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The map label for this gene is fadE31 [H]

Identifier: 54025377

GI number: 54025377

Start: 3611084

End: 3612307

Strand: Reverse

Name: fadE31 [H]

Synonym: nfa34080

Alternate gene names: 54025377

Gene position: 3612307-3611084 (Counterclockwise)

Preceding gene: 54025378

Following gene: 54025376

Centisome position: 59.99

GC content: 69.04

Gene sequence:

>1224_bases
ATGGATTTCGCCTACGACGCCCGCACCGAGGAATTGCGTGCCTCGCTCCTGGAATTCATGGACACCCACATCTACCCGGC
CGAGCCGGTGTTCCGCGAGCAACTCGCCCAGCTGGAGGACCGCTGGGCGTGGGATTCGGTGCCGGTGCTGGCAGAACTGC
GCGCCGAGGCCCGCCGCCGCGGCCTGTGGAATCTGTTCCTGCCCGGCGACGAGGGCGCCGGGCTGACCAACCTGCAGTAC
GCGCCGCTGGCCGAGATCACCGGCCGCAGCGGGCATCTGGCCCCGGCCGTGCTCAACTGCGCGGCGCCGGACACCGGCAA
CATGGAGGTGCTGGCGCAGTTCGGGACCGAGGAACAGCGCACCCAGTGGCTCGAGCCGCTGCTCGACGGCCGGATCCGGT
CGGCGTTCGCGATGACCGAGCCCGACGTGGCCTCCTCCGACGCCACCAACATCGCCACCCGCATCGAACGCGACGGCGAC
GACTACGTGATCAACGGCCGCAAATGGTGGATCACCGGCGCGATGAACCCGAACGCTCGCATCTTCATCGTGATGGGTAA
GACCGATCCGCAGGCGAGCAGGCACCGTCAGCAGTCGATGATCCTGGTCCCGCGCGACACCCCCGGCGTGGTGATCGAAC
GCGGCATGGAGGTCTTCGGCTACGACGACCACGAGCACGGCGGCCACGCCGAGATGACGTTCACCGATGTCCGCGTCCCC
GCCGCGAACCTGATCGGCGGGGAGGGTTACGGTTTCGCCATCGCGCAGGCCCGGCTCGGCCCGGGCCGCATCCACCACTG
CATGCGCGCCATCGGCGTGGCCGAACGGGCCATCGAGGCGATGTGTGCGCGCGCCGAGGAGCGGGTGGCCTTCGGCCGAC
CGCTCAGCGACCAGGGAGTGATCCGGGACTGGATCGCCGAATCGCGGGTCAAGATCGAGCAGCTGCGGCTGCTGGTGCTC
AAGACCGCGTGGCTGATGGACACCGTGGGCAACAAGGGCGCCCACACCGAGATCCAGGCGATCAAGATCGCCACGCCGGC
CACCGTGCAGTGGATTCTCGACAAGGCCATCCAGGTGCACGGCGCCGCCGGTCTGTCCCAGGACTTCTCGCTGGCCGCCG
CCTACGCGGGCAACCGCACCCTGCGCTTCGCCGATGGTCCCGACGAGGTCCACAAGAACGCGCTGGCCAAGAACGAGCTG
CGCAAGCAGCGGGACGCCCGATGA

Upstream 100 bases:

>100_bases
ATCTGCACGGCCAGACGGTCGGCGAGGGTTTCGATGTCATCGGTTCGGCGATCGAGCCGCTCCTCGAGACCGGACTCACC
GCAGTGAAGGAGTACCGCTG

Downstream 100 bases:

>100_bases
CCCTCGAGGAGCCGCGCACCAGGAGCCGCGGCTTCCTCGCCCGCCAACGATCCCGCCACCACCGAACCGGGGGAGCCCGT
TCTGGCGGGCACCGTCGCGT

Product: putative acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MDFAYDARTEELRASLLEFMDTHIYPAEPVFREQLAQLEDRWAWDSVPVLAELRAEARRRGLWNLFLPGDEGAGLTNLQY
APLAEITGRSGHLAPAVLNCAAPDTGNMEVLAQFGTEEQRTQWLEPLLDGRIRSAFAMTEPDVASSDATNIATRIERDGD
DYVINGRKWWITGAMNPNARIFIVMGKTDPQASRHRQQSMILVPRDTPGVVIERGMEVFGYDDHEHGGHAEMTFTDVRVP
AANLIGGEGYGFAIAQARLGPGRIHHCMRAIGVAERAIEAMCARAEERVAFGRPLSDQGVIRDWIAESRVKIEQLRLLVL
KTAWLMDTVGNKGAHTEIQAIKIATPATVQWILDKAIQVHGAAGLSQDFSLAAAYAGNRTLRFADGPDEVHKNALAKNEL
RKQRDAR

Sequences:

>Translated_407_residues
MDFAYDARTEELRASLLEFMDTHIYPAEPVFREQLAQLEDRWAWDSVPVLAELRAEARRRGLWNLFLPGDEGAGLTNLQY
APLAEITGRSGHLAPAVLNCAAPDTGNMEVLAQFGTEEQRTQWLEPLLDGRIRSAFAMTEPDVASSDATNIATRIERDGD
DYVINGRKWWITGAMNPNARIFIVMGKTDPQASRHRQQSMILVPRDTPGVVIERGMEVFGYDDHEHGGHAEMTFTDVRVP
AANLIGGEGYGFAIAQARLGPGRIHHCMRAIGVAERAIEAMCARAEERVAFGRPLSDQGVIRDWIAESRVKIEQLRLLVL
KTAWLMDTVGNKGAHTEIQAIKIATPATVQWILDKAIQVHGAAGLSQDFSLAAAYAGNRTLRFADGPDEVHKNALAKNEL
RKQRDAR
>Mature_407_residues
MDFAYDARTEELRASLLEFMDTHIYPAEPVFREQLAQLEDRWAWDSVPVLAELRAEARRRGLWNLFLPGDEGAGLTNLQY
APLAEITGRSGHLAPAVLNCAAPDTGNMEVLAQFGTEEQRTQWLEPLLDGRIRSAFAMTEPDVASSDATNIATRIERDGD
DYVINGRKWWITGAMNPNARIFIVMGKTDPQASRHRQQSMILVPRDTPGVVIERGMEVFGYDDHEHGGHAEMTFTDVRVP
AANLIGGEGYGFAIAQARLGPGRIHHCMRAIGVAERAIEAMCARAEERVAFGRPLSDQGVIRDWIAESRVKIEQLRLLVL
KTAWLMDTVGNKGAHTEIQAIKIATPATVQWILDKAIQVHGAAGLSQDFSLAAAYAGNRTLRFADGPDEVHKNALAKNEL
RKQRDAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI38505218, Length=403, Percent_Identity=55.8312655086849, Blast_Score=441, Evalue=1e-124,
Organism=Homo sapiens, GI48976061, Length=397, Percent_Identity=53.6523929471033, Blast_Score=422, Evalue=1e-118,
Organism=Homo sapiens, GI211971008, Length=397, Percent_Identity=53.6523929471033, Blast_Score=422, Evalue=1e-118,
Organism=Homo sapiens, GI4557233, Length=334, Percent_Identity=30.5389221556886, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI187960098, Length=411, Percent_Identity=25.5474452554745, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI4557231, Length=410, Percent_Identity=25.3658536585366, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI21361497, Length=388, Percent_Identity=26.2886597938144, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI4501859, Length=305, Percent_Identity=27.8688524590164, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI7656849, Length=297, Percent_Identity=27.9461279461279, Blast_Score=111, Evalue=9e-25,
Organism=Homo sapiens, GI226958412, Length=403, Percent_Identity=25.0620347394541, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI226958414, Length=328, Percent_Identity=25.609756097561, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI76496475, Length=394, Percent_Identity=26.9035532994924, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI4557235, Length=394, Percent_Identity=26.9035532994924, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI4501857, Length=307, Percent_Identity=26.3843648208469, Blast_Score=94, Evalue=2e-19,
Organism=Escherichia coli, GI87081958, Length=305, Percent_Identity=27.5409836065574, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786223, Length=406, Percent_Identity=23.8916256157635, Blast_Score=75, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17562446, Length=370, Percent_Identity=52.1621621621622, Blast_Score=363, Evalue=1e-101,
Organism=Caenorhabditis elegans, GI17534899, Length=405, Percent_Identity=26.6666666666667, Blast_Score=128, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI71985184, Length=339, Percent_Identity=30.3834808259587, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17570075, Length=405, Percent_Identity=25.4320987654321, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17569725, Length=412, Percent_Identity=24.7572815533981, Blast_Score=118, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI17551932, Length=294, Percent_Identity=28.9115646258503, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17505929, Length=293, Percent_Identity=29.0102389078498, Blast_Score=114, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI17508101, Length=291, Percent_Identity=28.1786941580756, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI17533517, Length=357, Percent_Identity=27.4509803921569, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71985192, Length=276, Percent_Identity=31.1594202898551, Blast_Score=104, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI17538396, Length=361, Percent_Identity=25.4847645429363, Blast_Score=104, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI17506239, Length=297, Percent_Identity=26.2626262626263, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71990804, Length=216, Percent_Identity=28.7037037037037, Blast_Score=92, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI71982178, Length=188, Percent_Identity=31.3829787234043, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI32563615, Length=194, Percent_Identity=28.8659793814433, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21356377, Length=403, Percent_Identity=27.0471464019851, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24646207, Length=293, Percent_Identity=29.0102389078498, Blast_Score=125, Evalue=7e-29,
Organism=Drosophila melanogaster, GI24660351, Length=284, Percent_Identity=28.5211267605634, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI281363737, Length=338, Percent_Identity=28.698224852071, Blast_Score=121, Evalue=8e-28,
Organism=Drosophila melanogaster, GI24666513, Length=291, Percent_Identity=27.8350515463918, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI21355753, Length=364, Percent_Identity=23.9010989010989, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI19920834, Length=292, Percent_Identity=26.027397260274, Blast_Score=72, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 45126; Mature: 45126

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFAYDARTEELRASLLEFMDTHIYPAEPVFREQLAQLEDRWAWDSVPVLAELRAEARRR
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
GLWNLFLPGDEGAGLTNLQYAPLAEITGRSGHLAPAVLNCAAPDTGNMEVLAQFGTEEQR
CCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCHHHEEECCCCCCCHHHHEECCCHHHH
TQWLEPLLDGRIRSAFAMTEPDVASSDATNIATRIERDGDDYVINGRKWWITGAMNPNAR
HHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEECCEEEEEEECCCCCCE
IFIVMGKTDPQASRHRQQSMILVPRDTPGVVIERGMEVFGYDDHEHGGHAEMTFTDVRVP
EEEEECCCCCHHHHHHCCCEEEEECCCCCHHHHCCCCEECCCCCCCCCCCEEEEEEEECC
AANLIGGEGYGFAIAQARLGPGRIHHCMRAIGVAERAIEAMCARAEERVAFGRPLSDQGV
HHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
IRDWIAESRVKIEQLRLLVLKTAWLMDTVGNKGAHTEIQAIKIATPATVQWILDKAIQVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
GAAGLSQDFSLAAAYAGNRTLRFADGPDEVHKNALAKNELRKQRDAR
CCCCCCCCHHHHEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFAYDARTEELRASLLEFMDTHIYPAEPVFREQLAQLEDRWAWDSVPVLAELRAEARRR
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
GLWNLFLPGDEGAGLTNLQYAPLAEITGRSGHLAPAVLNCAAPDTGNMEVLAQFGTEEQR
CCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCHHHEEECCCCCCCHHHHEECCCHHHH
TQWLEPLLDGRIRSAFAMTEPDVASSDATNIATRIERDGDDYVINGRKWWITGAMNPNAR
HHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEECCEEEEEEECCCCCCE
IFIVMGKTDPQASRHRQQSMILVPRDTPGVVIERGMEVFGYDDHEHGGHAEMTFTDVRVP
EEEEECCCCCHHHHHHCCCEEEEECCCCCHHHHCCCCEECCCCCCCCCCCEEEEEEEECC
AANLIGGEGYGFAIAQARLGPGRIHHCMRAIGVAERAIEAMCARAEERVAFGRPLSDQGV
HHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
IRDWIAESRVKIEQLRLLVLKTAWLMDTVGNKGAHTEIQAIKIATPATVQWILDKAIQVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
GAAGLSQDFSLAAAYAGNRTLRFADGPDEVHKNALAKNELRKQRDAR
CCCCCCCCHHHHEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]