGGTCTCGACGACATGGCCGCGCTGCTCGAGCGGATGCTGCCGCCGCGACTGGACGATCCGCCGCGGATCTGGGCGCTC GCGGTGGAGACGCTGCTGATGGCGGTGCTTGGCACCGTGCTGGCGGCACTGGCCTCGATGCCGTTGGCGTTCCTGGCGGC ACGCAACACCACCCCGCACCCGGCGGTGGCGGCGATCGCGCGCGGGATCATCACCTTCTGCCGGGCCATGCCGGACCTGT TGTTCGCGGCGTTGCTGGTGCGCGCGCTCGGCATCGGTGTGCTGCCCGGCATTCTCGCGCTGGCGCTGCACTCCATCGGC ATGCTCGGCAAGCTGTTCGCCGACGCGATCGAGCAGACCGATCCCGGCCCGCGCGAGGCCGCCCGGGCGGCGGGCGCCGG GTACGTGCGCGAGATGATCCACGCCGTGGTGCCGCAGACGGTCCCGTCCTGGATCGGCACGTTCGTCTATCGCGTCGACA TCAACCTGCGGATCTCGGTGGTGCTCGGCTTCGTCGGCGCGGGCGGCATCGGTTTCGCGCTGCAGGATTCGTTGCGCGGG CTGGCCTATCCCCGCGCGCTGGGCATCGTGGCGGTGATCCTGGCGATCATCGCGGCGATGGAGGTGTTCGCGATCCTCGC GCGGCGGGTGCTGCTGAGTCCGGAGTCCCTCGGACCCCGGGCCGCCAGGGCGGCCCGCACGGCCTTCGGCGCGATCGCCG TGGCGGCCACGGTGGCCGCGCTGGTGGTGCTCGACGTCGATCCGGTGGAGCTGCTGACCTGGCCTACCGCCGCCGTCGAG GTGTTCGGGCGGCTGCTGCCGCCGGATTTCGCCGCGCTGGGCCCGCAGTTGCTCGAGGCGGCCTGGCAGACGGTCGCGAT CGCCGTGGTGGCGACCGCGATCGGGGCGGTACTGTCAGTGCCCGTCGGAATCCTCGCCGCCCGCACGGTGACTCCGCATC CGGCGGTGTACTGGGCTGCGCGGGCCTGGATCCTGGTCGTGCGCGCGATCCCCGAGCTGATCCTGGCCGTGATCTTCGTC GCCGCACTGGGCCTCGGGCCGATCGCGGGTACCTGCGCGCTGGCCATCGGCTCGGTCGGGCTGCTCGGCAAACTCGTCGC CGACGCCGTCGAGGAGATCGACACGGGCCCGCTCGAAGCGGTCCGTGCGCTCGGCGGCGGCTGGTGGAAGACGTTGGTGG CGGCGGTGATTCCGCAGGCGGTGCCCGCGCTGGTTGGTTCGACGCTCTACCTGCTCGACGTGAACATCCGCACCTCCACG ATCCTGGGGATCGTGGGCGCGGGCGGGATCGGTTACCTGTTGTTCGAGTCGATCCGCACGCTCGAGTTCGGCGTCGCCGG CGCGATCGTGCTCGTCGTCTTCGCGCTCGTCTACTTCATCGAAAGGCTCTCCGGATGGATTCGCTCCCAGGTGGTGTGA
Upstream 100 bases:
>100_bases ACCGGCCCGCCGCCGGACTGTCCCGCGACGAGGTCATGGCGATCTACCAGCGGGCCGAGGTCACCCGGTCGGCGCCCGCC GGACTGGCCGCGGGGGCGCT
Downstream 100 bases:
>100_bases CGCGCGCGGCGGTGTGGACCGGTGCCGGGGTCGCGGTCCGCGACGTGCCGGTGCCGCGCCTGGCGCCGGGCCAATCGCTG GTGCGGGTCCGCCTCGCCAC
Product: putative transporter
Products: 3-phospho-serine [Cytoplasm]; phosphite [Cytoplasm]; ADP; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MTATLTTPGPVLPGSPPRAERVRAALLRLLGVGGLVLTLISAWSIDFAPATLLDGLDDMAALLERMLPPRLDDPPRIWAL AVETLLMAVLGTVLAALASMPLAFLAARNTTPHPAVAAIARGIITFCRAMPDLLFAALLVRALGIGVLPGILALALHSIG MLGKLFADAIEQTDPGPREAARAAGAGYVREMIHAVVPQTVPSWIGTFVYRVDINLRISVVLGFVGAGGIGFALQDSLRG LAYPRALGIVAVILAIIAAMEVFAILARRVLLSPESLGPRAARAARTAFGAIAVAATVAALVVLDVDPVELLTWPTAAVE VFGRLLPPDFAALGPQLLEAAWQTVAIAVVATAIGAVLSVPVGILAARTVTPHPAVYWAARAWILVVRAIPELILAVIFV AALGLGPIAGTCALAIGSVGLLGKLVADAVEEIDTGPLEAVRALGGGWWKTLVAAVIPQAVPALVGSTLYLLDVNIRTST ILGIVGAGGIGYLLFESIRTLEFGVAGAIVLVVFALVYFIERLSGWIRSQVV
Sequences:
>Translated_532_residues MTATLTTPGPVLPGSPPRAERVRAALLRLLGVGGLVLTLISAWSIDFAPATLLDGLDDMAALLERMLPPRLDDPPRIWAL AVETLLMAVLGTVLAALASMPLAFLAARNTTPHPAVAAIARGIITFCRAMPDLLFAALLVRALGIGVLPGILALALHSIG MLGKLFADAIEQTDPGPREAARAAGAGYVREMIHAVVPQTVPSWIGTFVYRVDINLRISVVLGFVGAGGIGFALQDSLRG LAYPRALGIVAVILAIIAAMEVFAILARRVLLSPESLGPRAARAARTAFGAIAVAATVAALVVLDVDPVELLTWPTAAVE VFGRLLPPDFAALGPQLLEAAWQTVAIAVVATAIGAVLSVPVGILAARTVTPHPAVYWAARAWILVVRAIPELILAVIFV AALGLGPIAGTCALAIGSVGLLGKLVADAVEEIDTGPLEAVRALGGGWWKTLVAAVIPQAVPALVGSTLYLLDVNIRTST ILGIVGAGGIGYLLFESIRTLEFGVAGAIVLVVFALVYFIERLSGWIRSQVV >Mature_531_residues TATLTTPGPVLPGSPPRAERVRAALLRLLGVGGLVLTLISAWSIDFAPATLLDGLDDMAALLERMLPPRLDDPPRIWALA VETLLMAVLGTVLAALASMPLAFLAARNTTPHPAVAAIARGIITFCRAMPDLLFAALLVRALGIGVLPGILALALHSIGM LGKLFADAIEQTDPGPREAARAAGAGYVREMIHAVVPQTVPSWIGTFVYRVDINLRISVVLGFVGAGGIGFALQDSLRGL AYPRALGIVAVILAIIAAMEVFAILARRVLLSPESLGPRAARAARTAFGAIAVAATVAALVVLDVDPVELLTWPTAAVEV FGRLLPPDFAALGPQLLEAAWQTVAIAVVATAIGAVLSVPVGILAARTVTPHPAVYWAARAWILVVRAIPELILAVIFVA ALGLGPIAGTCALAIGSVGLLGKLVADAVEEIDTGPLEAVRALGGGWWKTLVAAVIPQAVPALVGSTLYLLDVNIRTSTI LGIVGAGGIGYLLFESIRTLEFGVAGAIVLVVFALVYFIERLSGWIRSQVV
Specific function: Part of the ABC transporter complex phnCDE involved in phosphate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG3639
COG function: function code P; ABC-type phosphate/phosphonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005769 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 55107; Mature: 54976
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATLTTPGPVLPGSPPRAERVRAALLRLLGVGGLVLTLISAWSIDFAPATLLDGLDDMA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHCHHHHH ALLERMLPPRLDDPPRIWALAVETLLMAVLGTVLAALASMPLAFLAARNTTPHPAVAAIA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH RGIITFCRAMPDLLFAALLVRALGIGVLPGILALALHSIGMLGKLFADAIEQTDPGPREA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ARAAGAGYVREMIHAVVPQTVPSWIGTFVYRVDINLRISVVLGFVGAGGIGFALQDSLRG HHHCCHHHHHHHHHHHHCHHHHHHHHHHHHEEECCEEHHHHHHHHCCCCCHHHHHHHHHH LAYPRALGIVAVILAIIAAMEVFAILARRVLLSPESLGPRAARAARTAFGAIAVAATVAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LVVLDVDPVELLTWPTAAVEVFGRLLPPDFAALGPQLLEAAWQTVAIAVVATAIGAVLSV HHHHCCCHHHHHHCCHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH PVGILAARTVTPHPAVYWAARAWILVVRAIPELILAVIFVAALGLGPIAGTCALAIGSVG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LLGKLVADAVEEIDTGPLEAVRALGGGWWKTLVAAVIPQAVPALVGSTLYLLDVNIRTST HHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHH ILGIVGAGGIGYLLFESIRTLEFGVAGAIVLVVFALVYFIERLSGWIRSQVV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TATLTTPGPVLPGSPPRAERVRAALLRLLGVGGLVLTLISAWSIDFAPATLLDGLDDMA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHCHHHHH ALLERMLPPRLDDPPRIWALAVETLLMAVLGTVLAALASMPLAFLAARNTTPHPAVAAIA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH RGIITFCRAMPDLLFAALLVRALGIGVLPGILALALHSIGMLGKLFADAIEQTDPGPREA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ARAAGAGYVREMIHAVVPQTVPSWIGTFVYRVDINLRISVVLGFVGAGGIGFALQDSLRG HHHCCHHHHHHHHHHHHCHHHHHHHHHHHHEEECCEEHHHHHHHHCCCCCHHHHHHHHHH LAYPRALGIVAVILAIIAAMEVFAILARRVLLSPESLGPRAARAARTAFGAIAVAATVAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LVVLDVDPVELLTWPTAAVEVFGRLLPPDFAALGPQLLEAAWQTVAIAVVATAIGAVLSV HHHHCCCHHHHHHCCHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH PVGILAARTVTPHPAVYWAARAWILVVRAIPELILAVIFVAALGLGPIAGTCALAIGSVG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LLGKLVADAVEEIDTGPLEAVRALGGGWWKTLVAAVIPQAVPALVGSTLYLLDVNIRTST HHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHH ILGIVGAGGIGYLLFESIRTLEFGVAGAIVLVVFALVYFIERLSGWIRSQVV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA