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The map label for this gene is mer [H]

Identifier: 54025394

GI number: 54025394

Start: 3628865

End: 3629902

Strand: Reverse

Name: mer [H]

Synonym: nfa34240

Alternate gene names: 54025394

Gene position: 3629902-3628865 (Counterclockwise)

Preceding gene: 54025397

Following gene: 54025392

Centisome position: 60.29

GC content: 69.36

Gene sequence:

>1038_bases
ATGCGGATCGGATTGGGCATCAACTACTCGGGCGGCTTCAAAGAGGTCGCGGCCGAAGTGGCCGACCTGGAGAGAGCCGG
ACTCGACATCGTCTTCGTGCCCGAGGCGTACTCCTTCGACGCGGTCAGCGCGCTGGGCTACCTGGCCGCCCGAACCGAAC
GGGTGCAGCTGGCGTCGGGCATCCTGCAGCTCTACACCCGCACCCCCAGCCTCACCGCCATGACCGCCGCGGGCCTGGAC
TTCGTCTCCGACGGCCGCTTCCTGCTCGGCCTCGGCGCCTCCGGCCCGCAGGTCATCGAGGGCTTTCACGGCGTGCCCTA
CGACGCGCCCATCGGCCGCACCCGCGAACTGGTGGAGATCTGCCGCAAGGTGTGGCGGCGCGAACGCCTGGAATACCAGG
GCAAGTACTACCAGATCCCGCTGCCCGCCGAGCGCGGCACCGGCCTGGGCAAGCCGCTCAAGCTCATCAATCACCCCGTG
CGCGACCGCATCCCGGTCCTGCTGGCCGCCCTCGGCCCCAAGAACGTCGAACTGGCCGCCGAGATCGCCGAGGGCTGGCA
GCCGATCTTCTTCCTGCCCGAAAAGGCCACCGAGGTCTGGGGCGAATCGCTGGCCGCGGGCCGCGCCAAGCGCGATCCCG
CCCTGGGCGAGCTGGAGGTGTTCGCCGGCCCGGCGCTGGCCATCGGCGAGAACGTCACCCCGCTGCTCGAGTTCGTCAAG
CCGCACCTGGCCCTCTACATCGGCGGCATGGGCGCCAAGGGCAAGAACTTCTACCACACCCTGGCCACCAAGTACGGCTA
CGGCGCCGAAGCCGACCGCATCCAGGAGCTCTACCTGGCCGGCAAGAAGGAGGAGGCCACCAAGGTGGTCCCCGACGCGC
TCGTCCGCGACATCTCCCTGGTCGGCCCCGCCGGTTTCGTCAAGGAACGCATCGCCGCCTTCCGCGAGGCGGGCGCCACC
GTGCTGAACGTGGTGCCGATGGCAGGCACCGCCGCCGAACGGGTGAAACTGATCGAGCAGCTGCGCGAACTGCTCTGA

Upstream 100 bases:

>100_bases
GTGACTACGGCCTCACGCTACTCGGCGCCCGCTCGCCGTCCGCGCCCGACACCGCGAGCCGGTGCGCGCCCGCGCGATAG
CCGGGGTTATGTTGAGCACT

Downstream 100 bases:

>100_bases
CCCCGGCAAGCGCGGAACGAACACAGCGCAGAACGAACGGCGTCCCGGCTCTCCGCCGGAACGCCGTTCGTGGTTCGGGA
GCGGTCAGCCCTTGCCGACC

Product: putative oxidoreductase

Products: NA

Alternate protein names: Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase; Methylene-H(4)MPT reductase [H]

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MRIGLGINYSGGFKEVAAEVADLERAGLDIVFVPEAYSFDAVSALGYLAARTERVQLASGILQLYTRTPSLTAMTAAGLD
FVSDGRFLLGLGASGPQVIEGFHGVPYDAPIGRTRELVEICRKVWRRERLEYQGKYYQIPLPAERGTGLGKPLKLINHPV
RDRIPVLLAALGPKNVELAAEIAEGWQPIFFLPEKATEVWGESLAAGRAKRDPALGELEVFAGPALAIGENVTPLLEFVK
PHLALYIGGMGAKGKNFYHTLATKYGYGAEADRIQELYLAGKKEEATKVVPDALVRDISLVGPAGFVKERIAAFREAGAT
VLNVVPMAGTAAERVKLIEQLRELL

Sequences:

>Translated_345_residues
MRIGLGINYSGGFKEVAAEVADLERAGLDIVFVPEAYSFDAVSALGYLAARTERVQLASGILQLYTRTPSLTAMTAAGLD
FVSDGRFLLGLGASGPQVIEGFHGVPYDAPIGRTRELVEICRKVWRRERLEYQGKYYQIPLPAERGTGLGKPLKLINHPV
RDRIPVLLAALGPKNVELAAEIAEGWQPIFFLPEKATEVWGESLAAGRAKRDPALGELEVFAGPALAIGENVTPLLEFVK
PHLALYIGGMGAKGKNFYHTLATKYGYGAEADRIQELYLAGKKEEATKVVPDALVRDISLVGPAGFVKERIAAFREAGAT
VLNVVPMAGTAAERVKLIEQLRELL
>Mature_345_residues
MRIGLGINYSGGFKEVAAEVADLERAGLDIVFVPEAYSFDAVSALGYLAARTERVQLASGILQLYTRTPSLTAMTAAGLD
FVSDGRFLLGLGASGPQVIEGFHGVPYDAPIGRTRELVEICRKVWRRERLEYQGKYYQIPLPAERGTGLGKPLKLINHPV
RDRIPVLLAALGPKNVELAAEIAEGWQPIFFLPEKATEVWGESLAAGRAKRDPALGELEVFAGPALAIGENVTPLLEFVK
PHLALYIGGMGAKGKNFYHTLATKYGYGAEADRIQELYLAGKKEEATKVVPDALVRDISLVGPAGFVKERIAAFREAGAT
VLNVVPMAGTAAERVKLIEQLRELL

Specific function: Catalyzes the oxidation of methyl-H(4)MPT to methylene- H(4)MPT [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mer family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019946 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: =1.5.99.11 [H]

Molecular weight: Translated: 37326; Mature: 37326

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGLGINYSGGFKEVAAEVADLERAGLDIVFVPEAYSFDAVSALGYLAARTERVQLASG
CEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILQLYTRTPSLTAMTAAGLDFVSDGRFLLGLGASGPQVIEGFHGVPYDAPIGRTRELVEI
HHHHHHCCCCHHHHHHHCCCEECCCCEEEEECCCCHHHHHCCCCCCCCCCCCCHHHHHHH
CRKVWRRERLEYQGKYYQIPLPAERGTGLGKPLKLINHPVRDRIPVLLAALGPKNVELAA
HHHHHHHHHHHHCCCEEEECCCHHCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHH
EIAEGWQPIFFLPEKATEVWGESLAAGRAKRDPALGELEVFAGPALAIGENVTPLLEFVK
HHHCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHCCCCCHHHHHHHH
PHLALYIGGMGAKGKNFYHTLATKYGYGAEADRIQELYLAGKKEEATKVVPDALVRDISL
HHHEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VGPAGFVKERIAAFREAGATVLNVVPMAGTAAERVKLIEQLRELL
CCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRIGLGINYSGGFKEVAAEVADLERAGLDIVFVPEAYSFDAVSALGYLAARTERVQLASG
CEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILQLYTRTPSLTAMTAAGLDFVSDGRFLLGLGASGPQVIEGFHGVPYDAPIGRTRELVEI
HHHHHHCCCCHHHHHHHCCCEECCCCEEEEECCCCHHHHHCCCCCCCCCCCCCHHHHHHH
CRKVWRRERLEYQGKYYQIPLPAERGTGLGKPLKLINHPVRDRIPVLLAALGPKNVELAA
HHHHHHHHHHHHCCCEEEECCCHHCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHHH
EIAEGWQPIFFLPEKATEVWGESLAAGRAKRDPALGELEVFAGPALAIGENVTPLLEFVK
HHHCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHCCCCCHHHHHHHH
PHLALYIGGMGAKGKNFYHTLATKYGYGAEADRIQELYLAGKKEEATKVVPDALVRDISL
HHHEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VGPAGFVKERIAAFREAGATVLNVVPMAGTAAERVKLIEQLRELL
CCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]